Clinical Cancer Genetics Flashcards

(44 cards)

1
Q

What is the inheritance pattern of the majority of high risk cancer predisposition genes?

A

Autosomal dominant

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2
Q

Is hereditary cancer more common or rarer than sporadic?

A

RARER - vast majority do not have an inherited cancer

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3
Q

Describe the difference of a constitutional (germline) mutation vs somatic

A
  • Germline mutations are mutations that the person is born with due to a mutation being present in the gamete of a parent
  • Somatic mutations are acquired and can not be given to children - can be thought of as ‘tumour only’ and they make up the vast majority of cancers
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4
Q

What is the difference between a hereditary and acquired mutation?

A
Hereditary = germline
Acquired = any other time
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5
Q

What are the two different types of genetic susceptibility?

A
  • High risk cancer genes
  • Familial cancer
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6
Q

What are high risk cancer genes?

A

A single genetic change (mutation) in a high risk cancer gene and this increases their risk of cancer significantly

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7
Q

What are familial cancers?

A

Due to multiple lower risk genetic factors (so is multifactorial) to increase cancer risk - is much more common

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8
Q

Describe the frequency in the population of mutations causing a high risk of cancer in inherited disease

A

This is very low, most are low risk or intermediate risk (2-4 x chance) but few are high risk variants such as macular degeneration

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9
Q

What is an example of a high effect common variant influencing common disease?

A

Macular degeneration

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10
Q

What do the most common high risk cancer predisposition genes code for?

A
  • Retinoblastoma
  • Medullary thyroid
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11
Q

What can you use to identify genetically predisposed cancers?

A

Family history
Syndromic features
Tumour testing
Pathology of cancer

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12
Q

Describe the BRCA1 and BRCA2 genes in cancer risk

A

These are high risk breast cancer genes

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13
Q

What does a family history assessment show?

A
  • Age of onset
  • Type of cancer
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14
Q

How do you get a polygenic risk score?

A

GWAS for cancer associated SNPs

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15
Q

How can we sometimes use syndromic features to identify a patient that has a high risk cancer gene - name some

A

Some rare high risk cancer gene mutations show (mostly dermatological) syndromic features such as:

  • trichilemmoma (PTEN gene mutation)
  • mucocutaneous pigmentation (STK11 gene mutation)
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16
Q

How can you check if a mutation is germline?

A

blood test

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17
Q

What is stratified prevention?

A

Categorisation of the population into risk groups, each of which would be offered a different intervention

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18
Q

Explain what category B1 and B2 surveillance is

A

Guidelines for breast cancer, we take family history and look at family history and other things and use an algorithm to add up the risk

19
Q

How often are all women screened for breast cancer?

A

3 yearly from 47-70

20
Q

How big of a risk is B1 surveillance?

21
Q

How big of a risk is B2 surveillance

22
Q

If you are on B1 surveillance how often do you get invited for breast cancer screening?

A
  • Anually 40-50
  • 3 yearly 50-70
23
Q

How often do you get invited for breast cancer screening if you’re on B2 surveillance?

A
  • Annual 40-60
  • 3 yearly 60-70
24
Q

What is tamoxifen?

A

Anti-oestrogen drug, shown to decrease risk of developing cancer if they come from a family with increased susceptibility of cancer

25
What is chemo prevention?
Use of drugs to preemptively minimise cancer risk (B2)
26
Describe when we test for high risk cancer causing genes - what is the condition that needs to be met before we test?
When the likelihood of finding a pathogenic variant is greater than 10%
27
Why is there a large range in the % of people that develop cancer when they have a high risk cancer predisposition gene?
Due to the potential involvement of environmental factors
28
What is the pattern of inheritance for the large majority of cancer predisposition genes?
Autosomal dominant
29
Name a recessive predisposition gene
MUTYH (predisposition to cancer and colon polyps)
30
Describe the different types of genetic testing that we might do in the NHS
* single gene * NGS panel (looking at multiple genes) - is more common * WES * WGS - in the future we will do WGS for both the tumour and the germline for all cancer patients!
31
If we identify pathogenic variant, what actions can we do?
* non-invasive imaging being more frequent and at a younger age * invasive imaging * chemoprevention * risk-reducing surgeries
32
Why has there been a move to WGS for genetic cancer testing?
* Increased mutation detection * Increased understanding of mutagenesis * Greater understanding of phenotypic spectrum/cancer risk
33
What are the possible outcomes of diagnostic genetic testing?
* No disease causing variant * Variant of uncertain sigificance identified * Disease causing variant identified
34
What are the only 2 genes that significantly increase the risk of both breast cancer and ovarian cancer?
BRCA1 and BRCA2
35
What is predictive testing?
A test in a well person to predict future risk
36
What are the BRCA1 and BRCA2 genes involved in?
DNA repair and regulation of transcription
37
Describe the management of people with BRCA1 or 2 but who do not have cancer yet
* screening (annual MRI and mammography) but not ovarian screening or for other cancers * discussion of bilateral risk-reducing mastectomy * offer risk-reducing salpingo-oophorectomy once childbearing is complete this is the removal of fallopian tubes and then uterus * do not discuss chemoprevention with BRCA1 but do with BRCA2
38
What is Lynch syndrome?
Familial colorectal cancer, womb and ovarian cancer * mutation in one of 4 genes * due to mismatch repair
39
What is the prevelance of lynch syndrome?
1 in 440
40
What genes are involved in lynch syndrome?
MLH1, MSH2, MSH6 and PMS2
41
What types of cancer is lynch syndrome most associated with?
Colorectal, endometrial and ovarian
42
Describe the testing and screening in Lynch syndrome
* We test the tumour for one of the 4 mutations with immunohistochemistry (stain to check for missing proteins) * screen for colorectal and gastric
43
What risk reducing surgery is done in lynch syndrome?
Hysterectomy
44
What chemoprevention is done in lynch syndrome?
Low dose aspirin