Exam 3 Flashcards
(180 cards)
What is the difference between “bactericidal” and “bacteriostatic”? Give a specific example of each approach.
The difference between bactericidal and bacteriostatic drugs is that bactericidal drugs kill the bacteria cells and can eradicate an infection while bacteriostatic drugs suppress an infection but do not eradicate it. An example of a bactericidal antibiotic is penicillin a beta-lactam that inhibits the production of peptidoglycan promoting cell lysis. A bacteriostatic antimicrobial drug is sulfa drugs which inhibit folic acid synthesis. These drugs inhibit but don’t kill bacterial infections however they can be combined with other drugs (synergy) to be more effective and be bactericidal with the other drug.
Define “sterilization” and give two examples of ways things are sterilized.
Sterilization is completely removing all endospores, vegetative cells and viruses from a certain object or area. One way things are sterilized is by dry heat, like a Bunsen burner to burn the loop after inoculation. Another way is by ionizing radiation like gamma rays and X-rays, which can be used for sterilizing heat sensitive materials like pharmaceutical drugs and medical equipment.
Compare and contrast “sterilization” and “pasteurization”. Provide two ways the processes are similar, and two ways they are different.
terilization and pasteurization are both processes used to eliminate harmful microorganisms in various substances, but they differ in the degree of microbial reduction achieved and the method used to achieve it.
Two ways sterilization and pasteurization are similar:
Both processes aim to eliminate microorganisms: Both sterilization and pasteurization aim to eliminate microorganisms, including bacteria, viruses, fungi, and spores. They are used to prevent spoilage, extend shelf life, and improve the safety of various products, including food, pharmaceuticals, medical devices, and laboratory equipment.
Both processes use heat: Heat is the most common method used in both sterilization and pasteurization. High temperatures can kill or inactivate microorganisms by denaturing their proteins, disrupting their cell membranes, or causing other forms of cellular damage.
Two ways sterilization and pasteurization are different:
Degree of microbial reduction: Sterilization aims to eliminate all microorganisms from a substance, achieving a 100% reduction in microbial count. In contrast, pasteurization aims to reduce the number of microorganisms to a level that is considered safe for consumption or use, usually by at least 99.9% or more. Pasteurization does not eliminate all microorganisms but rather reduces the number of pathogenic microorganisms to a safe level.
Method of application: Sterilization typically involves the use of more extreme conditions than pasteurization. Sterilization methods include exposure to high temperature (e.g., autoclaving), chemicals (e.g., ethylene oxide), radiation (e.g., gamma rays), or filtration (e.g., through a membrane with small pores). Pasteurization, on the other hand, typically involves heating a substance to a specific temperature for a specific duration, with variations such as high-temperature short-time (HTST) pasteurization or ultra-high temperature (UHT) pasteurization.
Why can you sterilize things more quickly (and at lower temperatures) in an autoclave than in a dry-heat oven?
Moist heat is generally more effective than dry heat in destroying microorganisms, and it can achieve sterilization at lower temperatures and shorter exposure times. This is because moist heat works by denaturing and coagulating enzymes and proteins within the microbe, leading to its death. The presence of moisture in the environment helps to transfer heat more efficiently to the microorganisms and disrupt their cellular structures. Examples of moist heat methods include boiling, autoclaving, and pasteurization.
In contrast, dry heat works by slowly dehydrating the microbe and damaging its cellular structures. Dry heat sterilization requires much higher temperatures and longer exposure times than moist heat methods to achieve the same level of microbial destruction. This is because dry heat does not transfer heat as efficiently as moist heat, and without the presence of moisture, the microorganisms are more resistant to heat. Examples of dry heat methods include incineration, hot air ovens, and dry heat blocks
What is the effect of DNA damage done to bacteria by UV light? Does irradiation of food make the food radioactive? Explain.
UV light damages DNA by creating pyrimidine dimers in DNA strands, and this can lead to genetic mutations that could lead to impaired cell functions and cell death.
Irradiating food does not make food radioactive. The material would need high atomic elements, which food generally does not contain, and if extreme doses of radiation were used to attempt to make food radioactive, it would more likely destroy the food via thermal or chemical damage.
How does filtration work, and when is it appropriate to use filtration?
Filtration works via a semi-porous filter that only allows things that are smaller than the pores through and blocks everything else that is bigger than the pores. It is appropriate to use filtration when you want to isolate heat-sensitive products such as proteins, viral particles, phages, etc.
List two different disinfectants that you might find in a surgical suite and explain how they work.
Bisphenol hexachlorophene is a disinfectant which is the active ingredient of pHisoHex, which is a cleansing detergent often used for handwashing in hospital settings. pHisoHex is effective against gram-positive bacteria, such as microbes causing staphylococcal and streptococcal skin infections.
Phenol is made up of a benzene ring with an -OH group, phenolics are compounds that have this group as their chemical structure. Phenolics like thymol eucalyptol come from plants, however other phenolics can from creosote which is a from coal tar. Phenolics tend to be more stable less toxic and persist on surfaces. They denature proteins and disrupt membranes of
microbes.
