Chapter 7: Methods of Studying the Brain's Structures and Functions Flashcards

1
Q

Functional Near-Infrared Spectroscopy (fNIRS)

A

noninvasive technique that gathers light transmitted through cortical tissue to image oxygen consumption, form of optical tomography

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2
Q

Neuropsychology

A

study of relationships between brain function and behavior, especially in humans

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3
Q

Behavioral Neuroscience

A

study of the biological bases or behavior in humans and other animals

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4
Q

Stereotaxic Apparatus

A

surgical instrument that permits a researcher or neurosurgeon to target a specific part of the brain

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5
Q

Compensation

A

following brain damage, the neuroplastic ability to modify behavior from that used prior to damage

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6
Q

Deep Brain Stimulation (DBS)

A

neurosurgery in which electrodes implanted in the brain stimulate a targeted area with a low-voltage electrical current to produce or facilitate behavior

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7
Q

Transcranial Magnetic Stimulation (TMS)

A

procedure in which a magnetic coil is placed over the skull to stimulate the underlying brain, used either to induce behavior or to disrupt ongoing behavior

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8
Q

Synthetic Biology

A

design and construction of biological devices, systems, and machines found in nature

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9
Q

Chemogenetics

A

transgenic technique that combines genetic and synthetic drugs to activate targeted cells in living tissue

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10
Q

Place Cells

A

hippocampal neurons maximally responsive to specific locations in the world

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11
Q

Electrocorticography (ECoG)

A

graded potentials recorded with electrodes placed directly on the surface of the brain

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12
Q

Alpha Rhythm

A

large, extremely regular brain waves with a frequency ranging from 7 to 11 Hz, found in most people when they are relaxed with eyes closed

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13
Q

Event-Related Potential (ERP)

A

complex electroencephalographic waveform related in time to a specific sensory event

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14
Q

Magnetoencephalogram (MEG)

A

magnetic potentials recorded from detectors placed outside the skull

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15
Q

Computed Tomography (CT)

A

x-ray technique that produces a static three-dimensional images (called a CT scan) of the brain in cross section

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16
Q

Magnetic Resonance Imaging (MRI)

A

technique that produces a static three-dimensional brain image by passing a strong magnetic field through the brain, followed by a radio wave, then measuring a radio-frequency signal emitted from hydrogen atoms

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17
Q

Diffusion Tensor Imaging (DTI)

A

magnetic resonance imaging method that can image fiber pathways in the brain by detecting the directional movements of water molecules

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18
Q

Magnetic Resonance Spectroscopy (MRS)

A

magnetic resonance imaging method that uses the hydrogen protein signal to determine the concentration of brain metabolites, used to identify changes in specific markers of neuronal function, which is promising for accurate diagnosis of traumatic brain injuries

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19
Q

How do we study the brain’s structure and functions?

A

measuring and manipulating brain and behavior

measuring the brain’s electrical activity

anatomical imaging techniques: CT and MRI

functional brain imaging

chemical and genetic measures of brain and behavior

comparing neuroscience research methods

using animals in brain-behavior research

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20
Q

What is functional near-infrared spectroscopy (fNIRS)

A

non-invasive technique that gathers light transmitted through cortical tissue to image oxygen consumption

form of optical tomography

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21
Q

What is shown in the fNIRS of babies exposed to language?

A

when babies were exposed to words of their parent’s language a specific pattern of activation emerges

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22
Q

What processes were involved in twentieth century neuroscience?

A

lesions and localization of function: observing how people or animals with head injuries act

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23
Q

What is neuropsychology?

A

study of the relationships between brain function and behavior

emphasis on humans

measuring brain and behavior includes noninvasive imaging, complex neuroanatomical measurement, and sophisticated behavioral analyses

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24
Q

What are the origins of neuropsychology?

