DNA Flashcards

(31 cards)

1
Q

how did we figure out it was DNA and not protein as the genetical material

A

studying radioactive virus DNA and phages, seeing if radioactive phages came out of the bacteria

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2
Q

what is the stricture of DNA nucleotides

A

a deoxyribose sugar (5 carbon) with a nitrogenous base attached to the 1’ and a phosphate group attached to the 5’

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3
Q

what are purines

A

a type of nitrogenous base that has 2 rings
adenine and guanine

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4
Q

what are pyrimidines

A

a nitrogenous base that has one ring
thymine and cytosine

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5
Q

what type of bond links the DNA nucelotides

A

phosphodiester bond

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6
Q

how do DNA strands form together

A

double helix format
hydrogen bonds linking the bases (C-G with 3 H bonds, A-T with 2)
running in opposite ends of the other
(at top one strand starts as a 5’ and the other a 3’)

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7
Q

what is the conservative model of DNA replication

A

belief that once replicated one has both parental strands and the other has both replicated strands

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8
Q

what is the dispersive model of DNA replciation

A

both strands have interspersed segments of both parental and replicated DNA
(chopped up and spliced together)

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9
Q

what is the semiconservative model of DNA replication

A

each strand has one parental and one replicated strand

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10
Q

which model of DNA replication is true

A

semiconservative model

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11
Q

what was the test to see which model was true

A

soaking DNA in heavy nitrogen and then during replication switching it to a lighter nitrogen and then seeing which replication had what nitrogen

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12
Q

where are parental strands separated

A

at multiple origins of replication

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13
Q

what is a replication bubble

A

bubble that occurs at the origins of replication when they are separated

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14
Q

which direction does replication occur in at the origin of replication

A

both directions, bidirectional

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15
Q

what synthesizes the new DNA strand

A

DNA polymerase

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16
Q

true or false: DNA polymerase can add nucleotides to the 5’ end

A

false, they can only add to the 3’ end

17
Q

what does the sliding clamp do

A

holds the DNA polymerase into the template strand

18
Q

what direction does synthesis occur in on each separate strand

A

from the 5’ to 3’ end for the daughter strand
(starting from the 3’ end on the parental strand)

19
Q

what is the leading strand

A

the strand that synthesizes towards replication fork where synthesis is a continuous strand towards the fork along the leading strand template

20
Q

what is the lagging strand

A

the strand that synthesizes away from the replication fork through discontinuous synthesis fragments

21
Q

what are the fragments of the lagging strand called

A

Okazaki fragments

22
Q

what enzyme unwinds the double helix and how

A

helicase breaks down hydrogen bonds between base pairs

23
Q

what is the job of the topoisomerase

A

stops extra coiling of DNA resulting form the helicase by swiveling and rejoining the DNA strands ahead

24
Q

what keeps the separated DNA strands from reconnecting

A

single stranded binding proteins

25
what does the primase do
places RNA primers and removes the single-stranded binding proteins locally in the process
26
why do we need an RNA primer
to get the new replicated strand started by having an exposed 3'
27
what does the DNA polymerase 3 do
begins making the daughter strand by placing DNA nucleotides
28
true of false: the lagging strand needs multiple RNA primers compared to the leading strand
True, leading strand only needs one as it has a continuous synthesis
29
what does DNA polymerase 1 do
attaches the Okazaki fragments and removes the nucleotides of the RNA primer with DNA nucleotides
30
what does the DNA polymerase leave behind
a nick between the strands it fixes
31
how do we fix a nick in the DNA strand
using the DNA ligase that completes the phosphodiester bond, once done the ligase leaves