How are handwashing with soap and hand-sanitizers different? Explain how each method works. Be specific about chemistry.
Soaps are salts of long-chain fatty acids and have both polar and nonpolar regions, allowing them to interact with polar and nonpolar regions in other molecules. They can interact with nonpolar oils and grease to create emulsions in water, loosening and lifting away dirt and microbes from surfaces and skin. Soaps do not kill or inhibit microbial growth and so are not considered antiseptics or disinfectants.
While hand sanitizers, work by rapidly denaturing proteins, which inhibits cell metabolism by disrupting membranes, which leads to cell lysis.
What is the natural purpose for the production of antibiotics in microorganisms? Use an example to illustrate.
Some microorganisms produce antimicrobial substances that reduce competition from other microbes. One such example is streptomycin which is produced by soil bacteria of the genus Streptomyces.
What are semisynthetic and synthetic drugs? Use penicillins or cephalosporins as examples to comment on what attributes can be optimized by chemically modifying drugs (drug generations).
Semisynthetic drugs are chemically modified drugs that occurs in a lab after isolation from natural resources. Meanwhile synthetic drugs are anti microbial compounds that are synthesized in a lab through chemical reactions.
You are a scientist developing new antibiotics. List THREE different characteristics that you would like to engineer into new antibiotics (in addition to their ability to kill bacteria!).
3 different beneficial characteristics could be:
- Ensuring a low toxicity/minimizing the amount of strain the medications put onto the organs of human body.
- Somehow engineering antibiotics that DON’T lead to increased antibiotic resistance would be pretty convenient.
- Increased specificity of the antibiotics to target exactly what they’re designed to, nothing more, nothing less.
What is selective toxicity? What is the therapeutic index (TI)? Is it good to have a high or a low TI? Use a specific drug to explain.
- selective toxicity is the ability of a drug to target certain types of cells or organisms, while leaving surrounding cells unharmed. The more selective a drug can be the safer it is to use.
- Therapeutic index is a measure of a drugs safety margin. It is the ratio of the dose that produces a therapeutic effect to the dose that produces toxic effects.
- A high therapeutic index = a safer drug, as the therapeutic dose is much lower than the toxic dose. A low therapeutic index = a narrow safety margin, where even small deviations from the the TD can cause toxicity.
- Ibuprofen is a good example of a drug that has a high TI. As one of the NSAIDS it is a common anti-inflammatory and pain reliever. The therapeutic dose for ibuprofen is 200-400 mg while the toxic dose is much higher at 1200 mg or more. Excessive doses of ibuprofen lead to severely negative effects that can cause gastrointestinal or kidney damage.
Do drugs targeting bacterial cell walls have high or low selective toxicity? Briefly explain.
Drugs that target bacterial cell walls have high selective toxicity, because human cells do not make peptidoglycan.
I think if the drug just targets the bacterial cell wall, it’s actually low selective toxicity. The reason is the indiscriminate killing of both the pathogen and the natural microbiota within our body would cause harm to the body since the presence of the natural microbiome is essential for human health.
What enzyme/protein does penicillin target? What is the function of this enzyme? (Hint: this enzyme has two names. What do the two names indicate?)
Penicillin targets the bacteria’s crosslinking transpeptidase enzyme, which is an enzyme that connects amino acids between peptidoglycan monomers and produces the cell wall.
Another name for this enzyme is Penicillin-binding proteins.
This enzyme/protein is inhibited by Penicillin’s beta-lactam ring.
Penicillin binds to the active site of PBPs (Penicillin-binding proteins) and inhibit their function. This leads to the formation of weakened cell walls that are unable to withstand the high internal pressure of the bacterial cytoplasm, resulting in bacterial lysis and cell death.
The names penicillin-binding protein and transpeptidase both refer to the enzyme’s ability to bind penicillin and catalyze the transpeptidation reaction that links peptidoglycan chains in the bacterial cell wall.
What is a β-lactam ring? What enzyme gives some bacteria resistance to the class of drugs that have a β-lactam ring? This enzyme has two names. What do the two names indicate?
The β-lactam ring is responsible for the antibacterial activity of these drugs (such as penicillins, cephalosporins, and carbapenems) by interfering with bacterial cell wall synthesis. The β-lactam ring binds to and inhibits the enzymes that cross-link the peptidoglycan chains that make up the bacterial cell wall and leading to bacterial cell death.
The class of enzymes that give some bacteria resistance to β-lactam antibiotics are called β-lactamases. These enzymes are able to break the amide bond in the β-lactam ring. β-lactamases are produced by bacteria. Some bacteria may produce multiple types of β-lactamases and make them resistant to a broad range of β-lactam antibiotics.
The two names of the enzyme that gives some bacteria resistance to β-lactam antibiotics are β-lactamases and penicillinases. These two names indicate that the enzyme is capable of breaking down the β-lactam ring in β-lactam antibiotics such as penicillins. Penicillinases are a specific type of β-lactamase that are capable of inactivating penicillin antibiotics, rendering them ineffective. The β-lactamase is more commonly used as it encompasses a wider range of enzymes that can inactivate multiple classes of β-lactam antibiotics, including penicillins, cephalosporins, and carbapenems.
