chapter 14 - fermentation Flashcards

1
Q

Fermentation

A

energy conservation depends on substrate level phosphorylation

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2
Q

What are the two major challenges of fermentation?

A
  1. conserves much less energy than respiratory organisms
  2. difficult to achieve redox balance.
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3
Q

Energy rich compounds

A

contains energy rich phosphate bonds or CoA

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4
Q

What do energy rich compounds allow

A
  1. making of ATP by transferring phosphate bond to ADP by substrate level phosphorylation
  2. can produce fatty acids
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5
Q

Redox Balance

A

balancing number of atoms (reactants and products)

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6
Q

How do protons get reduced to H2 during fermentation

A
  1. hydrogenlyase
  2. hydrogenase
  3. electron configuration
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7
Q

Alcoholic fermentation

A

hexose = ethanol + CO2

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8
Q

Homolactic fermentation

A

hexose = lactate + 2H

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9
Q

Heterolactic fermentation

A

hexose = lactate + ethanol + H + CO2

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10
Q

Mechanism of homofermmentative lactic acid bacteria

A

Glucose = 2 lactate + 2H+
- delta G: -196kJ
- yields: 2 ATP

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11
Q

Mechanism of heterofermmentative lactic acid bacteria

A

Glucose = 2 lactate + ethanol + CO2 + H+
- delta G: -216 kJ
- yields: 1 ATP

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12
Q

Mechanism of mixed acid fermentation

A

2 pyruvate + NADH = 2 CO2 + butanediol

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13
Q

Mechanism of sugar fermentation by Clostridium

A

1.5 Glucose + H2O = acetate + butyrate + 3 CO2 + 4H2 + H+
- delta G: -250 kJ
- yields: 3/4 ATP/glucose

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14
Q

Obligate anaerobes

A

cant tolerate 02, produce H2 from fermentation

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15
Q

Clostridium

A
  • ferment sugars and amino acids
  • ATP synthesis through substrate level phosphorylation
  • generates proton motive force
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16
Q

Mechanism of Stickland Reaction

A

Alanine + 2 glycine + 2H2O = 3 acetate + CO2 + 3 NH4+
- delta G: -186kJ
- yields: 3 ATP

17
Q

Mechanism of energy converting Hydrogenase

A

Glucose + 2 H2O = 2 acetate + 2CO2 + 4H2 + 2H+
- delta G: -216 kJ
- yields: 4 ATP

18
Q

Secondary Fermentations

A

Uses primary fermentations as substrates

19
Q

Propionibacterium

A

Can’t produce lactic acid by itself, uses it from fermentation product of lactic acid bacteria

20
Q

Mechanism of Succinate Fermentation

A
  1. succinate is convertd to propinate through decarboxylation of intermediate
  2. this releases energy by decarboxylation reaction, used to move 2 Na+ across membrane
  3. Energy is then conserved by using a Na+ - linked ATPase
20
Q

Syntropy

A

2 different microbes cooperate to perform metabolic reaction (most secondary fermentations)

20
Q

What are the two types of electron transfer?

A
  1. Direct: two microbes connect
  2. Mediated: through diffusion (H2)
20
Q

Interspecies electron transfer

A

how microbes undergo syntropy. 1 species usually electron donor, the other, electron acceptor

21
Q

Example of interspecies H2 transfer?

A

Ethanol fermentation carried out by syntroph has positive free energy so it cant grow in pure culutres

  • H2 produced used as electron donor by methanogen to produce methane, the sum of both reactions is exergonic, when cultured both grow.
22
Oxygenase
catalyzes incorporation of O2 in organic compounds
23
Dioxygenase
incorporation of both oxygen atoms
24
Monooxygenase
Incorporation of 1 oxygen atom, the other as H2O
25
Mechanism of Hydrocarbon metabolism
1- hydrocarbon as n-octane gets oxygenated 2- alcohol as n-octanol gets dehydrogenated 3- aldehyde as n-octanal gets dehydrogenated 4- acid as n-octanoic acid
26
Importance of aromatic catabolisms?
Everything gets turned to a catechol before being reduced to enter citric acid cycle