Cellular Respiration Flashcards

1
Q

catabolism / catabolic pathway

A

a metabolic pathway that releases energy by breaking down complex molecules to simpler compounds
Cellular respiration is a catabolic pathway

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2
Q

anabolic pathway (biosynthetic pathways)

A

metabolic pathway that consumes energy to build complicated molecules from simpler ones
Photosynthesis is an anabolic pathway

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3
Q

fermentation

A

breakdown of sugars or other organic fuel without oxygen

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4
Q

aerobic respiration

A

oxygen used to break down fuels

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5
Q

break down of sugars - chemical equation

A

C 6 H 12 O 6 + 6 O2 gives 6 CO2 + 6 H20 + Energy (ATP and heat)

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6
Q

how is energy created in pathways

A

transfer of electrons from one reactant to another
the relocation of electrons releases energy stored in organic molecules and this energy is ultimately used to synthesise ATP

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7
Q

redox reactions

A

chemical reaction that involve a transfer of one or more electrons from one reactant to another

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8
Q

oxidation

A

A redox reaction is one that involves the transfer of electrons from one reactant to another
Oxidation is when a substance loses electrons

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9
Q

reduction

A

Redox reactions involve the transfer of electrons from one substance to another
reduction is when electrons are added to another substance
adding electrons is called reduction - adding negatively charged electrons to an atom reduces the amount of positive charge of that atom

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10
Q

cellular respiration as a redox reaction

A

Glucose becomes oxidised to form carbon dioxide (loses the hydrogens)
the oxygen becomes reduced to form water (gains the hydrogens)
Hydrogen is transferred from glucose to oxygen

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11
Q

NAD / NADH

A

nicotinamide adenine dinucleotide (derivative of the vitamin niacin)
Electron carrier / electron shuttle
cycles between oxidised NAD to reduced NADH
functions in several of the redox steps during the breakdown of glucose

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12
Q

electron transport chain

A

the electron transport chain consists of a number of molecules, mostly proteins, built into the inner membrane of the mitochondria of eukaryotic cells.
Electrons removed from glucose are shuttled by NADH to the top higher energy end of the chain. At the bottom lower energy end oxygen captures these electrons along with hydrogen nuclei forming water

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13
Q

where is the electron transport chain located

A

in the inner membrane of the mitochondria of eukaryotic cells and the plasma membrane of respiring prokaryotes

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14
Q

how is energy released in the electron transport chain

A

multistep
electrons cascade down the chain from one carrier molecule to the next in a series of redox reactions, losing a small amount of energy with each step until they finally reach oxygen, the terminal electron acceptor

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15
Q

what is the role of oxygen in the electron transport chain

A

oxygen is very electronegative

oxygen pulls electrons down the chain

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16
Q

three stages of cellular respiration

A

glycolysis
pyruvate oxidation and the citric acid cycle (krebs)
oxidative phosphorylation - electron transport and chemiosmosis

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17
Q

where does glycolysis occur

A

in the cytosol

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18
Q

what processes occur in the mitochondria

A

pyruvate oxidation
citric acid cycle
oxidative phosphorylation - electron transport and chemiosmosis

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19
Q

how many molecules of ATP are created for each molecule of glucose

A

For each molecule of glucose degraded to carbon dioxide and water by respiration the cell makes up to 32 molecules of ATP

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20
Q

what are the two energy phases of glycolysis

A

glycolysis can be divided into two phases - the energy investment phase and the energy payoff phase
During the energy investment phase the cell spends ATP
This is paid off
The net energy yield from glycolysis, per glucose molecule, is 2 ATP plus 2 NADH

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21
Q

what happens to glucose during glycolysis

A

glucose, a six carbon sugar, is split into two three carbon sugars. these small sugars are oxidised and their remaining atoms rearranged to form two molecules of pyruvate

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22
Q

is oxygen required for glycolysis

A

glycolysis occurs whether or not oxygen is present

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23
Q

glycolysis outputs

A

2 pyruvates + 2 H20
2 ATP
2 NADH + 2H

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24
Q

how does the pyruvate enter the mitochondrion

A

pyruvate is a charged molecule so in eukaryotic cells it must enter the mitochondrion via active transport with the help of a transport protein