Choose a drug that targets the small subunit (30S) of the ribosome and comment on its mechanism of action and potential side effects.
Drug Name: Streptomycin
Mechanism of action: causes mismatches between codons and anticodons, leading to faulty proteins that insert into and disrupt cytoplasmic membrane
Side effects: nephrotoxic (damage to kidneys), neurotoxic (damaging to nervous system), ototoxic (damage to ear)
Choose a drug that targets the large subunit (50S) of the ribosome and comment on its mechanism of action and potential side effects.
Chloramphenicol
1st broad-spectrum antibiotic that was approved by the FDA
Produced by Streptomyces venezuelae
MoA: Inhibition of peptide bond formation
Historically used to treat: meningitis, typhoid, fever, and conjunctivitis
Side effects: gray baby syndrome, suppression of bone marrow production, and anemia
Do drugs targeting metabolism have high or low selective toxicity/TI? Briefly explain. What does it mean to say that Sulfa drugs and TMZ have synergistic effects?
Some drugs targeting metabolism have high selective toxicity. Sulfa drugs and trimethoprim target the folic acid synthesis pathway. These drugs are selectively toxic to bacteria because humans get folic acid from food instead of synthesizing it intracellularly. You could say that these two drugs work together synergistically because the combined effect of the drugs is greater than the sum of their effects separately.
Why is polymyxin B not used in an oral form? Does it have high or low TI?
Since the mechanism of action for polymyxin B is to target the membrane, this unfortunately makes it not selectively toxic. These drugs also target and damage the membrane of cells in the kidney and nervous system when administered systemically. Because of these serious side effects and their poor absorption from the digestive tract, polymyxin B is used in over-the-counter topical antibiotic ointments.
Why are broad-spectrum antibiotics sometimes dangerous in treating infections? What is superinfection?
Broad-spectrum antibiotics can be dangerous because they are more likely to lead to drug resistant bacteria and can cause damage to the normal microbiota, which increases the risk of a superinfection. A superinfection is a second infection occurring on top of a preexisting infection. A superinfection usually occurs when an antibiotic kills the protective microbiota, which allows another antibiotic resistant pathogen to thrive and reproduce.
Describe the urinary organs, defenses and normal biota.
The basic structures of the urinary tract are common in males and females however locations of these structures may be unique. Below is a common structure found in both males and females. The kidneys carry out the urinary system’s primary functions of filtering the blood and maintaining the water and electrolyte balance. The kidneys are composed of millions of filtration units called the nephrons. Fluids, electrolytes and molecules from the blood passes from the glomerulus (a capillary bed) into the nephron which creates a filtrate that becomes urine. Urine that is collected in each kidney empties through a ureter and drains to the urinary bladder which stores the urine. Urine is then released from the bladder to the urethra which transports it to be excreted from the body through the opening of the urethra called urinary meatus.
The flushing action of urine is the main defense of the urinary organs. This includes the kidneys, ureters, and urinary bladder. Urine passing out of the body washes out transient microorganisms and preventing them from taking up residence.
The normal microbiota of males is found primarily within the distal urethra and it includes bacterial species that are commonly associated with the skin microbiota. The normal microbiota of women is found within the distal one third of the urethra and the vagina. The normal microbiota of the vagina becomes established shortly after birth and is a complex and dynamic population of bacteria that fluctuates in response to environmental changes. Members of the vaginal microbiota plays an important role in the nonspecific defense against vaginal infections and sexually transmitted infections by occupying cellular binding sites and competing for nutrients. The production of lactic acid by members of the microbiota provides an acidic environment within the vagina that also serves as a defense against infections.
Why is it more common for women to get UTIs? Use the anatomy difference to explain.
It is more common for women to get UTIs because the urethra is shorter than a male urethra, making it easier for bacteria to travel through and enter the urinary tract. It is also so close to the vagina and anus that there is a higher chance of bacteria.
Give two signs and symptoms of urinary tract infections (UTIs)? Use the prefixes and suffixes in Table 15.1Links to an external site. to explain what each term means. (Note: each student should only talk about two; this question is designed for multiple students to discuss.)
Two signs and symptoms of a UTI are urethritis and cystitis. The suffix -itis means inflammation and the prefix cyst- means bladder, so cystitis is inflammation of the bladder. The prefix urethr/o- represents urethra and the suffix -itis means inflammation, so urethritis is inflammation of the urethra.
What are some characteristics of K. pneumoniae? If K. pneumoniae is one of your unknown bacteria, what test results would you get?
K. pneumoniae is a gram-negative bacteria. It is rod shaped bacteria, capsule producing, lactose fermenter, nonmotile, and facultative anaerobic.
an image of K. pneumoniae colonies on MacConkey Agar. It may be beneficial to consider which characteristics of K. pneumoniae contribute to what you see on the plate based on what you know about MAC.