Chapter 3: The Cellular Level of Organization Flashcards

(213 cards)

1
Q

Define a cell.

Parts of a Cell

A
  • Basic, living, structural and functional units of body.
  • Body consists of more than 100 trillion cells.

Parts of a Cell

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2
Q

What are the 3 main parts of a cell?

Parts of a Cell

A
  1. Plasma membrane.
  2. Cytoplasm.
  3. Nucleus.

Parts of a Cell

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3
Q

Define the plasma membrane of a cell.

Parts of a Cell

A
  • Cell’s flexible outer surface, separates cell’s internal environment from external environment.
  • Selective barrier, regulates flow of materials into/out of cell.
  • Helps establish/maintain environment for normal cellular activity.
  • Communication among cells and between cells and external environment.

Parts of a Cell

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4
Q

Define the cytoplasm of a cell.

Parts of a Cell

A
  • All cellular contents between plasma membrane and nucleus. Has 2 components: cytosol and organelles.
    1. Cytosol: Fluid portion of cytoplasm (intracellular fluid), contains water, dissolved solutes, suspended particles. Within cytosol are different types of organelles.
    2. Organelles: Characteristic shape, specific functions. Examples: cytoskeleton, ribosomes, endoplasmic reticulum, golgi comples, lysosomes, peroxisomes and mitochondria.

Parts of a Cell

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5
Q

Define the nucleus of a cell.

Parts of a Cell

A
  • Large organelle, houses most of cell’s DNA.
  • Within nucleus, each chromosome contains thousands of hereditary units (genes) that control most of cellular structure and function.

Parts of a Cell

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6
Q

What are the functions of the plasma membrane?

The Plasma Membrane

A
  1. Barrier separates inside and outside of cell.
  2. Controls flow of substances into/out of cell.
  3. Identifies the cell to other cells (e.g. immune cells).
  4. Participates in intracellular signaling.

The Plasma Membrane

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7
Q

What is the fluid moasic model?

The Plasma Membrane

A
  • Arrangement of lipids and proteins in plasma membrane.
  • Some proteins float, others anchored at specific locations.
  • Membrane lipids allow passage of lipid-soluble molecules but act as barrier to entry/exit of charged/polar molecules and ions into/out of cell.
  • Other proteins act as signal receptors/as molecules that link plasma membrane to intracellular/extracellular proteins.

The Plasma Membrane

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8
Q

Define the lipid bilayer.

The Plasma Membrane

A
  • Framework of plasma membrane.
  • 2 back-to-back layers made up of three types of lipid molecules: phospholipids, cholesterol and glycolipids.
  • Bilayer arrangement occurs as lipids are amphipathic molecules (have both polar and nonpolar parts).

The Plasma Membrane

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9
Q

Define phospholipids in the lipid bilayer.

The Plasma Membrane

A
  • Lipids that contain phosphorus.
  • About 75% of membrane lipids are phospholipids.

The Plasma Membrane

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10
Q

Define cholesterol in the lipid bilayer.

The Plasma Membrane

A
  • Present in smaller amounts (about 20%).
  • Steroid with attached -OH (hydroxyl) group.
  • Cholesterol molecules are weakly amphipathic, are interspersed among other lipids in both layers of membrane.

The Plasma Membrane

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11
Q

Define glycolipids in the lipid bilayer.

The Plasma Membrane

A
  • About 5% of the membrane lipids.
  • Are lipids with attached carbohydrate groups.

The Plasma Membrane

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12
Q

What are integral proteins?

The Plasma Membrane

A
  • Membrane protein that extends into/through lipid bilayer, firmly embedded into it.
  • Most are transmembrane proteins (span entire lipid bilayer, protrude into both cytosol and extracellular fluid).
  • Few integral proteins are tightly attached to one side of bilayer by covalent bonding to fatty acids.
  • Integral membrane proteins are amphipathic.

The Plasma Membrane

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13
Q

What are glycoproteins?

The Plasma Membrane

A
  • Proteins with carbohydrate groups attached to ends that protrude into extracellular fluid.
  • Carbohydrates are oligosaccharides (chains with 2 to 60 monosaccharides, may be straight or branched)

The Plasma Membrane

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14
Q

What is the glycocalyx?

The Plasma Membrane

A
  • Sugary coat formed by carbohydrate portions of glycolipids and glycoproteins.
  • Acts like molecular “signature”, enables cells to recoginize one another.
  • Eenables cells to adhere to one another in some tissues, protects cells from being digested by enzymes in extracellular fluid.
  • Hydrophilic properties of glycocalyx attract a film of fluid to surface of many cells.

The Plasma Membrane

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15
Q

What is the function of ion channels (integral) in membrane proteins?

The Plasma Membrane

A
  • Forms pore/hole which specific ion can flow across membrane.
  • Most are selective; allow only single type of ion to pass through.
  • Most plasma membranes include specific channels for several common ions.

The Plasma Membrane

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16
Q

What is the function of carriers (integral) in membrane proteins?

The Plasma Membrane

A
  • Integral proteins that act as carriers, selectively moving a polar substance/ion from one side of membrane to other.
  • Carrier proteins, known as transporters.
  • Example: amino acids, needed to synthesize new proteins, enter body cells via carriers.

The Plasma Membrane

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17
Q

What is the function of receptors (integral) in membrane proteins?

The Plasma Membrane

A
  • Integral proteins serve as cellular recoginition sites.
  • Receptor recognizes and binds specific type of molecule.
  • Specific molecule that binds to receptor is called a ligand of that receptor.
  • Recognizes specific ligand, alters cell’s function in some way. Example: Antidiuretic hormone binds to receptors in kidneys, changes water permeability of certain plasma membranes.

The Plasma Membrane

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18
Q

What is the function of enzymes (integral and peripheral) in membrane proteins?

The Plasma Membrane

A
  • Integral proteins that catalyze specific chemical reactions at inside/outside surface of cell.
  • Example: lactase protruding from epithelial cells lining small intestine splits disaccharide lactose in milk.

The Plasma Membrane

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19
Q

What is the function of linkers (integral and peripheral) in membrane proteins?

The Plasma Membrane

A
  • Anchor proteins in plasma membranes of neighboring cells to one another or to protein filaments inside/outside cell.
  • Anchors filaments inside/outside plasma membrane, provide structural stability and shape for cell.
  • Peripheral proteins also serve as enzymes and linkers.

The Plasma Membrane

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20
Q

What is the function of cell identy markers (glycoproteins) in membrane proteins?

The Plasma Membrane

A
  • Membrane glycoproteins and glycolipids often serve as cell-identity markers.

May enable cell to:
1. Recognize other cells of same kind during tissue formation.
2. Recognize/respond to potentially dangerous foreign cells. Example: ABO blood type markers.

The Plasma Membrane

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21
Q

What are some functions of peripheral proteins?

The Plasma Membrane

A
  • Help support plasma membrane.
  • Anchor integral proteins.
  • Participate in mechanical activities (ex: moving materials and organelles within cells, changing cell shape during cell division and in muscle cells, and attaching cells to one another.

The Plasma Membrane

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22
Q

Describe membrane fluidity.

The Plasma Membrane

A
  • Membrane lipids and proteins rotate/move sideways in their own half of bilayer.
  • Neighboring lipid molecules exchange places about 10 million times per second, may wander completely around cell in minutes.
  • Fluidity depends on number of double bonds in fatty acid tails of the lipids that make up bilayer, and on amount of cholesterol present.

The Plasma Membrane

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23
Q

How does membrane fluidity increase?

The Plasma Membrane

A
  • Each double bond puts “kink” in fatty acid tail, increases fluidity by preventing lipid molecules from packing tightly in membrane.

The Plasma Membrane

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24
Q

How does cholesterol effect the membrane fluidity?

The Plasma Membrane

A
  • Makes lipid bilayer stronger but less fluid at normal body temperature.
  • At low temperatures, increases membrane fluidity.

