Exam 2 Flashcards
(268 cards)
What are the differences between Gram pos and Gram neg bacteria:
- drug penetration of the cell membrane
- distribution of β-lactamases
- peptidoglycan thickness
- number of membranes in the cell wall
- peptidoglycan content
- peptidoglycan bridging
Gram positive -
- drugs can penetrate the outer layers of the cell wall effectively
- β-lactamases are excreted through the cell wall to the external environment (this means G+ needs to produce more β-lactamases compared to G-)
- very thick peptidoglycan
- 1 bacterial membrane (this membrane is the main barrier keeping drugs out of the cell)
- peptidoglycan an L-lysine residue replaces the meso-diaminopimelic acid residue found in G-, meaning an H replaces the COOH of the DAP in G-
- peptidoglycan bridging exists between the L-Lys strand and the terminal D-Ala of the second molecule
Gram negative -
- drugs don’t penetrate much due to the outer membrane
- β-lactamases are confined to the periplasmic between the outer membrane and the inner membrane
- thin peptidoglycan
- 2 (inner & outer): The outer membrane excludes drugs, but some drugs can still get in through porins.
- peptidoglycan contains meso-diaminopimelic acid residue (DAP)
- peptidoglycan is cross-linked by a bridge between the DAP residue of one strand and the D-Ala of another
How does transpeptidase cross-link peptidoglycan strands?
- -OH of the transpeptidase (serine residue) binds where the amide is in the peptidoglycan between 2 D-Ala residues
- a tetradehral intermediate is formed
- a oxygen double bond is formed, which kicks out the terminal D-Ala residue
- the terminal lysine of a new peptidoglycan comes and attacks the ester (oxygen double bond)
- the oxygen double bond is formed again, which kicks out the transpeptidase. Now two peptidoglycans are connected & the transpeptidase is recycled!
What is the MOA of penicillins?
Penicillins inhibit the transpeptidases that cross-link the peptidoglycan. This results in a defective bacterial cell wall -> cell death. The reactivity of the β-lactam system is due to the highly strained 4-membered ring, and because the ketone carbonyl is more reactive than the amide carbonyl due to steric inhibition.
- penicillin fools the transpeptidase into thinking it’s D-Ala-D-Ala, so the serine residue on the transpeptidase attacks oxygen double bond on the penicillin
- this forms a tetrahedral intermediate
- an ester forms, which results in an extremely stable compound that is inactive
Why do penicillins display selective toxicity for bacteria but not the host?
The bacterial transpeptidases do not catalyze reactions with host cell proteins because the bacterial substrate contains unnatural D-Ala amino acid residues that are not found in the host cell proteins (mammalian cell proteins have L-Ala, not D-Ala).
What are the mechanisms of bacterial resistance for penicillins?
- Decreased cellular uptake of the drug
- Mutation of the penicillin-binding proteins to decrease their affinity for penicillins
- efflux pump that pumps the antibiotic out of the cell
- production of β-lactamases that hydrolyze the β-lactam moiety (β-lactamase binds to penicillin, forms an intermediate, then the compound lyses to form an inactive penicillin & regenerated β-lactamase)
What is the mechanism of penicillin allergenicity?
Allergenicity of β-lactam antibiotics results from the drug acting as a hapten. It acetylates host cell proteins, which then raises antibodies that result in an allergic reaction.
The allergic reaction originates from the pharmacophore of the drug, which means we can’t overcome it by structural manipulation & if you’re allergic to one β-lactam, you’re likely allergic to almost all of them.
How do penicillins degrade under acidic and basic conditions?
Acidic: main degradation products are Benzylpenicillenic Acid, Benzylpenillic Acid, and Benzylpenicilloic Acid
- With the help of anchimeric assistance, the side chain attacks the β-lactam ring. After going through a few intermediates, A Penicilloic Acid is formed. If the side chain is rotated, eventually A Penillic Acid will be formed. The A Penicillenic Acid is formed when a sulfhydryl group is eliminated during the conversion of A Penicilloic Acid -> A Penillic Acid.
