Chapter 7 Flashcards

(33 cards)

1
Q

What is the function of carbohydrates?

A

Needed for energy, protein modification, DNA/RNA, structure, cell-cell communication, etc.
High structural diversity

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2
Q

Describe the structure of carbohydrates

A

Built from monosaccharides containing three to nine carbons
Variation in size
Variation in stereochemistry
Can be linked together in linear or branched structures

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3
Q

What are monosaccharides?

A

Aldehydes or ketones that have two or more hydroxyl groups
Smallest are dihydroxyacetone and glyceraldehyde
Both are 3 carbon chains (trioses)

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4
Q

describe enantiomers

A

stereoisomers that are non-superimposable mirror images

In sugars that contain many chiral centers, only the one that is most distant from the carbonyl carbon is designated as D or L

D and L isomers of a sugar are enantiomers

Most hexoses in living organisms are D stereoisomers

Some simple sugars occur in the L-form, such as L-arabinose

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5
Q

describe epimers

A

Monosaccharides with same number of carbons that differ in configuration at only one carbon are epimers:
D-glucose and D-mannose are epimeric at C-2

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6
Q

describe anomers

A

same number of carbons, ring configuration, different only at C1 carbon (a and b forms)

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7
Q

Why do pentoses and hexoses cyclize?

A

Pentoses and hexoses tend to be cyclic rather than linear

Rings are energetically more stable

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8
Q

How are hemiacetals ad hemiketals formed?

A

Aldehyde and ketone carbons are electrophilic
Alcohol oxygen atom is a nucleophilic
When aldehydes are attacked by alcohols, hemiacetals form
When ketones are attacked by alcohols, hemiketals form

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9
Q

How are acetals and ketals formed?

A

hemiacetal and heiketals react with an HO-R

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10
Q

what is a pyranose ring

A

Pyranoses are six membered rings
Aldoses with six carbons tend to form pyranose rings
Oxygen is one atom in ring

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11
Q

what is a furanose ring

A

Furanose are five membered rings
Ketoses with six carbons can form either furanose or pyranose
Oxygen is one atom in ring

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12
Q

How does glucose form glucopyranose?

A
  • C-1 aldehyde of open-chain glucose reacts with C-5 hydroxyl
  • C-1 carbon is now another asymmetric center in ring
  • Can have a configuration or b configuration, determined by whether C-1 hydroxyl group is on same side or opposite side of ring from the C-6 group
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13
Q

Describe the hayworth projection of glucopyranose

A

Ring structure is shown
C’s not indicated
Heavy line indicates projection toward you
Alpha form drawn with –OH below the ring, beta with –OH above the ring

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14
Q

What are the sugars of nucleic acids?

A
  • they are furanoses
  • 5 carbon chains can also cyclize to form furanose rings
  • ribose has 3 OH groups attached to the carbons of the ring while deoxyribose has 2
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15
Q

What kind of configuration do 6 membered rings have?

A
  • Six membered rings have “chair” and “boat configurations
  • Chair has axial and equatorial groups
  • Axial means parallel to the axis, equatorial is perpendicular to the axis
  • The chair conformation is favored over the boat (which is less stable)
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16
Q

What kind of configuration do 5 membered rings have?

A
  • Tend to have four carbons in plane, one “puckered”
  • Envelope form
  • Named by which carbon is out of plane
  • if the carbon is puckered up it is endo if it is puckered down it is exo
17
Q

What are O and N glycosidic linkages?

A
  • Modification can happen through reaction with amines and alcohols
  • Bond formed between carbon atom of sugar and oxygen (alcohol) or nitrogen (amine) atom
  • Once modified, no longer easily converted to open-chain form
18
Q

Reducing vs non-reducing sugars

A
  • If unmodified, can interconvert with open-chain form that has free aldehyde or ketone
  • Free aldehyde and ketone can react with oxidizing agents and other molecules (aldehyde/ketone becomes oxidized)
  • If aldehyde/ketone is free to act as a reducing agent, we call this a “reducing sugar
19
Q

How do the test strips work that test for glucose in the urine?

