cellular energetics Flashcards

(50 cards)

1
Q

describe the first and second laws of thermodynamics and explain why they are important to cellular energetics

A

first law: conservation of energy (energy cannot be created or destroyed only converted to other forms)
cells convert energy from one form to another, this law ensures that cells must obtain energy from their environment and convert it efficiently
Second law: entropy increases: every energy transformation increases the entropy of the universe
the processes that cells use generate heat and waste
cells must continuously expend energy to maintain order and stay alive

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2
Q

define endergonic and exergonic reactions and describe ow they are linked in cellular energetics

A

exergonic: reactions that release energy, the products have less energy than the reactants
cellular respiration
endergonic: reactions that require an input of energy to occur, the products have more free energy than the reactants
photosynthesis

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3
Q

define the basic structure of ATP, understand how it stores and releases cellular energy, and the relationship of ATP to exergonic and endergonic reactions

A

ATP structures: adenine, ribose, three phosphate groups, the high energy bonds are between ribose and three phosphate groups
stores and releases energy: it is stored in the phosphate bonds particularly between the second and third ribose, when the bond is broken ATP becomes ADP and an inorganic phosphate
relation ship of ATP to exergonic and endergonic reactions: ATP serves as a bridge between energy releasing and energy consuming reacitons

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4
Q

describe oxidation and reduction reactions and explain their relationship to endergonic and exergonic reactions

A

oxidation: loss of electrons
reduction: gain of electrons
redux reactions always occur together if one molecule is oxidized, another is reduced
exergonic: if electrons are transferred from a high energy molecule to a lower energy acceptor
endergonic: if electrons move from a low energy donor to a high energy acceptor

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5
Q

Describe the process of diffusion and the factors that influence diffusion rates

A

Diffusion is the passive movement of molecules from a higher concentration area to a lower concentration area, driven by the molecules kinetic energy
the steeper the gradient the faster the diffusion
higher temperature speeds up diffusion
smaller molecules diffuse faster than larger ones
the more permeable the membrane the faster the diffusion
a larger surface area allows for more molecules to be diffused at once
the shorter the distance the faster the diffusion
in denser solvents diffusion is slower

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6
Q

Describe selective permeability and how it influences movement of materials across plasma membranes, including what types of molecules easily pass through the membrane and which cannot.

A

selective permeability means the plasma membrane controls what enters and exists the cell, allowing some substances to pass freely while blocking or regulating others.
made of a phospholipid bilayer
phospholipids have both hydrophobic and hydrophilic tails
small non polar molecules pass easier
small uncharged polar molecules can also pass easier but to a lesser extent
molecules that cannot pass: Larger molecules, ions and charged molecules, and most polar molecules

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7
Q

Describe facilitated diffusion and active transport, the difference between them, and when the cell might use each transport type.

A

facilitated diffusion: the passive movement of molecules across the membrane with the help of membrane proteins no energy required
high to low
active transport: movement of molecules against the concentration gradient using energy from ATP
low to high

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8
Q

Describe the process of osmosis and explain how solute concentration differences across a membrane influence osmotic movement.

A

osmosis: the passive movement of water against a selectively permeable membrane from a area of lower concentration to an area of higher concentration
continues until the equilibrium is reached
no energy required
involves only water
water moves to dilute the solute

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9
Q

Describe how facilitated diffusion and active transport differ from osmosis and diffusion.

A

diffusion and osmosis: are passive, and rely only on concentration gradients
Facilitated diffusion is passive but uses proteins while active transport is energy dependent

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10
Q

Define tonicity, hypertonic, isotonic, and hypotonic and explain water movement across a plasma membrane in response to tonicity.

A

Tonicity refers to the relative concentration of solutes outside a cell compared to inside a cell, it determines the direction of water movement across the plasma membrane by osmosis
isotonic means the concentration is the same outside the cell and inside the cell
hypertonic means the concentration is higher outside the cell
hypotonic means the concentration is higher inside the cell

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11
Q

Briefly explain endocytosis and exocytosis.

A

endocytosis is the process by which a cell takes in a large molecule or particles by engulfing them within its plasma membrane creating a vesticle
exocytosis is the process by which a cell releases large molecules by fusing a vesticle with the plasma membrane spilling the contents outside

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12
Q

Name the ultimate source of energy for most life on earth and explain the role of photosynthesis in converting this energy into a form that is useable by all form of life on earth.

A

sunlight
photosynthesis converts sunlight to chemical energy

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13
Q

Write the overall equation for photosynthesis and explain the role of each of the reactants (i.e., where it comes from and what it is used for) and products (i.e., how is it formed and where it goes) in the photosynthetic process.