- If the side chain is more election attracting, it will be less likely to degrade.
Basic:
- hydroxide from basic conditions attacks the carbonyl of the β-lactam, eventually resulting in A Penicilloic Acid
- no anchimeric assistance
What is the main chemical feature of penicillins that confers resistance to degradation under acidic conditions?
If the side chain is more election attracting (more electrophilic), it will be less likely to degrade.
How does degradation under acidic and basic conditions affect biological activity?
- Penicillin hydrolysis products have no antibiotic activity
- Hydrolysis of the β-lactam is irreversible
What conditions promote penicillin degradation?
Heavy metal ions catalyze penicillin degradation (so these should be kept away from penicillin solutions).
How does the lipophilicity of penicillins affect their serum protein binding?
The more lipophilic the side chain is, the more highly protein bound the penicillin will be.
How does serum protein binding of penicillins affect penicillin degradation?
Protein binding protects drugs from degradation.
How does serum protein binding of penicillins affect their half-life?
Half-life is usually not affected by protein binding, since the penicillins’ dissociation rates from the protein are fast and the renal excretion rates are rate-limiting.
How does penicillin serum protein binding affect bioavailability?
Protein binding reduces bioavailability by reducing the effective concentration of the free drug.
What are the mechanisms of penicillin excretion?
- Renal (90% tubular secretion, 10% glomerular filtration)
- Biliary
Most penicillins are excreted through the kidneys (except nafcillin, which is cleared by biliary excretion)
How does renal disease affect penicillin half life?
Half lives of penicillins that are excreted by the kidneys are prolonged in cases of renal disease or failure
How does probenecid affect penicillin half life and what is the mechanism involved?
Probenecid and penicillins are both anionic. So when the penicillin is administered with probenecid, it competes for the secretion mechanism, which in turn extends the half life of the penicillin.
How are penicillins distributed in the body?
Penicillins are distributed to most tissues except the CSF. But, if the meninges are inflames, some parenteral penicillins can enter the CSF. This is good because some can then be used for the treatment of meningitis.
How are penicillins synthesized?
Synthetic penicillins are made by acylation of 6-aminopenicillanic acid (6-APA)
What is the β-lactam nomenclature? (5 classes)
penam - house with a sulfur on the roof & a garage
penem - house with a sulfur on the roof, double bond on the wall, & a garage
carbapenem - house with a double bond on the wall & a garage
cephem - house with a sulfur on the room, a basement, a double bond in the basement, & a garage
monobactam - just a garage
What are the main differences between phenoxymethyl penicillin (pen V) and penicillin (pen G) and what chemical feature is responsible for this difference?
Main difference is that penicillin V is more stable in acid due to the electronegative ether oxygen in the side chain. This means Pen V is less nucleophilic, so it decreases participation in the β-lactam hydrolysis degradation reaction.
- Pen V more stable in the stomach
- β-lactamase sensitivity and toxicity are about the same as penicillin G though
What major penicillins are β-lactamase-resistant parenteral or oral penicillins, β-lactamase-sensitive, broad-spectrum, oral penicillins?
β-lactamase resistant parenteral penicillins:
- Methicillin
- Nafcillin
- Oxacillin
β-lactamase resistant oral penicillins:
- Oxacillin
- Cloxacillin
- Dicloxacillin
β-lactamase sensitive, broad-spectrum, oral peniciillins:
- Piperacllin
- Azlocillin
- Mezlocillin
What is the main chemical feature of methicillin that confers resistance to hydrolysis by β-lactamases?
Steric hindrance of the nucleophilic attack by the enzyme on the β-lactam carbonyl. The phenyl ring is directly attached tot he amide carbonyl & there are two methoxy substituents in the ortho position. If you take off a methoxy or if you change the position to para, it would be sensitive to β-lactamases again.
Why is methicillin so unstable to hydrolysis under acidic conditions?
It is unstable due to electron donation toward the amide carbonyl oxygen by the ortho methoxy groups, which mades the amid carboxyl oxygen more nucleophilic.