The Plasma Membrane

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25
Describe **permeable** (in relation to membrane permeability). ## Footnote The Plasma Membrane
Structure permits passage of substances through it. ## Footnote The Plasma Membrane
26
Describe **impermeable** (in relation to membrane permeability).
Structure does not permit passage of substances through it.
27
Describe **selective permeability** (in relation to membrane permeability). ## Footnote The Plasma Membrane
* Permits some substances to pass more readily than others. * Permeability of plasma membrane to different substances varies. ## Footnote The Plasma Membrane
28
Describe the **lipid bilayer** portion of plasma membranes **permeability**. ## Footnote The Plasma Membrane
* **Highly permeable** to nonpolar molecules such as oxygen (O2), carbon dioxide (CO2), steroids. * **Moderately permeable** to small, uncharged polar molecules such as water, urea (waste product from breakdown of amino acids). * **Impermeable** to ions and large, uncharged polar molecules such as glucose. * Permeability characteristics of plasma membrane is because lipid bilayer has nonpolar, hydrophobic interior. ## Footnote The Plasma Membrane
29
How do **macromolecules** pass the plasma membrane? ## Footnote The Plasma Membrane
Unable to pass across plasma membrane except by **endocytosis** or **exocytosis**. ## Footnote The Plasma Membrane
30
What is a **concentration gradient**? ## Footnote The Plasma Membrane
* Difference in concentration of a chemical from one place to another (ex: inside to outside of plasma membrane). * Example: oxygen molecules and sodium ions (Na+) are more concentrated in extracellular fluid than in cytosol. ## Footnote The Plasma Membrane
31
What is an **electrical gradient**? ## Footnote The Plasma Membrane
* Difference in electrical charges between two regions. * Inner surface of plasma membrane is more negatively charged, outer surface is more positively charged. * Occurs across plasma membrane, charge difference is called **membrane potential**. ## Footnote The Plasma Membrane
32
Why are the **concentration gradient** and **electrical grandient** important? ## Footnote The Plasma Membrane
* Help move substances across the plasma membrane. * Substance will move across plasma membrane *down its concentration gradient*. * Positively charged substance tend to move toward negatively charged area, and vice versa. ## Footnote The Plasma Membrane
33
What is an **electrochemical gradient**? ## Footnote The Plasma Membrane
Combined influence of concentration gradient and electrical gradient on movement of a particular ion. ## Footnote The Plasma Membrane
34
Define **passive processes** in transport across the plasma membrane. ## Footnote Transport across the Plasma Membrane
* Substance moves down its concentration or electrical gradient to cross membrane using only its own kinetic energy (energy of motion). * **Kinetic energy** is intrinsic to particles that are moving. No input of energy from cell. Example: Simple diffusion. ## Footnote Transport across the Plasma Membrane
35
Define **active processes** in transport across the plasma membrane. ## Footnote Transport across the Plasma Membrane
* Cellular energy is used to drive substance "uphill" against its concentration or electrical gradient. * Cellular energy used, usually form of **adenosine triphosphate** (ATP). * Another way some substances may enter/leave cells is active process, tiny, spherical membrane sacs (**vesicles**) are used. ## Footnote Transport across the Plasma Membrane
36
What is **diffusion**? ## Footnote Transport across the Plasma Membrane
* Passive process, random mixing of particles in solution occurs because of particles' kinetic energy. * Both the **solutes** (dissolved substances) and **solvent** (liquid that does dissolving), undergo diffusion. ## Footnote Transport across the Plasma Membrane
37
How does **diffusion work**? ## Footnote Transport across the Plasma Membrane
* If particular solute is present in high concentration in one area of solution and in low concentration in another area, solute molecules will diffuse towards area of lower concentration*move down their concentration gradient*. * Particles become evenly distributed throughout solution and solution is at equilibrium. Particles continue to move about randomly due to kinetic energy, but their concentrations do not change. ## Footnote Transport across the Plasma Membrane
38
What factors influence the **diffusion rate** of substances across plasma membranes? ## Footnote Transport across the Plasma Membrane
1. Steepness of concentration gradient. 2. Temperature. 3. Mass of diffusing substance. 4. Surface area. 5. Diffusion distance. ## Footnote Transport across the Plasma Membrane
39
How does **steepness of the concentration gradient** effect the diffusion rate? ## Footnote Transport across the Plasma Membrane
* Greater the difference in concentration between the 2 sides of membrane, the higher the rate of diffusion. * When charged particles are diffusing, steepness of electrochemical gradient determines diffusion rate across membrane. ## Footnote Transport across the Plasma Membrane
40
How does **temperature** effect the diffusion rate? ## Footnote Transport across the Plasma Membrane
Higher the temperature, the faster the rate of diffusion. ## Footnote Transport across the Plasma Membrane
41
How does **mass of the diffusing substance** effect the diffusion rate? ## Footnote Transport across the Plasma Membrane
The larger the mass of diffusing particle, the slower the diffusion rate. ## Footnote Transport across the Plasma Membrane
42
How does **surface area** effect the diffusion rate? ## Footnote Transport across the Plasma Membrane
* The larger the membrane surface area available for diffusion, the faster the diffusion rate. * Example: air sacs of lungs have large surface area available for diffusion of oxygen from air into blood. ## Footnote Transport across the Plasma Membrane
43
What are the **three types of diffusion**? ## Footnote Transport across the Plasma Membrane
1. Simple diffusion. 2. Facilitated diffusion. 3. Osmosis. ## Footnote Transport across the Plasma Membrane
44
What is **simple diffusion**? ## Footnote Transport across the Plasma Membrane
* Passive process, substances move freely through lipid bilayer of plasma membranes of cells without help of membrane transport proteins. * Nonpolar, hydrophobic molecules move across lipid bilayer through this process. * Such molecules include: oxygen, carbon dioxide and nitrogen gases; fatty acids; steroids; and fat-soluble vitamins (A, D, E, K). Small uncharged polar molecules such as water, urea and small alcohols. ## Footnote Transport across the Plasma Membrane
45
What is **facilitated diffusion**? ## Footnote Transport across the Plasma Membrane
* Integral membrane protein assists specific substance across membrane. * Integral membrane protein can be either a membrane channel or carrier. * Moves solutes that are too polar or too highly charged to move through lipid bilayer by simple diffusion. ## Footnote Transport across the Plasma Membrane
46
What is **channel-mediated facilitated diffusion**? ## Footnote Transport across the Plasma Membrane
* Solute moves down its concentration gradient across lipid bilayer through membrane channel. * Most membrane channels are **ion channels** (integral transmembrane proteins that allow passage of small, inorganic ions that are too hydrophilic to penetrate the nonpolar interior of the lipid bilayer). * Each ion can diffuse across membrane only at certain sites. ## Footnote Transport across the Plasma Membrane
47
What **ion channels** are common in plasma membranes? ## Footnote Transport across the Plasma Membrane
* Most numerous are selective for K+ (potassium ions) or Cl- (chloride ions). * Fewer channels are available for Na+ (sodium ions) or Ca2+ (calcium ions). ## Footnote Transport across the Plasma Membrane
48
Why is **diffusion of ions** through channels slower? ## Footnote Transport across the Plasma Membrane
* Slower than free diffusion throughout lipid bilayer because channels occupy smaller fraction of membrane's total surface area than lipids. * Facilitated diffusion through channels is still very fast process. ## Footnote Transport across the Plasma Membrane
49
How is a **channel gated** in membrane channels? ## Footnote Transport across the Plasma Membrane
* Channel protein acts as "plug" or "gate", change shape in one way to open pore, in another way to close it. * Alternate between open/closed positions. * Others regulated by chemical or electrical changes inside and outside cell. ## Footnote Transport across the Plasma Membrane
50
What is **carrier-mediated facilitated diffusion**? ## Footnote Transport across the Plasma Membrane
* Carrier (transporter) moves solute down its concentration gradient across plasma membrane. * Passive process, no cellular energy required. * Solute binds to specific carrier on one side of membrane and is released on other side after carrier undergoes change in shape. ## Footnote Transport across the Plasma Membrane
51
What is the **transport maximum**? ## Footnote Transport across the Plasma Membrane
* Number of carriers available in a plasma membrane places an upper limit on rate of which facilitated diffusion can occur. * Once all carriers are occupied, transport maximum is reached and a further increase in concentration gradient *does not* increase rate of facilitated diffusion. ## Footnote Transport across the Plasma Membrane
52
