Ch 3.3 Transcription- Mechanisms Flashcards

1
Q

Where does transcription occur in Eu and Bac

A

Eu nucleus

Bac cytoplasm

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Where does translation happen in Eu and bac

A

Eu and bac cytoplasm

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Is rna processed in Eu or bac

A

Eu yes

Bac no

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Transcription process

3

A

1) rna pol binds/ assembles at gene promoter
2) transcription starts and added downstream (+1 site / transcription start site)
3) passes through terminator then ends

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Rna pol

3

A

Reads (3-5)

Made 2 subunits

Rna pol separates dna strands, makes rna, closes dna behind it

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Promoter

2

A

Where rna pol binds/ initiate transcription

Used to bind sigma factor protien (use to recruit rna pol )

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Promoters in bac

4

A

-10, -35 refers position upstream location +1 site

1) sigma factor binds promoter recruits rna pol complex
2) rna pol separates dna strands starts adding rna nucleotides at +1 site
3) sigma factor recruits and rna pol continues down stream, make rna chain

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Holoenzyme

A

Sigma factor and rna pol

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

-10,-35 boxes

A

Define which direction the sigma factor binds and where rna pol faces when it binds

Define template strand

How tightly sigma factor binds form transcription control

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Promoters Eu

A

TATA box

Other upstream sequences called enhancers: enhance initiation of transcription

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

How to recruit rna pol in Eu

A

TATA binding protein binds tata box

Other proteins begin assemble together around it (general transcription factor)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

Basel transcription complex

A

Min protein assembly needed initiate transcription

Rna pol, TBP, general transcription factors

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Transcription start site

A

Where transcription starts in Eu

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What controls gene expression

A

Promoter

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Terminator in bac

A

Stops after terminator

Growing rna forms hairpin signal rna pol to stop and release

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Terminator Eu

A

Length after terminator transcribed varies

Multiple thing affect

17
Q

Where do Dna binding proteins bind?

A

Base pairs (especially major grove) have lots atoms for it to bind

18
Q

how strongly proteins bind to DNA determine…

A

If it’s function is successful (ex recuit) rna pol

19
Q

Transcription control can be regulated by

A

How often/ tightly Sigma factor sticks to dna promoter

20
Q

Promoter sequences

2

A

Diff sequences can bind with sigma factor more/less tightly

Not all promoters equal

21
Q

What is invoked in Eu rna processing

3

A

1) splicing
2) 5’ capping
3) poly- adenylate tails

22
Q

Splicing in Eu

3

A

Non coding introns taken out left with only exons

Coding sequence usually start/ end with exons

Sometime exons removed resulting in splice variants

23
Q

What are the 5’ cap and 3’ poly-A tail for

A

Increase stability

Help regulate transcription

Cap used for protein binding

Help export mRNA from nucleus

24
Q

Types mRNA

A

Primary

Mature: final mRNA ( needs sliceosome (rna and proteins))