EXAM Flashcards

(46 cards)

1
Q

What is Chromatography?

A

A technique used to separate a mixture into its individual components based on differences in their composition (e.g., size, structure). It involves a stationary support and a mobile phase

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2
Q

What is the difference between Planar and Column Chromatography?

A

Planar: Stationary phase (SP) on a flat plate or paper, mobile phase (MP) moves by capillary action or gravity (e.g., TLC, paper chromatography)
Column: SP held in a narrow tube, MP forced through under pressure or by gravity (e.g., GC, LC, IC)

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2
Q

Name the primary separation mechanisms in column chromatography.

A

Mainly adsorption and partition. Others include size exclusion (gel filtration), ion exchange, ion pair, and affinity

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2
Q

What is a Chromatogram?

A

A plot showing the detector response over time. Peak positions can identify components, and peak areas can quantify them

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2
Q

What are common measures of migration/retention in column chromatography?

A

Retention time (tr), Void time (tm or t0), Capacity Factor (k’).

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2
Q

What is Void time (tm or t0)?

A

The time taken for the mobile phase to reach the detector (representing the volume outside the stationary phase pores).

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2
Q

How is Capacity Factor (k’) calculated and what does it indicate?

A

k’ = (tr – tm) / tm. It is a measure of chromatographic retention that corrects for the void time. An optimum range is 1 < k’ < 10

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2
Q

How is Selectivity (α) calculated and what does it indicate?

A

α = k’b / k’a or (tr(b) - tm) / (tr(a) - tm) for two components. It indicates the quality of separation between two components. α > 1 suggests separation, higher α means greater separation.

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2
Q

What is the principle of Adsorption Chromatography?

A

Separation based on the adsorption affinities of sample components for the surface of a solid stationary phase

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2
Q

What is Resolution (Rs)?

A

Rs measures the degree of peak overlap, taking into account peak width. It’s calculated as Rs = 2[tr(b) – tr(a)] / (Wa + Wb)

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2
Q

What Resolution (Rs) value indicates baseline resolution (complete separation)?

A

An Rs value of ≥ 1.5

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2
Q

Differentiate between Normal Phase and Reverse Phase Chromatography.

A

Normal Phase: Uses a polar stationary phase and a relatively non-polar mobile phase.
Reverse Phase: Uses a non-polar stationary phase (e.g., hydrocarbon) and a relatively polar mobile phase (e.g., water, methanol). Reverse phase is the most common type in HPLC

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2
Q

How is the Partition Coefficient (Kav) calculated in Gel Filtration Chromatography?

A

Kav = (Ve - Vo) / Vt
where Ve is elution volume, Vo is void volume, and Vt is total column volume.

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2
Q

What is the principle of Partition Chromatography?

A

Separation based on the equilibration (partitioning) of solutes between a liquid stationary phase (a thin film on a solid support) and a mobile phase

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3
Q

What is Gel Filtration Chromatography (Size Exclusion Chromatography)?

A

A technique that separates molecules based on their size (hydrodynamic radius) as they pass through a porous stationary phase

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3
Q

What is Ion Exchange Chromatography (IEC)?

A

An LC technique that separates molecules based on their charge, using a stationary phase with covalently attached ionic functional groups that reversibly interact with charged solutes

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3
Q

How does size affect elution in Gel Filtration Chromatography?

A

Larger molecules that cannot enter the pores elute first (at the void volume, Vo) [Previous conversation]. Smaller molecules that enter the pores elute later, with elution volume (Ve) increasing as size decreases

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3
Q

What are the two main types of Ion Exchange Chromatography?

A

Cation Exchange: Uses a negatively charged stationary phase and binds positively charged molecules.

Anion Exchange: Uses a positively charged stationary phase and binds negatively charged molecules.

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3
Q

How is a protein’s charge related to its Isoelectric Point (pI) and buffer pH?

A

At pH < pI, the protein has a net positive charge. At pH > pI, it has a net negative charge. At pH = pI, it has a net zero charge.