What substances move across the plasma membrane by **carrier-mediated facilitated diffusion**? ## Footnote Transport across the Plasma Membrane
Glucose, fructose, galactose and some vitamins. ## Footnote Transport across the Plasma Membrane
53
How does **glucose** cross the plasma membrane? ## Footnote Transport across the Plasma Membrane
Enters many body cells by carrier-mediated facilitated diffusion. 1. Glucose binds to specific type of carrier protein (glucose transporter (GluT)) on outside surface of membrane. 2. As transporter undergoes change in shape, glucose passes through membrane. 3. Transporter releases glucose on other side of membrane. ## Footnote Transport across the Plasma Membrane
54
What is **osmosis**? ## Footnote Transport across the Plasma Membrane
* Type of diffusion, net movement of a solvent through selectively permeable membrane. * Passive process. * In living systems, solvent is water, which moves by osmosis across plasma membranes from area of higher water concentration to area of lower water concentration. ## Footnote Transport across the Plasma Membrane
55
How do water molecules pass through the plasma membrate during **osmosis**? ## Footnote Transport across the Plasma Membrane
In two ways: 1. Moving between neighboring phospholipid molecules in lipid bilayer via simple diffusion. 2. Moving through aquaporins (or AQPs), which are integral membrane proteins that function as water channels. ## Footnote Transport across the Plasma Membrane
56
What are **aquaporins (AQPs)**? ## Footnote Transport across the Plasma Membrane
* Integral membrane proteins, function as water channels. * Play critical role in controlling water content of cells. * Responsible for production of cerebrospinal fluid, aqueous humor, tears, sweat, saliva and concentration of urine. ## Footnote Transport across the Plasma Membrane
57
When does **osmosis** occur? ## Footnote Transport across the Plasma Membrane
When a membrane is permeable to water but is *not* permeable to certain solutes. ## Footnote Transport across the Plasma Membrane
58
Define **hydrostatic pressure**. ## Footnote Transport across the Plasma Membrane
Pressure exerted by a fluid at equilibrium at any point in time due to force of gravity. ## Footnote Transport across the Plasma Membrane
59
Define **osmotic pressure**. ## Footnote Transport across the Plasma Membrane
* Osmotic pressure of a solution is proportional to concentration of solute particles that cannot cross membrane. * Higher the solute concentration, the higher the solution's osmotic pressure. ## Footnote Transport across the Plasma Membrane
60
Define a solution's **tonicity**. ## Footnote Transport across the Plasma Membrane
Measure of solution's ability to change the volume of cells by altering their water content. ## Footnote Transport across the Plasma Membrane
61
What is an **isotonic solution**? ## Footnote Transport across the Plasma Membrane
* Any solution in which a cell maintains its normal shape and volume. * Shape is maintained as there is no net water movement into or out of cells. ## Footnote Transport across the Plasma Membrane
62
What is a **hypotonic solution**? ## Footnote Transport across the Plasma Membrane
A solution that has a *lower* concentration of solutes than that inside a cell. ## Footnote Transport across the Plasma Membrane
63
What is a **hypertonic solution**? ## Footnote Transport across the Plasma Membrane
A solution that has a *higher* concentration of solutes than that inside the cell. ## Footnote Transport across the Plasma Membrane
64
Describe what happens to **RBCs** in an **isotonic solution**. ## Footnote Transport across the Plasma Membrane
* RBCs maintain their normal shape and volume. * Concentrations of solutes that cannot cross the plasma membrane are the same on both sides of membrane in this solution. * Example: 0.9% NcCl solution is isotonic for RBCs. Water molecules enter/exit at same rate. ## Footnote Transport across the Plasma Membrane
65
Describe what happens to **RBCs** in a **hypotonic solution**. ## Footnote Transport across the Plasma Membrane
* Water molecules enter cell faster than they leave, causing RBCs to swell, eventually burst. * Rupture of RBCs in this manner is called **hemolysis**. ## Footnote Transport across the Plasma Membrane
66
Describe what happens to **RBCs** in a **hypertonic solution**. ## Footnote Transport across the Plasma Membrane
* Water molecules move out of cells faster than they enter, causing cells to shrink. * Shrinkage of cells is called **crenation**. * Example of hypertonic solution: 2% NaCl ## Footnote Transport across the Plasma Membrane
67
Define **active transport**. ## Footnote Transport across the Plasma Membrane
Substance is moved across a plasma against its concentration gradient ("uphill"). Energy is required for carrier proteins to move solutes across membrane against a concentration gradient. Two sources of cellular energy can be used. 1. **Primary active transport**: Obtained from hydrolosis of ATP. 2. **Secondary active transport**: From energy stored in an ionic concentration gradient. ## Footnote Transport across the Plasma Membrane
68
Define **primary active transport**. ## Footnote Transport across the Plasma Membrane
* Energy derived from hydrolysis of ATP changes shape of carrier protein, "pumps" substance across plasma membrane against its concentration gradient. * Body expends about 40% of ATP it generates on primary active transport. ## Footnote Transport across the Plasma Membrane
69
What is the **sodium-potassium pump**? ## Footnote Transport across the Plasma Membrane
* Expels sodium ions (Na+) from cells, brings potassium ions (K+) into cell. * Part of pump acts as an ATPase (enzyme that hydrolyzes ATP), often called **Na+-K+ ATPase**. ## Footnote Transport across the Plasma Membrane
70
What is the function of the **sodium-potassium pump**? ## Footnote Transport across the Plasma Membrane
* Maintain low concentration of Na+ in cytosol by pumping these ions into extracellular fluid against Na+ concentration gradient. * Pumps move K+ into cells against K+ concentration gradient. * Maintains low concentration of Na+ and high concentration of K+ in cytosol. ## Footnote Transport across the Plasma Membrane
71
How does the **sodium-potassium pump** operate? ## Footnote Transport across the Plasma Membrane
1. Three Na+ in cytosol bind to pump protein. 2. Binding of Na+ triggers hydrolysis of ATP into ADP, reaction attaches phosphate group to pump protein. Chemical reaction changes shape of pump protein, expelling the 3 Na+ into extracellular fluid. Shape of pump protein favors binding of 2 K+ into extracellular fluid to pump protein. 3. Binding of K+ triggers release of phosphate group from pump protein. Reaction causes shape of pump protein to change. 4. As pump protein reverts to its original shape, releases K+ into cytosol. Pump is ready again to bind 3 Na+, cycle repeats. ## Footnote Transport across the Plasma Membrane
72
Define **secondary active transport**. ## Footnote Transport across the Plasma Membrane
* Energy stored in a Na+ or H+ concentration gradient is used to drive other substances across membrane against their own concentration gradients. * Indirectly uses energy obtained from hydrolysis of ATP. * Carrier protein simultaneously binds to Na+ and another substances, then changes shape so both substances cross membrane at same time. **Symporters**: Moving 2 substances in same direction. **Antiporters**: Moving 2 substances in opposite directions. ## Footnote Transport across the Plasma Membrane
73
Define a **vesicle**. ## Footnote Transport across the Plasma Membrane
* Small, spherical sac. * Variety of substances are transported from one structure to another within cells. * Import materials from and release materials into extracellular fluid. ## Footnote Transport across the Plasma Membrane
74
Define **endocytosis**. ## Footnote Transport across the Plasma Membrane
Materials move into a cell in a vesicle formed from plasma membrane. 3 types of endocytosis: 1. Receptor-mediated endocytosis 2. Phagocytosis 3. Bulk-phase endocytosis ## Footnote Transport across the Plasma Membrane
75
What is **Receptor-mediated endocytosis**? ## Footnote Transport across the Plasma Membrane
* Imports materials needed by cells. * Highly selective type of endocytosis, cells take up specific ligands (ligands are molecules that bind to specific receptors). * Vesicle forms after receptor protein in plasma membrane recognizes and binds to a particular particle in extracellular fluid. ## Footnote Transport across the Plasma Membrane
76
What is the process of **Receptor-medicated endocytosis**? ## Footnote Transport across the Plasma Membrane
1. Binding 2. Vesicle formation 3. Uncoating 4. Fusion within endosome 5. Recycling of receptors to plasma membrane 6. Degradation in lysosomes ## Footnote Transport across the Plasma Membrane
77
What occurs during **binding** in **Receptor-mediated endocytosis**? ## Footnote Transport across the Plasma Membrane
* Extracellular side of plasma membrane, LDL particle that contains cholesterol binds to specific receptor in plasma membrane to form a **receptor-LDL complex**. * Receptors are integral membrane proteins that are concentrated in regions of plasma membrane called **clathrin-coated pits**. * Protein called **clathrin** attaches to membrane on cytoplasmic side. Clathrin molecules come together, forming basketlike structure around receptor-LDL complexes that causes membrane to invaginate (fold inward). ## Footnote Transport across the Plasma Membrane
78