A

Paul Broca discovered the link between specific damage located in the left frontal lobe region and language difficulties (1863)

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25
What are the early origins of behavioral neuroscience?
techniques for neuroanatomy histological: brains sectioned postmortem and tissue stained with different dyes (early 20th century)
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What do contemporary techniques in behavioral neuroscience involve?
contemporary techniques identify molecular, neurochemical, and morphological differences among neuronal types how these differences contribute to behavior
27
What were brain imaging techniques in the early 20th century?
light microscopic techniques allowed researchers to divide the cerebral cortex into many distinct zones based on the characteristics of neurons in those zones researchers presumed cortical zones had specific functions
28
What were brain imaging techniques in the early 21st century?
researchers learned to label neurons and their connections + glial cells Brainbow: dye specific glial cells based on different chemicals
29
What are the characteristics of modern day methods of brain imaging?
prioritize greater resolution and specificity visualize living tissue instead of dead tissue can visualize neuron's structures visualize synapses in 3D detail can mount a telescope on the head of a mouse
30
How do modern techniques allow for the study of anatomy and behavior?
learning example learning is correlated with neuroanatomical changes (modification of synaptic organization of specific neurons, where and how new synaptic connections were made) modern techniques allow researchers to track these specific anatomical changes
31
What is ethology?
the objective study of animal behavior, especially under natural conditions animal learning and ethology provide the basis for modern behavioral neuroscience
32
What is the neuropsychological testing of humans?
the brain can control a wide range of functions (movement, perception, emotion) any analysis of behavior must be tailored to the particular functions under investigation
33
How are memory disturbances measured?
memory is not a single function (memory for events, colors, names, places, and motor skills) it is rare for someone to be impaired in all forms of memory, so each must be measured separately
34
Why are rats used in the study of behavioral neuroscience?
rats have very large behavioral repertoires can be independently examined can study the neural bases on sensation, cognition, memory, movement, etc. using mazes and other tests
35
What was the swimming pool tasks experiments on rats?
Richard and Morris (1981), navigation task place learning: rat must find platform using external cues matching-to-place learning: platform is in a different location each day landmark version: platform is identified by a cue on the pool walls
36
What was the skill reaching task involving rats?
rats were trained to reach through a slot to obtain food movements can be broken down into segments, which are differently affected by different types of neurological perturbation can be used to learn about deficits in fine movement induced by strokes
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How are automated touchscreen platforms used to study rats?
automated touchscreen tools cognitive and motivational testing programmed to deliver tests less stressful to the rat
38
How is manipulation of brain-behavior interactions used to study the brain?
we can manipulate some aspect of brain function and see how behavior changes manipulation helps in developing hypotheses about how the brain affects behavior and then test the hypotheses manipulation helps in developing animal models of neurological and psychiatric disorders using techniques such as drugs and electrical stimulation to activate the brain and lesions to inactivate them animals can be manipulated using diets, social interaction, exercise, sensory stimulation, etc
39
What are brain lesions?
the first (and simplest) technique used for brain manipulation is to ablate (remove or destroy) tissue used by Karl Lashley (1920s) to fins location of memory in the brain Scoville removed the hippocampus from H.M. to treat epilepsy, but produced amnesia instead
40
What is a stereotaxic apparatus?
surgical instrument used to target a specific part of the brain allows the precise positioning of all brain regions relative to each other and to landmarks on the skull used to destroy specific brain regions or to locate areas to inject drugs, etc.
41
What is compensation?
the neuroplastic ability to modify behavior from that used prior to the damage to avoid compensation following permanent lesions, temporary and reversible lesion techniques are used regional cooling prevents synaptic transmission: hollow metal coiled placed next to brain structure, chilled fluid cools brain region to prevent synaptic transmission local administration of a GABA agonist increases local inhibition
42
How is brain stimulation used to study brain function?