3
Q

How are molecules typically eluted from an Ion Exchange column?

A

By changing the pH of the mobile phase or by increasing the salt concentration, which competes with the bound molecules for binding sites on the stationary phase.

3
Q

What is Affinity Chromatography?

A

A separation of molecules based on an interaction between the target molecule and a specific ligand immobilised on the stationary phase.

3
Q

How are molecules typically eluted from an HIC column?

A

By decreasing the salt concentration of the mobile phase (high salt promotes binding to the hydrophobic stationary phase, low salt promotes elution)

3
Q

How is Immobilised Metal Affinity Chromatography (IMAC) used?

A

IMAC uses immobilised metal ions (e.g., Ni2+) on the stationary phase to bind proteins that have specific metal-chelating residues, most commonly a poly-Histidine tag (His-tag), for purification

3
Q

What is Hydrophobic Interaction Chromatography (HIC)?

A

A technique that separates molecules based on their surface hydrophobicity, using a stationary phase with hydrophobic ligands.

3
Name some common GC detectors.
Thermal Conductivity (TCD), Flame Ionization (FID), Electron Capture (ECD), Nitrogen Phosphorous (NPD), Mass Spectrometry (MS)
4
What does HPLC stand for?
High Performance Liquid Chromatography
4
What does GC stand for?
Gas Chromatography
4
What does IC stand for
Ion Chromatography
4
What is the most extensively used detector in Ion Chromatography?
The Electrical Conductivity Detector.
4
Which GC detector is universal and non-destructive?
The Thermal Conductivity Detector (TCD)
4
Which GC detector is highly sensitive for compounds containing halogens (Cl, F)?
The Electron Capture Detector (ECD)
4
Name some common HPLC detectors.
Absorbance (UV/Vis), Fluorescence, Mass Spectrometry (MS), Refractive Index.
4
Which HPLC detector is the most widely used?
The UV/Vis Absorbance detector
5
Why is a suppressor often used in Ion Chromatography with conductivity detection?
To reduce the high background conductivity of the mobile phase (electrolyte) and increase detection sensitivity for the analytes
6
What does Mass Spectrometry (MS) measure?
The mass-to-charge ratio (m/z) of ions created from the sample molecules
7
What information can Mass Spectrometry provide?
Molecular weight information and clues about the chemical structure of compounds, and can identify compounds
8
What parameters are used for quantification in chromatography?
Peak height or peak area
9
Why is peak area generally preferred over peak height for quantification?
Peak area is typically less affected by variations in conditions like column temperature, mobile phase flow rate, and sample injection
10
Describe the Internal Standard method for quantification.
An equal amount of standard is added to all standards and the unknown sample. A ratio of the analyte peak area to the internal standard peak area is used for calibration. It corrects for injection volume variations
11
Describe the External Standard method for quantification.
A series of standards of known concentrations are analysed separately to create a calibration curve (peak area vs concentration). The concentration of the unknown sample is determined from its peak area using this curve.
12
When is the Standard Addition method particularly useful?
When the sample contains matrix effects that influence the analytical signal. Known amounts of the analyte standard are added to the unknown sample to compensate for these effects
13
What are the main steps in protein purification?
Extraction (from source), Fractionation, Chromatography (separation), Final Analysis (quantification/activity). Monitoring is important throughout.
14
How are proteins stabilised during purification?
By using appropriate buffers (controlling pH, salt), keeping samples cold for heat-labile proteins, and adding protease inhibitors
15
Name some common methods for concentrating protein solutions.
Salting out (e.g., Ammonium sulfate), Ethanol/Acetone precipitation, Ultrafiltration, Lyophilisation, Dialysis against a water absorbing medium
16
Why is Gel Filtration Chromatography often used as a "polishing step" late in protein purification?
Gel filtration columns typically have limited resolving power (can only resolve a few proteins), making them best suited for the final separation after initial purification steps have reduced the complexity of the mixture
16