What occurs during **vesicle formation** in **Receptor-mediated endocytosis**? ## Footnote Transport across the Plasma Membrane
* Invaginated edges of membrane around clathrin-coated pit fuse, and a small piece of membrane pinches off. * Resulting vesicle (**clathrin-coated vesicle**), contains receptor-LDL complexes. ## Footnote Transport across the Plasma Membrane
79
What occurs during **uncoating** during **Receptor-mediated endocyctosis**? ## Footnote Transport across the Plasma Membrane
* Almost immediately after formed, clathrin-coated vesicle loses it clathrin coat to become an **uncoated vesicle**. * Clathrin molecules either return to inner surface of plasma membrane or help forms coats on other vesicles inside cell. ## Footnote Transport across the Plasma Membrane
80
What occurs during **fusion with endosome** during **Receptor-mediated endocytosis**? ## Footnote Transport across the Plasma Membrane
* Uncoated vesicle quickly fuses with vesicle known as an **endosome**. * Within an endosome, the LDL particles seperate from their receptors. ## Footnote Transport across the Plasma Membrane
81
What occurs during **recycling of receptors to plasma membrane** of **Receptor-mediated endocytosis**? ## Footnote Transport across the Plasma Membrane
* Receptors accumulate in enlongated protrusions of the endosome. * These pinch off, forming transport vesicles that return the receptors to plasma membrane. * An LDL receptor is returned to plasma membrane about 10 minutes after it enters cell. ## Footnote Transport across the Plasma Membrane
82
What occurs during **degradation in lysosomes** in **Receptor-mediated endocytosis**? ## Footnote Transport across the Plasma Membrane
* Transport vesicles, which contain LDL particles, bud off the endosome and fuse with a **lysosome (contain many digestive enzymes)**. * Certain enzymes break down large protein and lipid molecules of LDL particle into amino acids, fatty acids, cholesterol. * Smaller molecules then leave the lysosome. * Cell uses cholesterol for rebuilding membranes and for synthesis of steroids (ex. estrogen). * Fatty acids and amino acids can be used for ATP production or to build other molecules needed by the cell. ## Footnote Transport across the Plasma Membrane
83
What is **Phagocytosis**? ## Footnote Transport across the Plasma Membrane
* Form of endocytosis in which cell engulfs large solid particles, such as worn-out cells, whole bacteria, or viruses. * Only few body cells, called **phagocytes**, are able to carry out phagocytosis. * Vital defense mechanism that helps protect the body from disease. ## Footnote Transport across the Plasma Membrane
84
What are the two main types of **phagocytes**? ## Footnote Transport across the Plasma Membrane
1. **Macrophages** (located in many body tissues). 2. **Neutrophils** (a type of white blood cell). ## Footnote Transport across the Plasma Membrane
85
What is the process of **Phagocytosis**? ## Footnote Transport across the Plasma Membrane
* Particle binds to a plasma membrane receptor on phagocyte, causing it to extend **pseudopods** (projections of its plasma membrane and cytoplasm). * Pseudopods surround particle outside cell, membranes fuse to form vesicle called a **phagosome**, which enters the cytoplasm. * Phagosome fuses with one or more lysosomes, and lysosomal enzymes break down ingested material. * Any undigested materials in the phagosome remain indefinitely in a vesicle called **residual body**. * Residual bodies are then secreted by cell via exocytosis or remain stored in cell as lipofuscin granules. ## Footnote Transport across the Plasma Membrane
86
What is **Bulk-phase endocytosis**? ## Footnote Transport across the Plasma Membrane
* **Pinocytosis** or "cell drinking", form of endocytosis in which tiny droplets of extracellular fluid are taken up. * No receptor proteins are involved; all solutes dissolved in the extracellular fluid are brought into the cell. * Most body cells carry out bulk-phase endocytosis, especially absorptive cells in intestines and kidneys. ## Footnote Transport across the Plasma Membrane
87
What is the process of **Bulk-phase endocytosis**? ## Footnote Transport across the Plasma Membrane
* Plasma membrane folds inward, forms a vesicle containing droplet of extracellular fluid. * Vesicle detaches/pinches off from plasma membrane, enters cytosol. * Within cell, vesicle fuses with a lysome, where enzymes degrade engulfed solutes. * Resulting smaller molecules, such as amino acids and fatty acids, leave lysosome to be used elsewhere in cell. ## Footnote Transport across the Plasma Membrane
88
What is **Exocytosis**? ## Footnote Transport across the Plasma Membrane
Releases materials from cell. Carried out by all cells. Especially important in 2 types of cells. 1. **Secretory cells** (liberate digestive enzymes, hormones, mucus or other secretions). 2. **Nerve cells** (that release substances called neurotransmitters). In some cases, wastes are also released by exocytosis. ## Footnote Transport across the Plasma Membrane
89
What is the process of **Exocytosis**? ## Footnote Transport across the Plasma Membrane
* Membrane-enclosed vesicles called **secretory vesicles** form inside cell, fuse with plasma membrane and release their contents into extracellular fluid. * Segments of plasma membrane lost through endocytosis are recovered/recycled by exocytosis. ## Footnote Transport across the Plasma Membrane
90
How is the cells **plasma membrane** kept relatively constant? ## Footnote Transport across the Plasma Membrane
* Balance between endocytosis and exocytosis keeps the surface area of cells plasma membrane relatively constant. * Membrane exchange is quite extensive in certain cells. * In pancreas, cells that secrete digestive enzymes can recycle an amount of plasma membrane equal to cell's entire surface area in 90 minutes. ## Footnote Transport across the Plasma Membrane
91
What is **Transcytosis**? ## Footnote Transport across the Plasma Membrane
Active process, vesicles undergo endocytosis on one side of a cell, move across the cell, and then undergo exocytosis on the opposite side. ## Footnote Transport across the Plasma Membrane
92
What is the process of **Transcytosis**? ## Footnote Transport across the Plasma Membrane
* As vesicles fuse with plasma membrane, vesicular contents are released into extracellular fluid. * Occurs most often across endothelial cells that line blood vessels and is means for materials to move between blood plasma and interstitial fluid. * During pregnancy, some of Moms antibodies crosss the placenta into fetal circulation via transcytosis. ## Footnote Transport across the Plasma Membrane
93
What is the **Cytoplasm** of a cell? ## Footnote Cytoplasm
Consists of all the cellular contents between the plasma membrane and the nucleus, and has 2 components: 1. **Cytosol** 2. **Organelles** ## Footnote Cytoplasm
94
What is the **Cytosol**? ## Footnote Cytoplasm
* Intracellular fluid, the fluid portion of cytoplasm that surrounds organelles, constitutes about 55% of total cell volume. * Varies in composition and consistency from one part of a cell to another. * 75-90% water plus various dissolved and suspended components. * Among are different type of ions, glucose, amino acids, fatty acids, proteins, lipids, ATP and waste products. * The site of many chemical reactions required for a cell's existence. ## Footnote Cytoplasm
95
What is the **Cytoskeleton**? ## Footnote Cytoplasm
A network of protein filaments that extends throughout cytosol. 3 types of filaments contrubute to cytoskeleton's structure (as well as structure of other organelles). 1. **Microfilaments** 2. **Intermediate filaments** 3. **Microtubules** ## Footnote Cytoplasm
96
What are **Microfilaments** of the cytoskeleton? ## Footnote Cytoplasm
* Thinnest elements of the cytoskeleton. * Composed of the proteins actin and myosin and are most prevalent at edge of a cell. Two general functions: 1. Help generate movement 2. Provide mechanial support. ## Footnote Cytoplasm
97
What is the function of **Microfilaments**? ## Footnote Cytoplasm
* Involved in muscle contraction, cell division, cell locomotion. * Provide much of mechanical support responsible for basic strength and shapes of cells. * Anchor cytoskeleton to integral proteins in plasma membrane. * Provide mechanical support for cell extensions called **microvilli**. ## Footnote Cytoplasm
98
What are **Microvilli**? ## Footnote Cytoplasm
* Nonmotile, microscopic fingerlike projections of plasma membrane. * Within each microvillus is a core of parallel microfilaments that supports it. * Greatly increase surface area of the cell, are abundant on cells involved in absorption, such as epithelial cells that line small intestine. ## Footnote Cytoplasm
99
What are **Intermediate filaments** of the cytoskeleton? ## Footnote Cytoplasm
* Thicker than microfilaments, thinner than microtubules. * Are exceptionally strong, composted of several different proteins. * Found in parts of cells subject to mechanic stress. ## Footnote Cytoplasm
100
What is the function of **Intermediate filaments**? ## Footnote Cytoplasm
Help stabilize the position of organelles such as the nucleus and help attach cells to one another. ## Footnote Cytoplasm
101
What are **Microtubules** of the cytoskeleton? ## Footnote Cytoplasm
* Largest of cytoskeletal components. * Long, unbranches hollow tubes composed mainly of protein **tubulin**. * Assembly begins in an organelle called the centrosome. * Microtubules grow outward from centrosome toward periphery of cell. ## Footnote Cytoplasm
102
What is the function of **Microtubules**? ## Footnote Cytoplasm