A

6CO₂ + 6H₂O + light energy → C₆H₁₂O₆ + 6O₂
co2 comes from the air, h2o comes from the soil, and light from the sun
glucose is used for energy and o2 is released as a byproduct

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14
Q

Describe the basic structure of a chloroplast and the function of each of the following: chlorophyll, thylakoid, stroma and granum.

A

chloroplast: where photosynthesis occurs
chlorophyll: the green pigment that absorbs light
thylakoid: membrane sacs where light reactions occur
stroma: fluid area where the Calvin cycle occuts
granum: stack of thylakoid

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15
Q

Describe how the characteristics of light (wavelength and intensity) can influence photosynthesis, including a description of which wavelengths are used by photosynthetic organisms.

A

shorter wavelengths are best for photosynthesis
high light intensity=faster photosynthesis

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16
Q

Describe what happens during the light dependent reactions, including what goes in, what comes out, and where these reactions take place.

A

occurs in thylakoid membranes, uses water and light, produces ATP NADPH and oxygen, oxygen comes from splitting water

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17
Q

Describe the basic structure of a photosystem and explain its function in the light reactions.

A

photosystem is the proteins and pigments
absorbs light and transfer electrons during light reactions

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18
Q

Explain how an electron transport chain is used in the production of ATP and NADPH in photosynthesis.

A

moves electrons through proteins in the thylakoid membranes
creates ATP and NADPH using light energy

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19
Q

Describe what happens during the Calvin Cycle (aka Calvin-Benson Cycle), including what goes in, what comes out, and where these reactions take place.

A

Occurs in: stroma
Uses: CO₂, ATP, NADPH
Produces: glucose (C₆H₁₂O₆)
Does not need light directly

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20
Q

Explain the role of the Calvin Cycle in producing carbohydrates and describe the three main stages (see the figures in the Calvin Cycle section of today’s reading).

A

makes glucose from CO2
3 main stages: carbon fixation, reduction and regeneration of RuBP

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21
Q

Describe the role of ATP and NADPH in photosynthesis, including where they are produced, where they are used, and what they are used for. Use your understanding of this objective to explain how the light dependent reactions and Calvin cycle are coupled.

A

made in light dependent reactions
used in the Calvin cycle
provides energy and electrons to build glucose

22
Q

Explain why the uptake of carbon dioxide and the release of oxygen can be used to measure rates of photosynthesis.

A

you can measure the rate of Co2 intake or o2 output
more co2 used or more o2 produced means faster photosynthesis

23
Q

Write the overall equation for respiration and explain the role of each of the reactants (i.e. where it comes from and what it is used for) and products (i.e. how it is formed and where it goes) in the respiration process.

A

C₆H₁₂O₆ + 6O₂ → 6CO₂ + 6H₂O + ATP
glucose comes from food
oxygen comes from breathing
produces ATP, CO2 and H2O

24
Q

Describe the role of NAD+, NADH, FAD, and FADH2 in respiration.

A

NAD⁺ and FAD: electron carriers
They pick up electrons and become NADH and FADH₂, which take electrons to the electron transport chain