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25
what happens when pyruvate enters the mitochondrion
pyruvate is oxidised (electrons lost) to a compound called acetyl coenzyme A or acetyl CoA which is further oxidised in the citric acid cycle
26
what gas is released during the change from pyruvate to acetyl CoA
carbon dioxide is released. this is the first step in which carbon dioxide is released during respiration
27
what is the yield from the citric acid cycle
6 NADH 2 FADH2 and 2ATP + 2 Carbon dioxide the cycle generates 1ATP per turn but most of the chemical energy is transferred to NAD and FAD
28
NADH and FADH
Glycolysis and citric acid cycle produce only 4 ATP per glucose molecule after the CAC the molecules of NADH and FADH account for most of the energy extracted from each glucose molecule
29
structure of the electron transport chain
the ETC is a collection of molecules embedded in the inner membrane of the mitochondrion the folding of the inner membrane to form cristae increases its surface area providing space for thousands of copies of each component of the electron transport chain in a mitochondrion most components of the chain are proteins which exist in multiprotein complexes I to IV Tightly bound to these proteins are prosthetic groups - cofactors and coenzymes
30
how does the electron transport chain work
electron carriers alternate between reduced and oxidised states as they accept and then donate electrons
31
what are some of the proteins involved in the electron transport chain
``` flavoprotein iron sulphur protein ubiquinone cytochromes - contains a haem group the electron transport chain has several types of cytochromes ```
32
what happens at the end of the electron transport chain
the last protein (cytochrome) of the chain passes its electrons to oxygen which is very electronegative Each oxygen atom also picks up a pair of hydrogen ions (protons) from the aqueous solution neutralising the -2 charge of the added electrons and forming water
33
does the electron transport chain make ATP
the electron transport chain makes no ATP directly instead it eases the fall of electrons from food to oxygen breaking the energy drom into a series of smaller steps that release energy in smaller more manageable amounts
34
chemiosmosis
pumping hydrogen ions across a membrane to make ATP
35
what is ATP synthase
an enzyme that makes ATP from ADP and inorganic phosphate located in the inner membrane of the mitochondrion a molecular mill - hydrogen ions enter from the intermembrane space and bind within a rotor that changes shape and spins they hydrogen ion exits into the mitochondrial matrix turning the rod of the rotor produces ATP from ADP and P
36
Hydrogen gradient that drives ATP synthesis
As electrons move down the chain, energy is released and used to pump protons (hydrogen) out of the matrix, forming a gradient. Protons flow back into the matrix through an enzyme called ATP synthase, making ATP. At the end of the electron transport chain, oxygen accepts electrons and takes up protons to form water.
37
what would happen in cellular respiration if oxygen was not available
without the electronegative oxygen to pull electrons down the transport chain oxidative phosphorylation would cease
38
anaerobic respiration
certain prokaryotic organisms that live in environments without oxygen have an electron transport chain but do not use oxygen as the final electron acceptor at the end of the chain some sulphate reducing marine bacteria use sulphate
39
fermentation
does not use oxygen or an electron transport chain an extension of glycolysis that allows the continuous generation of ATP glycolysis plus reactions that regenerate NAD by transferring electrons from NADH to pyruvate
40
alcohol fermentation
carried out by many bacteria in anaerobic conditions yeast ( a fungus) in addition to aerobic respiration also carries out alcohol fermentation (bread) pyruvate is converted into acetaldehyde and then ethanol - carbon dioxide is released (beer)
41
lactic acid fermentation
pyruvate reduced to form lactate no carbon dioxide released lactic acid fermentation by certain fungi and bacteria is used to make cheese and yoghurt human muscle cells make ATP by lactic acid fermentation when oxygen is scarce
42
how are fermentation, anaerobic respiration and aerobic respiration similar
all use glycolysis to oxidise glucose to pyruvate with a net production of 2 ATP by substrate level phosphorylation NAD is the oxidising agent that accepts electrons during glycolysis
43
how much ATP is produced through fermentation
fermentation yields 2 molecules of ATP produced by substrate level phosphorylation in the absence of an electron transport chain the energy stored in pyruvate is unavailable (in cellular respiration pyruvate is completely oxidised (all electrons transferred) in the mitochondrion - 32 molecules of ATP
44
what organisms photosynthesise
plants algae - unicellular and multicellular e.g. kelp certain unicellular eukaryotes - e.g. euglena some prokaryotes - cyanobacteria other bacteria
45
where does photosynthesis occur
chloroplasts in leaves (mesophyll) | 1 mm squared of leaf = 500,000 chloroplasts