* Help determine cell shape. * Function in the movement of organelles such as secretory vesicles, of chromosomes during cell division, and of specialized cell projections, such as cilia and flagella. ## Footnote Cytoplasm
103
What are the functions of the **Cytoskeleton**? ## Footnote Cytoplasm
1. Serves as a scaffold that helps determine cell's shape and organize cellular contents. 2. Aids movement of organelles within cell, of chromosomes during cell division, and of whole cells such as phagocytes. ## Footnote Cytoplasm
104
What are **Organelles**? ## Footnote Cytoplasm
* Specialized structures within cell that have characteristic shapes, and perform specific functions in cellular growth, maintenance, and reproduction. * Is little interference among chemical reactions in a cell as they are confined to different organelles. ## Footnote Cytoplasm
105
What are the functions of **Organelles**? ## Footnote Cytoplasm
* Each type of organelle has its own set of enzymes that carry out specific reactions. * Serves as functional compartment for specific biochemical processes. * Cooperate to maintain homeostasis. * The nucleus is a large organelle. ## Footnote Cytoplasm
106
What is a **Centrosome**? ## Footnote Cytoplasm
Also called microtubule organizing center, located near the nucleus, consists of 2 components. 1. A pair of centrioles 2. The pericentriolar matrix * During cell division, centrosomes replicate so succeeding generations of cells have capacity for cell division. ## Footnote Cytoplasm
107
What are the **Centrioles**? ## Footnote Cytoplasm
* The 2 centrioles are cylindrical structures, each composed of nine clisters of three microtubules (triplets) arranged in a circular pattern. * Long axis of one centriole is at a right angle to the long axis of the other. ## Footnote Cytoplasm
108
What is the **Pericentriolar matrix**? ## Footnote Cytoplasm
* Surrounds the centrioles. * Contains hundreds of ring-shaped complexes composed of protein **tubulin**. * Tubulin complexes are organizing centers for growth of mitotic spindle, which plays critical role in cell division, and for microtubule formation in nondividing cells. ## Footnote Cytoplasm
109
What are the functions of the **Centrosomes**? ## Footnote Cytoplasm
1. The perocentriolar matrix of centrosome contains tubulins that build microtubules into nondividing cells. 2. The pericentriolar matrix of centrosome forms the mitotic spindle during cell division. ## Footnote Cytoplasm
110
What are **Cilia**? ## Footnote Cytoplasm
* Motile projections of the cell surface. * Numerous, short, hairlike projections, extend from surface of the cell. * Each cilium contains a core of 20 microtubules surrounded by plasma membrane. * Anchored to basal body just below surface of the plasma membrane. ## Footnote Cytoplasm
111
How does the **Cilia** function? ## Footnote Cytoplasm
* Displays oarlike pattern of beating, relatively stiff during power stroke, more flexible during recovery stroke. * Coordinated movement of many cilia on surface of a cell causes steady movement of fluid along cell surface. * Cells of respiratory tract have hundreds of cilia that sweep foreign particles trapped in mucus away from lungs. ## Footnote Cytoplasm
112
What are **Flagella**? ## Footnote Cytoplasm
* Used to move an entire cell. * Generates forward motion along its axis by rapidly wiggling in wavelike patern. * Only example in human body is a sperm cell tail. ## Footnote Cytoplasm
113
What are the functions of **Cilia** and **Flagella**? ## Footnote Cytoplasm
1. Cilia moves fluids along a cell's surface. 2. A flagellum moves an entire cell. ## Footnote Cytoplasm
114
What are **Ribosomes**? ## Footnote Cytoplasm
* The sites of protein synthesis. * High content of one type of ribonucleic acid (ribosomal RNA, or rRNA), but each ribosome includes more than 50 proteins. * Structurally, consists of 2 subunits, large and small subunits. * Also located within mitochondria, where they synthesize mitochondrial proteins. ## Footnote Cytoplasm
115
What are the large and small subunits of **Ribosomes**? ## Footnote Cytoplasm
* Made separately in the nucleolus, a spherical body inside the nucleus. * Once produced, large and small subunits exit the nucleus separately, then come together in cytoplasm. ## Footnote Cytoplasm
116
What are the functions of **Ribosomes**? ## Footnote Cytoplasm
1. Ribosomes associated with endoplasmic reticulum synthesize proteins destined for insertion in the plasma membrane or secretion from the cell. 2. Free ribosomes synthesize proteins used in the cytosol. ## Footnote Cytoplasm
117
What is the **Endoplasmic reticulum**? ## Footnote Cytoplasm
* Network of membranes in form of flattened sacs or tubules. * Extends from nuclear envelope, to which it is connected and projects throughout the cytoplasm. * Extensive, constitutes more than half of membranous surfaces within cytoplasm of most cells. ## Footnote Cytoplasm
118
What are the two different forms of **Endoplasmic reticulum**? ## Footnote Cytoplasm
1. Rough endoplasmic reticulum 2. Smooth endoplasmic reticulum ## Footnote Cytoplasm
119
What is **Rough endoplasmic reticulum**? ## Footnote Cytoplasm
* Continuous with nuclear membrane and usually is folded into series of flattened sacs. * Outer surface is studded with ribosomes (sites of protein synthesis). ## Footnote Cytoplasm
120
What is the function of **Rough endoplasmic reticulum**? ## Footnote Cytoplasm
* Synthesizes glycoproteins and phospholipids. * Produces secretory proteins, membrane proteins, and many organellar proteins. * Proteins synthesized by ribosomes attached to rough ER enter spaces within ER for processing, sorting. Some cases, enzymes attach proteins to carbohydrates, form glycoproteins. ## Footnote Cytoplasm
121
What is **Smooth endoplasmic reticulum**? ## Footnote Cytoplasm
* Extends from rough ER to form network of membrane tubules. * Does not have ribosomes on outer surfaces of its membrane. * Contains unique enzymes that make it functionally more diverse. * Does not synthesize proteins. ## Footnote Cytoplasm
122
What is the function of **Smooth endoplasmic reticulum**? ## Footnote Cytoplasm
* Synthesize fatty acids and steroids (ex. estrogen and testosterone). * Liver cells: enzymes of smooth ER help release glucose into blood, inactivate/detoxify lipid-soluble drugs or harmful substances. * Liver, kidney, intestinal cells: enzyme removes phosphate group from glucose-6 phosphate, allows free glucose to enter blood. Releases calcium ions that trigger contraction in muscle cells. ## Footnote Cytoplasm
123
What is the **Golgi Complex**? ## Footnote Cytoplasm
* An organelle. * Consists of 3-20 **cisterns**, small, flattened membranous sacs with bulging edges. * Cisterns are often curved, giving a cuplike shape. * Most cells have several Golgi complexes, more extensive in cells that secrete proteins. ## Footnote Cytoplasm
124
What are the functions of the **Golgi complex**? ## Footnote Cytoplasm
1. Modifies, sorts, packages, and transports proteins received from rough ER. 2. Forms secretory vesicles that discharge processed proteins via exocytosis into extracellular fluid. 3. Forms membrane vesicles that ferry new molecules to plasma membrane. 4. Forms transport vesicles that carry molecules to other organelles, such as lysosomes. ## Footnote Cytoplasm
125
What are the **cisterns** of the **Golgi complex**? ## Footnote Cytoplasm
* Cisterns at opposite ends of Golgi complex differ in size, shape, enzyme activity. * Convex **entry (cis) face** is a cistern that faces rough ER. * Concave **exit (trans) face** is a cistern that faces plasma membrane. * Sacs between entry and exit faces are called **medial cisterns**. * Transport vesicles from ER merge to form entry face. From entry face, cisterns are thought to mature, in turn becoming medial and then exit cisterns. ## Footnote Cytoplasm
126
What is the **process** in which proteins enter, pass through and exit the **Golgi complex**? ## Footnote Cytoplasm
1. Entry face received and modifies proteins produced by rough ER. 2. Medial cisterns add carbohydrates to proteins to form glycoproteins and lipids to proteins to form lipoproteins. 3. Exit face modifies molecules further and then sorts and packages them for transport to destinations. ## Footnote Cytoplasm
127
Describe the **process of maturation of the cisternae** and exhanges that occur via transfer vesicles within the **Golgi complex**. ## Footnote Cytoplasm
1. Proteins synthesized by ribosomes on rough ER are surrounded by a piece of ER membrane, buds from membrane surface to form transport vesicles. 2. Transport vesicles move toward entry face of Golgi complex. 3. Fusion of several transport vesicles creates entry face of Golgi complex, releases proteins into its lumen. 4. Proteins move from entry face into one or more medial cisterns. Enzymes in medial cisterns modify proteins to form glycoproteins, glycolipids, and lipoproteins. Transfer vesicles that bud from edges of cisterns move specific enzymes back toward the entry face and move some partially modified proteins toward exit face. 5. Products of medial cisterns move into lumen of exit face. 6. Within exit face cistern, products are further modified, sorted and packaged. 7. Some of processed proteins leave exit face, are stored in secretory vesicles. These vesicles deliver proteins to plasma membrane, where they are discharged by exocytosis into extracellular fluid. 8. Other processed proteins leave exit face in membrane vesicles, deliver contents to plasma membrane for incorporation into membrane. Golgi complex adds new segments of plasma membrane as existing segments are lost and modifies number and distribution of membrane molecules. 9. Some processed proteins leave exit face in transport vesicles that will carry proteins to another cellular destination. ## Footnote Cytoplasm