25
Explain what happens during glycolysis (the first stage of respiration), including the purpose, where glycolysis occurs, what goes in (reactants), what comes out (products), ATP output, and where the products of glycolysis go.
Occurs in: cytoplasm Uses: glucose Produces: 2 pyruvate, 2 ATP, and 2 NADH Purpose: start breaking down glucose for energy
26
Explain what happens during oxidation of pyruvate, including the purpose, where it occurs, what goes in (reactants), what comes out (products), ATP output, and where the products of oxidation of pyruvate go.
Occurs in: mitochondria Uses: pyruvate Produces: CO₂, NADH, and acetyl-CoA Purpose: prepare for Krebs cycle
27
Explain what happens during Krebs cycle, including the purpose, where it occurs, what goes in (reactants), what comes out (products), ATP output, and where the products of Krebs cycle go.
Occurs in: mitochondrial matrix Uses: acetyl-CoA Produces: CO₂, ATP, NADH, FADH₂ Purpose: harvest more electrons for ATP production
28
Explain what happens during Oxidative Phosphorylation (OP) including the purpose, where OP is located, what goes in (reactants), what comes out (products), ATP output, and where the products of oxidative phosphorylation go.
Occurs in: inner mitochondrial membrane Uses: NADH, FADH₂, and O₂ Produces: H₂O and ~32-34 ATP Purpose: make most of the cell's ATP
29
Draw and label the internal structure of a mitochondrion and describe what happens in each of the following structures: cristae, matrix (inner compartment), and intermembrane space.
Cristae: folds where ETC happens Matrix: inner space where Krebs cycle happens Intermembrane space: space where protons build up for ATP production
30
Describe the role of oxygen and water during aerobic cellular respiration.
Oxygen: final electron acceptor in ETC Water: formed when oxygen combines with electrons and hydrogen
31
Name the source of the carbon (C) in the CO2 that is produced during cellular respiration.
Comes from the glucose molecule during pyruvate oxidation and Krebs cycle
32
Describe the differences between aerobic cellular respiration and fermentation, including the conditions under which each occurs, the number (of) ATP produced per glucose molecule and what types of organisms use each of these metabolic pathways.
aerobic: requires o2, 36-38 ATP per glucose, used by animals and plants anaerobic: no o2 required, 2 ATP per glucose, used by yeast and some bacteria
33
Explain why cells use fermentation (the conversion of pyruvate to ethanol or lactate) to complete respiratory processes when oxygen is unavailable, even though it (fermentation) does not produce additional ATP.
Lets cells make a small amount of ATP without oxygen Converts pyruvate to ethanol or lactate
34
Identify the final electron acceptor in aerobic cellular respiration and in fermentation and relate this to ATP yield.
Aerobic respiration: Oxygen (O₂) Fermentation: Organic molecule like pyruvate or acetaldehyde
35
Define the following terms used to describe organisms: obligate aerobic, obligate anaerobic, and facultative.
Obligate aerobe: needs O₂ Obligate anaerobe: poisoned by O₂ Facultative anaerobe: can live with or without O₂
36
Describe how varying conditions (e.g. temperature, sugar availability, oxygen level) can influence respiration rates in yeast.
More sugar, oxygen, or warmth = more respiration Less sugar or cold = slower respiration No oxygen = fermentation
37
Describe the purpose of cellular respiration.
To make ATP by breaking down glucose
38
Explain the relationship between photosynthesis and respiration.
Photosynthesis stores energy (glucose), respiration releases it They are opposites: photosynthesis uses CO₂ and makes O₂; respiration uses O₂ and releases CO₂
39
Track an atom of carbon from glucose through aerobic respiration to its release as CO2 from Krebs cycle
Glucose → Pyruvate → Acetyl-CoA → CO₂ CO₂ is released in the Krebs cycle
40
Describe the characteristics of bacteria and archaea, the two major groups of prokaryotes.
Both are prokaryotes (no nucleus) Bacteria have peptidoglycan in their cell walls; archaea do not Archaea often live in extreme environments
41
Describe the metabolic diversity of bacteria and archaea, focusing on the metabolic pathway known as chemosynthesis.
Bacteria and archaea can get energy from light, chemicals, or organic matter Chemosynthesis: using energy from chemical reactions (not sunlight) to make food
42
Examine the wide range of habitats where bacteria and archaea can be found.
Found everywhere: soil, water, air, skin, oceans, hot springs, deep-sea vents Archaea often live in extreme places (hot, salty, acidic)
43
Explore the roles of bacteria and archaea in the hydrothermal vent ecosystem and understand the importance of chemosynthesis in this ecosystem.
Bacteria and archaea use chemosynthesis to make food using chemicals from vents They form the base of the food chain in these dark, deep ecosystems
44
Be able to list some of the many important biological and ecological functions performed by bacteria and archaea..
Fix nitrogen, decompose dead matter, clean up oil spills, aid digestion, produce oxygen Used in making food, medicines, and biofuels
45
Describe the beneficial and harmful effects of archaea and bacteria on humans.
Helpful: aid digestion, make vitamins, fight infections, used in medicine Harmful: cause diseases like strep throat, TB, food poisoning
46
Understand the current hypothesis for evolutionary relationship among bacteria, archaea, and eukaryotes.
Archaea and eukaryotes may share a common ancestor Some believe eukaryotic cells came from a merger of ancient bacteria and archaea
47
Describe the characteristics of fungi and the generalized life cycle of fungi.
Fungi are eukaryotic, mostly multicellular (except yeast) Have cell walls made of chitin Life cycle often includes spores, mycelium (body), and reproduction by spores
48
Describe how fungi obtain nutrition and the role of fungi in ecosystems.
Fungi are decomposers — they absorb nutrients from dead or living things Important for recycling nutrients in ecosystems
49
Describe the beneficial and harmful effects of fungi on humans.
Helpful: make bread, antibiotics (penicillin), break down waste Harmful: can cause diseases (like athlete’s foot or ringworm), food spoilage
50
Describe how proteins and fats are broken down during cellular respiration to release the energy stored in these molecules.
Proteins: broken into amino acids, then modified and used in the Krebs cycle Fats: broken into glycerol and fatty acids; fatty acids enter respiration as acetyl-CoA Both release energy (ATP) when broken down