the brain operates on both electrical and chemical energy it is possible to selectively turn brain regions on or off by using electrical or chemical stimulation now we can use stereotaxic instruments to place electrode or cannula in specific brain regions goal: enhancing or blocking neuronal activity and observing behavioral effects
43
How is brain stimulation used on rats?
rats with electrodes in the lateral hypothalamus eat whenever the stimulation is turned on self-stimulation: given the opportunity, rats will press a lever to obtain the current the stimulation affects a neural circuit involving both eating and pleasure
44
How does brain stimulation improve movement?
electrically stimulating the intact cortex adjacent to cortex injured by stroke leads to improvement in motor behaviors Terskey and colleagues restored motor deficits in a rat model of Parkinson disease by electrically stimulating a specific brain nucleus
45
What is deep-brain stimulation?
electrodes implanted in the brain stimulate a targeted area with a low-voltage electrical current to facilitate behavior used for Parkinson disease, depression, OCD DBS to the Globus pallidus in the basal ganglia of Parkinson patients makes movements smoother invasive: holes must be drilled in the skull to attach the electrode in the brain
46
What is transcranial magnetic stimulation (TMS)?
procedure in which magnetic coil is placed over the skull to stimulate the underlying brain a high-voltage current pulsed through the coil produces a rapid increase and subsequent decrease in the magnetic field around the coil the magnetic field easily passes through the skull and causes a population of neurons in the cerebral cortex to depolarize and fire used either to induce behavior or to disrupt ongoing behavior non-invasive motor cortex stimulation: induces body movements visual cortex stimulation: participant sees phosphenes
47
How are drug manipulations used to study brain function?
drugs can pass into the bloodstream and enter the brain through an indwelling cannula that allows direct application of drugs to specific brain structures drugs can influence the activity of specific neurons in specific brain regions because drug effects wear off over time, it is possible to study drug effects on learned behaviors, such as skilled reaching
48
What is synthetic biology?
the design and construction of biological devices, systems, and machines not found in nature techniques include inserting or deleting a genetic sequence into the genome of a living organism
49
What is the CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) method?
cuts DNA in any cell used to silence genes by cutting out those regions in the DNA DNA repair can be tailored to insert a new sequence to replace previous one
50
What is optogenetic?
transgenic technique that combines genetics and light to control targeted cells in living tissue based discovery that light can activate proteins proteins that occur naturally can be inserted into cells fiber-optic light can be delivered to selected brain regions such that all neurons exposed to the light respond immediately great potential for research high spatial and temporal resolution ion channels can be placed into specific cell lines and turned on and off on millisecond time scales
51
What are opsins?
proteins derived from microorganisms combine a light-sensitive domain with an ion channel channelrhodopsin-2 (ChR2): when expressed in neuron and exposed to blue light, ion channels open and depolarizes neuron = excitation halorhodopsin (NpHR): a green-yellow light activates a chloride pump, hyperpolarizing the neuron = inhibition
52
What are the four major techniques for measuring the brain's electrical activity?
single-cell recording electroencephalography (EEG) event-related potentials (ERP) magnetoencephalography (MEG)
53
What is the process of recording action potentials from single cells?
measuring single-neuron action potentials with fine electrodes electrodes placed next to cells (extracellular recording) or inside them (intracellular recording) extracellular recording techniques make it possible to distinguish the activity of as many as 40 neurons at once intracellular recording allows study and recording of a single neuron's electrical activity
54
What is single cell recording?
O'Keefe & Dostrovsky (1971) showed that neurons in the rat and mouse hippocampus vigorously fire when an animal is in a specific place in the environment these place cells code the spatial location of the animal and contribute to a spatial map of the world in the brain won a Nobel prize in 2014 for their discoveries of cells that constitute a positioning system in the brain
55
What are EEGs?
EEG measures the summed graded potentials from many thousands of neurons reveals features of the brain's electrical activity the EEG changes as behavior changes an EEG recorded from the cortex displays an array of patterns, some of which are rhythmical the living brain's electrical activity is never silent, even when the person is asleep or comatose
56
What are ERPs?