128
What are the 3 general destinations for proteins that leave the **Golgi complex**? ## Footnote Cytoplasm
1. Lysosomes 2. Plasma membrane 3. Secretion ## Footnote Cytoplasm
129
What are **Lysosomes**? ## Footnote Cytoplasm
* Membrane-enclosed vesicles that form from Golgi complex. * Contain as many as 60 kinds of powerful digestive and hydrolytic enzymes, can break down variety of molecules once lysosomes fuse with vesicles formed from endocytosis. * Work best at an acidic pH, lysosomal membrane includes active transport pumps that import hydrogen ions, thus, lysosomal interior has pH of 5. ## Footnote Cytoplasm
130
What are the functions of **Lysosomes**? ## Footnote Cytoplasm
1. Digest substances that enter cell via endocytosis and transport final products of digestion into cytosol. 2. Carry out autophagy (digestion of worn-out organelles). 3. Implement autolysis (digestion of entire cell). 4. Accomplish extracellular digestion. ## Footnote Cytoplasm
131
How do **Lysosomes** participate in **autophagy**? ## Footnote Cytoplasm
* Organelle to be digested is enclosed by membrane derived from the ER to create a vesicle called **autophagosme**. * Vesicle then fuses with a lysosome. Lysosomal enzymes help recycle worn-out cell structures. * Can engulf another organelle, digest it and return digested components to the cytosol for reuse. * Enzymes may destroy entire cell that contains them, called **autolysis**. ## Footnote Cytoplasm
132
What are **Peroxisomes**? ## Footnote Cytoplasm
* Group of organelles, smaller than lysosomes. * Also called microbodies. * Contain several oxidases, enzymes that can oxidize various organic substances. * Amino acids and fatty acids are oxidized in peroxisomes as part of normal metabolism. * Enzymes in peroxisomes oxidize toxic substances. * Abundant in the liver. ## Footnote Cytoplasm
133
How do **Peroxisomes** protect the cell from the by-product of oxidation? ## Footnote Cytoplasm
* Peroxisomes contain the enzyme catalase, which decomposes H2O2 (hydrogen peroxide). * Production and degradation of H2O2 occur within the same organelle, peroxisomes protect other parts of cell from toxic effects of H2O2. * Peroxisomes also contain enzymes that destroy superoxide. ## Footnote Cytoplasm
134
What are **Proteasomes**? ## Footnote Cytoplasm
* Tiny barrel-shaped structures consisting of four stacked rings of proteins around a central core. * Provide continuous destruction of unneeded, damaged or faulty proteins. * Typical body cell contains thousands of proteasomes, in cytosol and nucleus. * Contain myriad **proteases** (enzymes that cut proteins into small peptides). * Once enzymes of proteasome have chopped up protein into smaller chunks, other enzymes break down the peptides into amino acids, which can be recycled into new proteins. ## Footnote Cytoplasm
135
What is the **Mitochondria**? ## Footnote Cytoplasm
* "Powerhouses" of the cell. * Generate most of the ATP through aerobic respiration. * Cell can have hundreds or thousands of mitochondria, depending on its activity. * Active cells that use ATP at high rates (muscles, liver, kidneys) have large number of mitochondria. * Usually located within cell where oxygen enters the cell or where the ATP is used. ## Footnote Cytoplasm
136
What are the functions of **Mitochondria**? ## Footnote Cytoplasm
1. Generate ATP through reactions of aerobic cellular respiration. 2. Play an important early role in apoptosis. ## Footnote Cytoplasm
137
Describe the structure of **Mitochondria**. ## Footnote Cytoplasm
* Mitochondrion consists of external mitochondrial membrane and internal mitochondrial membrane with small fluid-filled space between. * Both membranes are similar in structure to plasma membrane. * Internal mitochondrial membrane contains series of folds called **mitochondrial cristae**. * Central fluid-filled cavity of a mitochondrion, enclosed by internal mitochonrial membrane, the **mitochondrial matrix**. * Elaborate folds of the cristae provide enormous surface afea for chemical reactions that are part of the aerobic phase of cellular respiration (the reactions that produce most of a cell's ATP). ## Footnote Cytoplasm
138
What is **Apoptosis**? ## Footnote Cytoplasm
Is the orderly, genetically progreammed death of a cell. ## Footnote Cytoplasm
139
How does **Apoptosis** work? ## Footnote Cytoplasm
* Response to stimuli, certain chemicals are released from mitochondria following formation of pore in outer mitochondrial membrane. * One of chemicals released into cytosol of cell is cytochrome c, which while inside mitochondria, is involved in aerobic cellular respiration. * In cytosol, cytochrome c and other substances initiate a cascade of activation of protein-digesting enzymes that bring about apoptosis. ## Footnote Cytoplasm
140
Describe **Mitochondria DNA**. ## Footnote Cytoplasm
* Mitrochondria have their own DNA, in form of multiple copies of a circular DNA molecule that contains 37 genes. * Mitochondrial genes control synthesis of 2 ribosomal RNAs, 22 transfer RNAs, and 13 proteins that build mitochondrial components. * Mitochondrial genes are inherited only from mother. ## Footnote Cytoplasm
141
What is the **Nucleus**? ## Footnote Nucleus
* Spherical or oval-shaped structure, usually most prominent feature of a cell. * Most cells have a single nucleus, although some, such as mature red blood cells, have none. * Skeletal muscle cells and other types of cells have multiple nuclei. ## Footnote Nucleus
142
What is the **nuclear envelope**? ## Footnote Nucleus
* Double membrane that separates nucleus from cytoplasm. * Both layers of nuclear envelope are lipid bilayers similar to plasma membrane. * Outer membrane of nuclear envelope is continuous with rough ER and resembles it in structure. ## Footnote Nucleus
143
What are **nuclear pores**? ## Footnote Nucleus
* Many openings that extend through the nuclear envelope. * Each nuclear pore consists of circular arrangement of proteins surrounding large central opening that is about 10 times wider than the pore of a channel protein in plasma membrane. ## Footnote Nucleus
144
What is the function of **nuclear pores**? ## Footnote Nucleus
* Control the movement of substances between nucleus and cytoplasm. * Small molecules and ions move through pores passively by diffusion. * Most lage molecules, such as RNAs and proteins, cannot pass through nuclear pores by diffusion. Instead, involves active transport process, molecules are recognized and selectively transported through nuclear pore into or out of nucleus. ## Footnote Nucleus
145
What are **nucleoli**? ## Footnote Nucleus
* Spherocal bodies inside the nucleus that function in producing ribosomes. * Each nucleolus is a cluster of protein, DNA and RNA; it is **not** enclosed by a membrane. ## Footnote Nucleus
146
What is the function of **nucleoli**? ## Footnote Nucleus
* Sites of synthesis of rRNA and assembly of rRNA and proteins into ribosomal subunits. * Are prominent in cells that synthesize large amounts of protein (muscle and liver cells). * Nucleoli disperse and disappear during cell division and reorganize once new cells are formed. ## Footnote Nucleus
147
What are **genes**? ## Footnote Nucleus
* Cell's hereditary units, control cellular structure and direct cellular activities. * Arranged along chromosomes. * Human somatic (body) cells have 46 chromosomes, 23 inherited from each parent. * Each chromosome is a long molecule of DNA that is coiled together with several proteins. ## Footnote Nucleus
148
What is a **genome**? ## Footnote Nucleus
The total genetic information carried in a cell or an organism. ## Footnote Nucleus
149
What is **chromatin**? ## Footnote Nucleus
* A complex of nucleic acids (DNA or RNA) and proteins (e.g. histones). * In cells that are not dividing, chromatin appears as a diffuse, granular mass. * Has a beads-on-a-string structure. ## Footnote Nucleus
150
What is a **nucleosome**? ## Footnote Nucleus
* The basic repeating subunit of chromatin packaged inside the cell’s nucleus. * Each bead of chromatin string structure is a neuleosome that consists of double-stranded DNA wrapped twice around a core of eight proteins called histones, which help organize the coiling and folding of DNA. ## Footnote Nucleus
151
What are the functions of the **Nucleus**? ## Footnote Nucleus
1. Controls cellular structure. 2. Direct cellular activities. 3. Produces ribsomes in nucleoli. ## Footnote Nucleus
152
What is a **Proteome**? ## Footnote Protein Synthesis
Refers to all of an organism's proteins. ## Footnote Protein Synthesis
153
What is **Gene expression**? ## Footnote Protein Synthesis
* Gene's DNA is used as template for synthesis of a specific protein. * First, information encoded in a specific region of DNA is transcribed to produce a specific mole of RNA (transcription). * Second, RNA attaches to ribosome, where information contained in RNA is translated into corresponding sequence of amino acids to form a new protein molecule (translation). ## Footnote Protein Synthesis
154
What is a **base triplet of DNA**? ## Footnote Protein Synthesis
* Sequence of three nucleotides in DNA, where genertic information is stored in sets of three nucleotides. * Each DNA base triplet is transcribed as a complementary sequence of three nucleotides, called a codon. * A given codon specifies a particular amino acid. ## Footnote Protein Synthesis