46
stomata
microscopic pores in a leaf | carbon dioxide enters and oxygen leaves through stomata
47
how many chloroplasts in a cell
30-40
48
structure of a chloroplast
two membranes surround the dense fluid called stroma (inner and outer membrane) third membrane system within the stroma called thylakoids inside the thylakoids is the thylakoid space (separated from the stroma) thylakoids can be stacked into grana thylakoids contain chlorophyll between the two outer membranes is the intermembrane space
49
chlorophyll
light energy absorbed by chlorophyll drives the synthesis of organic molecules in the chloroplast
50
where does the oxygen given off by plants during photosynthesis come from
derived from H2O not from CO2 | the chloroplast splits water into hydrogen and water
51
photosynthesis as a redox reaction
water is split and its electrons are transferred along with hydrogen ions from the water to the carbon dioxide reducing it to sugar
52
is photosynthesis an endergonic or exergonic reaction
the process is endergonic - it requires energy | the energy for photosynthesis comes from light
53
what are the two stages of photosynthesis
``` light reactions (photo) - occurs in the thylakoid membranes Calvin cycle (synthesis) - occurs in the stroma ```
54
why is the calvin cycle referred to as dark reactions (light independent)
do not require light | however do occur during the day because the reaction requires the NADPH and ATP made by the light reactions
55
why do we see green when we look at a leaf
chlorophyll absorbs violet blue and red light and reflects green light
56
photosystem
in the thylakoid membrane chlorophyll molecules are organised along with other small organic molecules and proteins into a complex called a photosystem composed of a reaction centre complex and a light harvesting complex
57
what are the two photosystems in the thylakoid membrane
photosystem II - P680 | photosystem I - P 700
58
what is the light harvesting complex
consists of various pigment molecules including chlorophyll a, chlorophyll b and multiple carotenoids bound to proteins the range of chlorophylls and carotenoids enables the photosystem to harvest light from a broader spectrum
59
what happens in the light harvesting complex
pigment molecule absorbs a photon energy passed from pigment molecule to pigment molecule until it is passed to a chlorophyll a molecule in the reaction centre complex
60
what happens when the electron from the light harvesting complex gets to the reaction centre complex
special pair of chlorophyll a molecules transfer one of their electrons to the primary electron acceptor
61
why are the photosystems called P680 and P700
this is the wavelength they best absorb P680 pigment is best at absorbing wavelength of 680nm (red) P700 - far red (different proteins in each account for slight differences in light absorbing properties
62
path of electrons in light reactions - linear electron flow
photon strikes pigment molecule in light harvesting complex of PS II - boosts electron electrons excite each other until one reaches P680 chlorophyll a molecules in the PSII reaction centre complex transferred to primary electron acceptor enters electron transport chain from PSII to PS I(this drives chemiosmosis) the electron enters the reaction centre of P700 exciting chlorophyll a molecules there and they become electron acceptors enter second electron transport chain through the protein ferredoxin NADP is reduced to NADPH by NADP reductase
63
chemiosmosis in photosynthesis
in Photosystem II an enzyme catalyses the splitting of water molecule into two electrons, two hydrogen ions and a oxygen atom electrons feed into the primary electron acceptor the oxygen is released and joins another oxygen to form O2 (released by leaf) the hydrogen is released into the thylakoid space (interior of the thylakoid) as electrons flow down the electron transport chain energy is released that pumps protons (hydrogens) from the stroma into the thylakoid space makes a proton gradient across the thylakoid membrane Stroma low hydrogen concentration / thylakoid space high concentration ATP is sythesised as hydrogen ions diffuse from the thylakoid space back to the stroma through ATP synthase complexes ATP forms in the stroma where it is used to help drive sugar synthesis during the calvin cycle
64
how are the citric acid cycle and the calvin cycle alike
they are both cycles | starting material is regenerated after some molecules enter and others exit the cycle
65
how are the citric acid cycle and the calvin cycle different
citric acid cycle is catabolic - breaks down molecules | calvin cycle is anabolic - makes more complex molecules out of simpler ones - builds carbohydrates
66
what occurs during the calvin cycle
carbon enters the cycle in the form of carbon dioxide and leaves as sugar the cycle spends ATP as a energy source and consumes NADPH as a reducing power (to add electrons) for adding electrons to make the sugar
67
what carbohydrate is released at the end of the calvin cycle
G3P - glyceraldehyde 3 phosphate
68
how many molecules of carbon dioxide are needed to make one molecules of G3P
3