largely the graded potentials on dendrites that a sensory stimulus triggers complex EEG waveforms are related in time to a specific sensory event to counter noise effects, the stimulus is presented repeatedly, and the recorded responses are averaged
57
How are ERPs detected?
in the averaging process for an auditory ERP, a tone is presented at time 0, and EEG activity in response is recorded after many successive presentations of the tone, the EEG wave sequence develops a distinctive shape that becomes extremely clear after 100 responses are averaged positive and negative waves that appear at different times after the stimulus presentation are used for analyses
58
What are the advantages and disadvantages of using EEG and ERP?
non-invasive cost can record from hundreds of sites high temporal resolution poor spatial resolution can't record deep brain regions
59
What is magnetoencephalography?
neural activity, by generating an electrical field, also produces a magnetic field magnetic potentials are recorded from detectors placed outside the skull permit a three-dimensional localization of the cell groups generating the measured field higher resolution than ERP disadvantage: high cost
60
What is computed tomography (CT scan)?
X-ray beams are passed through the brain at many different angles, creating many different images images are combined with the use of computing and mathematical techniques to create a three-dimensional image of the brain
61
How are brain structures observed through a CT scan?
dense skull forms white border gray matter density does not differ from white matter density enough for a CT scan to distinguish between the two cortex and its underlying white matter show up as homogeneous gray ventricles can be visualized because the fluid in them is far less dense some major fissures in the cortex are rendered darker
62
What is magnetic resonance imaging (MRI)?
produces a static, three dimensional brain image by passing a strong magnetic field through the brain, followed by a radio wave, then measuring the radiation emitted from hydrogen atoms
63
What is diffusion tensor imaging (DTI)?
detects the directional movements of water molecules to image nerve giber pathways in the brain used to delineate abnormalities in neural pathways
64
What is magnetic resonance spectroscopy (MRS)?
MRI method that uses the hydrogen proton signal to determine the concentration of brain metabolites useful in detecting persisting abnormalities in brain metabolism in disorders such as concussion
65
What is functional brain imaging?
when a brain region is active, the amount of blood, oxygen, and glucose flowing to the region increases possible to infer changes in brain activity by measuring either blood flow or levels of the blood's constituents, such as oxygen, glucose, and iron
66
What is functional magnetic resonance imaging (fMRI)?
when neurons become active they use more oxygen active neurons increase blood carbon dioxide levels, which signal blood vessels to dilate, increasing blood flow and bringing more oxygen to the area the amount of oxygen in an activated brain area increases changes in the oxygen content of the blood alter the magnetic properties of the water in the blood oxygen-rich hemoglobin is less magnetic than oxygen-poor hemoglobin MRI could accurately match these changes in magnetic properties to specific brain locations fMRI allows for good spatial resolution of the brain activity's source
67
What are the advantages and disadvantages of fMRI?
the dense blood vessel supply to the cerebral cortex allows for a spatial resolution of fMRI on the order of 1 millimeter (very high spatial resolution) changes in blood flow take 1/3 second, poorer temporal resolution relative to EEG extremely restrictive to subject must stay motionless
68
What is functional near-infrared spectroscopy (fNIRS)?
form of optical tomography technique that operates on the principle that an object can be reconstructed by gathering light transmitted through it optical tomography can image soft body tissue, such as the brain
69
What is optical tomography?
reflected infrared light is used to determine blood flow because oxygen-rich hemoglobin and oxygen-poor hemoglobin differ in their absorption spectra by measuring the blood's light absorption, it is possible to measure the brain's average oxygen consumption (just like fMRI) in fNIRS, an array of optical transmitter and receiver pairs are fitted across the scalp
70
What are the advantages of optical tomography?
relatively easy to hook up can record short periods of activation
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What are the disadvantages of optical tomography?
light doesn't penetrate deeper brain tissue, restricted to cortex spatial resolution poorer than fMRI
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What is positron emission tomography (PET)?