155
What is a **Genetic code**? ## Footnote Protein Synthesis
Set of rules that relate the base triplet sequence of DNA to corresponding condons of RNA and amino acids they specify. ## Footnote Protein Synthesis
156
What is **transcription** of DNA? ## Footnote Protein Synthesis
Occurs in nucleus, genetic information represented by the sequence of base triplets in DNA serves as template for copying information into a complementary sequence of codons. Genetic information in DNA is copied to RNA. 3 types of RNA are made from DNA template: 1. **Messenger RNA** (mRNA). 2. **Ribosomal RNA** (rRNA). 3. **Transfer RNA** (tRNA). ## Footnote Protein Synthesis
157
What is the purpose of **Messenger RNA (mRNA)**? ## Footnote Protein Synthesis
Directs the synthesis of a protein. ## Footnote Protein Synthesis
158
What is the purpose of **Ribosomal RNA (rRNA)**? ## Footnote Protein Synthesis
Joins with ribosomal proteins to make ribosomes. ## Footnote Protein Synthesis
159
What is the purpose **Transfer RNA (tRNA)**? ## Footnote Protein Synthesis
* Binds to amino acid, holds it in place on ribosome unit, incorporated into a protein during translation. * One end of tRNA carries a specific amino acid, and the opposide end consists of a triplet of nucleotides called anticodon. * By pairing between complementary bases, tRNA anticodon attaches to mRNA codon. ## Footnote Protein Synthesis
160
What is the **RNA polymerase**? ## Footnote Protein Synthesis
* Enzyme that catalyzes transcription of DNA. * Enzyme must be instructed where to start transcription process and where to end it. * Only one of two DNA strands serves as a template for RNA synthesis. ## Footnote Protein Synthesis
161
What is a **promoter** of DNA transcription? ## Footnote Protein Synthesis
* Segment of DNA where transcription begins, a special nucleotide sequence. * Promoter is located near beginning of a gene. * This is where RNA polymerase attaches to the DNA. ## Footnote Protein Synthesis
162
During **transcription**, what bases in the DNA pair with RNA? ## Footnote Protein Synthesis
**DNA Template** / **RNA Strand** Adenine (A) pairs with Uracil (U) Thymine (T) pairs with Adenine (A) Guanine (G) pairs with Cytosine (C) Cytosine (C) pairs with Guanine (G) ## Footnote Protein Synthesis
163
What is the **terminator** of DNA transcription? ## Footnote Protein Synthesis
* Special nucleotide sequence, which specifies the end of the gene. * When RNA ploymerase reaches terminator, enzyme detaches from transcribed RNA molecule and DNA strand. ## Footnote Protein Synthesis
164
What are **introns** within a gene? ## Footnote Protein Synthesis
Regions that **do not** code for parts of a protein. ## Footnote Protein Synthesis
165
What are **exons** within a gene? ## Footnote Protein Synthesis
Regions that **do** code for segments of a protein. ## Footnote Protein Synthesis
166
What is **translation**? ## Footnote Protein Synthesis
* Nucleotide sequence in an mRNA molecule specifies amino acid sequence of a protein. * Ribosomes in cytoplasm carry out translation. * mRNA molecule binds to a ribosome. Then, mRNA nucleotide sequence specifies the amino acid sequence of a protein. ## Footnote Protein Synthesis
167
What is the process of **translation**? ## Footnote Protein Synthesis
1. mRNA molecule binds to small ribosomal subunit at mRNA binding site. Special tRNA (initiator tRNA) binds to start codon (AUG) on mRNA where translation begins. tRNA anticodon (UAC) attaches to mRNA codon (AUG) by pairing between complementary bases. AUG is also the codon for amino acid methionine, thus methionine is always first amino acid in growing polypeptide. 2. Large ribosomal subunit attaches to small ribosomal subunit-mRNA complex, creating functional ribosome. Initiator tRNA with its amino acid(methionine), fits into P site of ribosome. 3. Anticodon of another tRNA with its attached amino acid pairs with second mRNA codon at A site of ribosome. 4. Component of large ribosomal subunit catalyzes formation of peptide bond between methionine and the amino acid carried by the tRNA at the A site. 5. Following formation of peptide bond, resulting two peptide protein becomes attached to tRNA at A site. 6. After peptide bond formation, ribosome shifts mRNA strand by one codon. tRNA in the P site enters E site and is released from ribosome. tRNA in A site bearing the 2 peptide protein shifts into P site, allowing tRNA with its amino acid to bind to newly exposed codon at A site. Steps 3-6 occur repeatedly and protein legthens progressively. 7. Protein synthesis ends when ribosome reaches stop codon at A site, causes completed protein to detach from final tRNA. Also, tRNA vacates P site and ribosome splits into its large and small subunits. ## Footnote Protein Synthesis
168
At what rate does **protein synthesis** occur? ## Footnote Protein Synthesis
* About 15 peptide bonds per second. * As ribosome moves along mRNA, before it completes synthesis of whole protein, another ribosome may attach behind it and begin translation of same mRNA strand. ## Footnote Protein Synthesis
169
What is a **polyribosome**? ## Footnote Protein Synthesis
* Several ribosomes that are attached to same mRNA molecule. * Simultaneous movement of several ribosomes along same mRNA molecule permits translation of one mRNA into several identical proteins at same time. ## Footnote Protein Synthesis
170
What is **cell division**? ## Footnote Cell Division
The process by which cells reproduce themselbes. Two types of cell division: 1. **Somatic cell division** 2. **Reproductive cell division** ## Footnote Cell Division
171
What is a **somatic cell**? ## Footnote Cell Division
Is any cell of the body other than a germ cell. ## Footnote Cell Division
172
What occurs during **somatic cell division**? ## Footnote Cell Division
* Cell undergoes nuclear division called **mitosis** and a cytoplasmic division called **cytokinesis**, to produce two genetically identical cells, each with the same number and kind of chromosomes as original cell. * Replaces dead/injured cells and adds new ones during tissue growth. ## Footnote Cell Division
173
What is a **germ cell**? ## Footnote Cell Division
A gamete (sperm or oocyte) or any precursor cell destined to become a gamete. ## Footnote Cell Division
174
What occurs during **reproductive cell division**? ## Footnote Cell Division
* Mechanism that produces gametes, cells needed to form next generation of sexually reproducing organisms. * Consists of a special 2-step division called meiosis, in which the number of chromosomes in the nucleus is reduced by half. ## Footnote Cell Division
175
What events occur during the **somatic cell cycle**? ## Footnote Cell Division
**Intraphase**: G1 phase, S phase, G2 phase. **Mitotic Phase**: Mitosis, Prophase, Metaphase, Anaphase, Telophase, Cytokinesis. ## Footnote Cell Division
176
What is the **cell cycle**? ## Footnote Cell Division
* Orderly sequence of events in which a somatic cell duplicates its contents and divides into two. * Some cells divide more than others. ## Footnote Cell Division
177
What are **homologous chromosomes**? ## Footnote Cell Division
* Two chromosomes that makeup each pair (homologs). * Contain similar genes arranged in the same (or almost the same) order. * Human cells contain 23 pairs of chromosomes, for a total of 46. ## Footnote Cell Division
178
What are **sex chromosomes**? ## Footnote Cell Division
One pair of chromosomes, designated X and Y. **Females**: homologous pair of sex chromosomes consists of 2 large X chromosomes **Males**: pair consists of an X and a much smaller Y chromosome. ## Footnote Cell Division
179
What is a **diploid cell**? ## Footnote Cell Division
Cells that contain two sets of chromosomes. Also called (2n) cells. ## Footnote Cell Division
180
What is **interphase** of cell division? ## Footnote Cell Division
* Process where cell replicates its DNA. * Produces additional organelles and cytosolic components in anticipation of cell division. * A state of high metabolic activity; it is during this time that cell does most of its growing. * Consists of 3 phases: **G1**, **S** and **G2**. ## Footnote Cell Division
181
What is the **G1 phase** of cell division? ## Footnote Cell Division
* Interval between mitotic phase and S phase. * Cell is metabolically active; replicates most of its organelles and cytosolic componenets but not DNA. * Replication of centrosomes begins. * For cell with total cell cycle time of 24 hours, G1 lasts 8-10 hours, duration is variable. Very short in embroyonic cells and cancer cells. ## Footnote Cell Division
182
What is the **G0 phase** of cell division? ## Footnote Cell Division
* Cells that remain in G1 for very long time, perhaps destined never to divide again. * Most nerve cells are in the G0 phase. ## Footnote Cell Division
183
What is the **S phase** of cell division? ## Footnote Cell Division
* DNA replication and centrosome replication occurs. * Interval between G1 and G2, lasts about 8 hours. * Once cell enters S phase, is committed to go through rest of cell cycle. * As result of DNA replication, 2 identical cells formed during cell division later in cell cycle will have the same genetic material. ## Footnote Cell Division
184
What is the **G2 phase** of cell division? ## Footnote Cell Division
* Interval between S phase and mitotic phase. * Lasts 4-6 hours. * Cell growth continues, enzymes and other proteins are synthesized in preparation for cell division, and replication of centrosomes is completed. ## Footnote Cell Division