A
  • Free glucose can easily bind to many compounds
  • Diabetes causes high blood glucose
  • Test strip contains glucose oxidase and a dye that reacts with H2O2
  • glucose gets oxidized by glucose oxidase and O2 gets reduced to H2O2
  • Readout is optical and correlates with concentration of blood glucose
20
Q

describe the glycosidic bond

A
  • Two sugar molecules can be joined via a glycosidic bond between an anomeric carbon and a hydroxyl carbon
  • The glycosidic bond (an acetal) between monomers is less reactive than the hemiacetal at the second monomer
  • The disaccharide formed upon condensation of two glucose molecules via 1  4 bond is called maltose
  • The free anomeric carbon of the hemiacetal categorizes this sugar as a “reducing sugar.”
21
Q

Describe non reducing disaccharides

A
  • Two sugar molecules can be also joined via a glycosidic bond between two anomeric carbons
  • no hemiacetals
  • There are no reducing ends, this is a nonreducing disaccharide
22
Q

What are common disaccharides and what are the enzymes that break them down into monosaccharides?

A
  • Sucrose, lactose and maltose are most common
  • Sucrose broken down by sucrase into glucose plus fructose
  • Lactose is sugar found in milk. Broken down by lactase (people) or b-galactosidase (bacteria)
  • Maltose made by hydrolysis of starch. Broken down to monosaccharides of glucose by maltase
23
Q

describe glycogen

A
  • Glycogen is a branched homopolysaccharide of glucose
  • Glucose monomers form (alpha 1 to 4) linked chains
  • Branch-points with (alpha 1 to 6) linkers every 8-12 residues
  • Molecular weight reaches several millions
  • Functions as the main storage polysaccharide in animals
24
Q

Describe starch

A

-Starch is a mixture of two homopolysaccharides of glucose
-Amylose is unbranched polymer of (alpha 1 to 4) linked residues
-Amylopectin is branched like glycogen but the branch-points with
(alpha 1 to 6) linkers occur every 24-30 residues
-Molecular weight of amylopectin is up to 200 million
-Starch is the main storage homopolysaccharide in plants

25
How is glycogen broken down?
- Glycogen and starch often form granules in cells - Granules contain enzymes that synthesize and degrade these polymers - Glycogen and amylopectin have one reducing end but many non-reducing ends - Enzymatic processing occurs simultaneously in many non-reducing ends
26
Describe cellulose (glycosidic bonds, H-bonding, function)
- Cellulose is an unbranched homopolysaccharide of glucose - Glucose monomers form (beta 1 to 4) linked chains - Hydrogen bonds form between adjacent monomers - Additional H-bonds between chains - Structure is now tough and water-insoluble - Most abundant polysaccharide in nature - Cotton is nearly pure fibrous cellulose
27
Describe cellulose metabolism
- The fibrous structure, and water-insolubility makes cellulose a difficult substrate to act on - Fungi, bacteria, and protozoa secrete cellulase, which allows them to use wood as source of glucose - Most animals cannot use cellulose as a fuel source because they lack the enzyme to hydrolyze (beta 1 to 4) linkages
28
Describe the properties of chitin
- Chitin is a linear homopolysaccharide of N-acetylglucosamine - N-acetylglucosamine monomers form (beta 1 to 4) linked chains - Forms extended fibers that are similar to those of cellulose - Hard, insoluble, cannot be digested by vertebrates - Structure is now tough but flexible, and water-insoluble - Found in cell walls in mushrooms, and in exoskeletons of insects, spiders, crabs, and other arthropods
29
What are Glycosaminoglycans?
- are heteropolysaccharides of the extracellular matrix - Linear polymers of repeating disaccharide units - Negatively charged - Extended hydrated molecule: Minimizes charge repulsion - different disaccharides contribute to connective tissues, lubrication of joints, tensile strength of cartilage, tendons, ligaments, walls of aorta, pliability of skin, blood vessles, and heart valves, cornea, bone, hair, nails, claws etc
30
What are proteoglycans?
- Sulfated glycoseaminoglycans attached to a large rod-shaped protein in cell membrane - Usually found on the cell surface - Syndecans: protein has a single transmembrane domain - Glypicans: protein is anchored to a lipid membrane - Interact with a variety of receptors from neighboring cells and regulate processes such as cell growth
31
Describe Proteoglycan Aggregates
- Hyaluronan and aggrecan form huge (Mr > 2•108) non-covalent aggregates - Hold lots of water (1000 X its weight); provides lubrication - Very low friction material - Covers joint surfaces: articular cartilage - Reduced friction - Load balancing
32
Describe glycoproteins
- A protein with small oligosaccharides attached - Usually found on the outer face of the plasma membrane - Found in golgi, lysosomes - Carbohydrate attached via its anomeric carbon - Rich in information, are recognized by lectins
33
Describe glycolipds
- A lipid with covalently bound oligosaccharide - Parts of plant and animal cell membranes - In gram-negative bacteria, lipopolysaccharides cover the peptidoglycan layer