imaging technique that detects changes in blood flow by measuring changes in the uptake of compounds such as oxygen or glucose used to analyze the metabolic activity of neurons radioactive molecules are injected into the bloodstream (radioactive isotope oxygen-15 are very unstable, break down in just a few minutes, relatively safe) radioactive oxygen-15 molecules release tiny positively charged subatomic particles known as positrons positrons are attracted to negatively charged electrons in the brain (collision of the two particles leads to a release of energy) this energy leaves the head at the speed of light (detected by the PET camera, can target source of energy release)
73
What are the advantages of positron emission tomography?
can detect the decay of hundreds of radiochemicals and allows the mapping of a wide range of brain changes and conditions can detect relative amounts of a given neurotransmitter, the density of receptors, and metabolic activities associated with learning, brain poisoning, and degenerative processes widely used to study cognitive function
74
What are chemical and genetic measures of brain and behavior?
neurons are regulated by genes that encode the synthesis of particular proteins within cells genes control the cell's production of chemicals so it is possible to relate behavior to genes and to chemicals inside and outside the cell the brain contains a wide mixture of chemicals, abnormalities in these chemicals leads to disruptions in behavior, low serotonin production correlated with depression
75
What is microdialysis?
technique used to determine the chemical constituents of extracellular fluid catheter with semipermeable membrane is placed in the brain fluid flows in, where it passes along the membrane diffusion drives the passage of extracellular molecules across the membrane fluid containing the molecules from the brain exits through tubing and is collected for analysis
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How does measuring genes contribute to studies of brain and behavior?
variations in gene sequences contribute to brain organization studying twins and adopted children allows us to tease apart environmental and genetic contributions to behavior we can also relate the alleles of specific genes to behaviors
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What does the Bueller (2006) study tell us about genes affect on brain and behavior?
the Met allele is associated with an 11% reduction in hippocampal volume and poorer memory for specific events Val allele carriers have better episodic memory but higher incidence of anxiety disorders two alleles produce different phenotypes, they influence brain structure differently
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What is epigenetics?
genes that are expressed can change dramatically in response to environment and experience epigenetic changes can persist throughout a lifetime and even across multiple generations wide range of experiential factors: chronic stress, traumatic events, drugs, culture, and disease are factors, cumulative experiences affect how genes work epigenetic changes may be related to better stroke recovery
79
How are neuroscience research methods compared?
some researchers focus on morphology (structure) in postmortem tissue other investigators focus more on the ways neurons generate electrical activity in relationship to behavior or on functional changes in brain activity during specific types of cognitive processing considerations: temporal resolution (how quickly the measurement or image is obtained), spatial resolution (how accurate localization is in the brain), degree of invasiveness studying brain and behavior linkages by perturbing the brain is generally less costly then some imaging methods, many of which require expensive machinery
80
What are two important issue in using animals in brain-behavior research?
do animals actually contract the same neurological diseases as humans? how ethical is it to use animals in research?
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What are the benefits of animal models of disease?
some disorders are easy to model (eg stroke) behavioral disorders are more difficult
82
What is the Kyoto SHR rat?
proposed as a good model for ADHD known abnormalities in prefrontal dopaminergic supply that correlate with behavioral abnormalities such as hyperactivity dopamine agonists as as methylphenidate (Ritalin) can reverse behavioral abnormalities, both in children with ADHD and in SHR rats
83
What is the relationship between animal welfare and scientific experimentation?
most governments regulate the use of animals in research universities and other research organizations have additional rules governing animal use legislation concerning the care and use of laboratory animals in the United States is set forth in the Animal Welfare Act all accredited North American universities that receive government grant support are required to provide adequate treatment for all vertebrate animals
84
What are the guidelines of the Canadian Council on Animal Care?
1. research needs to contribute and benefit animals and humans 2. treat the animals well so the results aren't skewed 3. public confidence is needed to ensure justified animal use 4. animals are used only if the researcher's best efforts to find an alternative have failed