185
What is the **mitotic (M) phase** of cell division? ## Footnote Cell Division
* Results in formation of two identical cells. * Consists of nuclear division (mitosis) and cytoplasmic division (cytokinesis) to form two identical cells. * These events are visable under microscope. ## Footnote Cell Division
186
What is **mitosis** of cell division? ## Footnote Cell Division
The distribution of two sets of chromosomes into two separate nuclei. Process results in exact partitioning of genetic information. A continuous process; one stage merges seamlessly into the next. Divided into 4 stages: 1. **Prophase** 2. **Metaphase** 3. **Anaphase** 4. **Telophase** ## Footnote Cell Division
187
What is **prophase** of cell division? ## Footnote Cell Division
* Chromatin fibers condense into paired chromatids. * Nucleolus and nuclear envelope disappear. * Each centrosome moves to an opposite pole of the cell. * Process can be seen under light microscope. ## Footnote Cell Division
188
What is a **centromere**? ## Footnote Cell Division
* Constricted region which holds chromatid pair together during cell division. * At the outside of each centromere is protein complex known as the **kinetochore**. ## Footnote Cell Division
189
What is the **mitotic spindle**? ## Footnote Cell Division
* Football-shaped assembly of microtubules that attach to the kinetochore. * Responsible for separation of chromatids to opposite poles of the cell. ## Footnote Cell Division
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What is **metaphase** of cell division? ## Footnote Cell Division
Centromeres of chromatid pairs line up at metaphase plate. ## Footnote Cell Division
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What is anaphase of **cell division**? ## Footnote Cell Division
* Centromeres split; identical sets of chromosomes move to opposite poles of cell. * When separated, chromatids are termed chromosomes. * Chromosomes appear V-shaped because centromeres lead way, dragging trailing arms of chromosomes toward the pole. ## Footnote Cell Division
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What is **telophase** of cell division? ## Footnote Cell Division
* Nuclear envelopes and nucleoli reappear; chromosomes resume chromatin form; mitotic spindle disappears. * Final stage of mitosis. Begins after chromosomal movement stops. * Identical sets of chromosomes uncoil and revert to threadlike chromatin form. * Nuclear envelope forms around each chromatin mass, nucleoli reappear in indentical nuclei and mitotic spindle breaks up. ## Footnote Cell Division
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What is **cytokinesis**? ## Footnote Cell Division
* Division of a cells cytoplasm and organelles into two identical cells. * Usually beings in late anaphase with formation of a cleavage furrow (slight indentation of the plasma membrane) and is completed after telophase. * Cleavage furrow divides cytoplasm into separate and equal portions. * When complete, interphase begins. ## Footnote Cell Division
194
What are the different **destinies of a cell**? ## Footnote Cell Division
A cell has 3 possible destinies: 1. Remain alive and functioning without dividing. 2. Grow and divide. 3. To die. Homeostasis is maintained when there is balance between cell proliferation and cell death. ## Footnote Cell Division
195
What is **apoptosis**? ## Footnote Cell Division
A normal type of cell death. ## Footnote Cell Division
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What is **necrosis**? ## Footnote Cell Division
* Pathological type of cell death that results from tissue injury. * Adjacent cells swell, burst, and spill their cytoplasm into interstitial fluid. * The cellular debris usually stimulates inflammatory response by immune system, a process that **does not** occur in apoptosis. ## Footnote Cell Division
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What is **meiosis** in reproductive cell division? ## Footnote Cell Division
The reproductive cell division that occurs in the gonads (ovaries and testes), produces gametes in which the number of chromosomes is reduced by **half**. Gametes contain single set of 23 chromosomes, are haploid (n) cells. Fertilization restores the dioloid number of chromosomes. Occurs in two successive stages: 1. **Meiosis I** 2. **Meiosis II** ## Footnote Cell Division
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What is **Meiosis I** in reproductive cell division? ## Footnote Cell Division
Begins when chromosomal replication complete. Consists of 4 phases: 1. **Prophase I** 2. **Metaphase I** 3. **Anaphase I** 4. **Telophase I** ## Footnote Cell Division
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What is **Prophase I** of **Meiosis I** in reproductive cell division? ## Footnote Cell Division
* Extended phase, chromosomes shorten and thicken, nuclear envelope and nucleoli disappear, mitotic spindle forms. * Two sister chromatids of each pair of homologous chromosomes pair off (synapsis). * Resulting 4 chromatids form structure called a tetrad. * Parts of chromatids of 2 homologous chromosomes may be exhanged with one another. * Exchange between parts of nonsister chromatids is crossing over, which resulting cells are genetically unlike eachother and from starting cell. ## Footnote Cell Division
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What is **genetic recombination** in **Meiosis**? ## Footnote Cell Division
* Results from crossing-over (exchange between parts of nonsister chromatids). * Formation of new combinations of genes-and accounts for part of genetic variation among humans and other organisms that form gametes via meiosis. ## Footnote Cell Division
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What is **Metaphase I** of **Meiosis I** in reproductive cell division? ## Footnote Cell Division
Tetrads formed by homologous pairs of chromosomes line up along metaphase plate of the cell, with homologous chromosomes side by side. ## Footnote Cell Division
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What is **Anaphase I** of **Meiosis I** in reproductive cell division? ## Footnote Cell Division
* Members of each homologous pair of chromosomes separate, pulled to opposite poles of cell by microtubules attached to centromeres. * Paired chromatids, held by centromere, remain together. ## Footnote Cell Division
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What is **Telophase I** of **Meiosis I** in reproductive cell division? ## Footnote Cell Division
Each cell has one of the replicated chromosomes from each homologoous pair of chromosomes. ## Footnote Cell Division
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What is **Meiosis II** in reproductive cell division? ## Footnote Cell Division
Is the second stage of meiosis and consists of 4 phases: 1. Prophase II 2. Metaphase II 3. Anaphase II 4. Telophase II Phases similar to those that occur during mitosis; centromeres split, and sister chromatids separate and move toward opposite poles of cell. ## Footnote Cell Division
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How does **anaphase I of meiosis** differ from **anaphase of mitosis**? ## Footnote Cell Division
During anaphase I of meiosis, the paired chromatids are held together by a centromere and do not separate. During anaphase of mitosis, the paired chromatids separate and the centromeres split. ## Footnote Cell Division
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How does **crossing-over** affect the genetic content of the haploid gametes? ## Footnote Cell Division
The result of crossing-over is that four haploid gametes are genetically unlike each other and genetically unlike the starting cell that produced them. ## Footnote Cell Division
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When does **cytokinesis** begin? ## Footnote Cell Division
Cytokinesis usually begins in late anaphase. ## Footnote Cell Division
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During which phase of the cell cycle does **DNA replication** occur? ## Footnote Cell Division
DNA replicates during the S phase of interphase of the cell cycle. ## Footnote Cell Division
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Why must **DNA replication** occur before cytokinesis in somatic cell division? ## Footnote Cell Division
DNA replication must occur before cytokinesis so that each of the new cells will have a complete genome. ## Footnote Cell Division
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What is a **haploid** cell? ## Footnote Cell Division
A single set of 23 chromosomes. ## Footnote Cell Division
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In what unit are the size of cells measured? ## Footnote Cellular Diversity
Measured in units called micrometers. One micrometer is equal to 1 one-millionth of a meter. ## Footnote Cellular Diversity
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What are the different shapes of cells? ## Footnote Cellular Diversity
1. Round 2. Flat 3. Oval 4. Cube-shaped 5. Column-shaped 6. Elongated 7. Star-shaped 8. Cylindrical 9. Disc-shaped ## Footnote Cellular Diversity
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How does **diffusion distance** effect the diffusion rate? ## Footnote Transport across the Plasma Membrane
* The greater the distance over which diffusion must occur, the longer it takes. * Diffusion across a plasma membrane takes fraction of a second because membrane is thin. ## Footnote Transport across the Plasma Membrane