Feb caps Flashcards

1
Q

write the symbol equation for photolysis

A

H2O –> ½ O2 + 2e- + 2H+

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2
Q

Describe photoionisation of chlorophyll

A

light energy is absorbed by the chlorophyll and
the energy results in the electrons becoming
excited and raising up an energy level to leave
the chlorophyll. Therefore the chlorophyll has
been ionised by light. Some of the energy from
the released electrons is used to make ATP and
reduced NADP in chemiosmosis.

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3
Q

Where does the light-dependent reaction (LDR) occur?

A

Thylakoid membrane

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4
Q

What are the three key reactions in the LDR?

A

Photoionisation of chlorophyll
Photolysis
Chemiosmosis

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5
Q

describe chemiosmosis in 4 key
stages

A

Step 1: The electrons that gained energy and left the
chlorophyll move along a series of proteins embedded
within the thylakoid membrane.
Step 2: As they move along, they release energy and some of
the energy from electrons is used to pump the protons
across chloroplast membranes.
Step 3: An electrochemical gradient is created. The protons
pass through the enzyme ATP synthase, which results in
the production of ATP.
Step 4: The protons combine with the co-enzyme NADP to
become reduced NADP. As the protons move from a high to
low concentration gradient this is known as chemiosmosis.

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6
Q

why is the LIR temperature sensitive?

A

It involves the enzyme Rubisco

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7
Q

What is the role of ATP in the Calvin cycle?

A

To provide the energy to reduce GP to TP
To provide the energy to regenerate RuBP from
TP

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8
Q

What is the role of NADPH in the Calvin cycle?

A

To provide an H to reduce GP to TP

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9
Q

What is the triose phosphate used for?

A

1 To donate one carbon each turn of the cycle to
go towards making a hexose sugar
2 To regenerate RuBP so the cycle can continue

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10
Q

Which molecules from the LDR are used in the
LIR?

A

1 ATP
2 Reduced NADP

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11
Q

Where does the LIR occur?

A

The stroma of the chloroplast

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12
Q

What can the hexose sugars made be used
for?

A

Whilst glucose is the product, this
monosaccharide can join to form disaccharides
such as sucrose, and
polysaccharides such as cellulose and starch. It
can also be converted into glycerol and
therefore combine with fatty acids to make
lipids for the plant.

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13
Q

draw the calvin cycle

A
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14
Q

draw glycolysis

A
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15
Q

describe glycolysis

A

Substrate level phosphorylation
- The glucose has 2 phosphate
groups added to it from 2 ATP
molecules.
Phosphorylation makes the
glucose-2-phosphate unstable
and it splits into two x 3-carbon
compounds, triose phosphate
(TP).
The 2 TP molecules are oxidised
to form 2 pyruvate molecules by
removing an H from each. The H
is picked up by 2 NAD molecules
to become reduced NAD. This
process also releases 4 ATP.

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16
Q

Where do the four stages of aerobic
respiration occur?

A
  1. Glycolysis - cytoplasm
  2. Link reaction - Mitochondrial matrix
  3. Krebs cycle - Mitochondrial matrix
  4. Oxidative Phosphorylation - Cristae /inner
    mitochondrial membrane
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17
Q

What are the products of glycolysis?

A

2 x pyruvate
Net gain of 2 ATP
2 X reduced NAD

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18
Q

describe the key stages in
the link reaction.

A

The pyruvate made in
glycolysis is oxidised to
acetate.
NAD picks up the hydrogen
and becomes reduced NAD.
A carbon atom is lost as
carbon dioxide.
Acetate combines with
coenzyme A to produce acetyl
coenzyme A.

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19
Q

draw the link reaction

A
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20
Q

describe the key stages in the
Krebs cycle.

A

The acetyl CoA reacts with a four-carbon molecule, releasing
coenzyme A and producing a six-carbon molecule that enters the
Krebs cycle.
In a series of oxidation-reduction reactions, the Krebs cycle
generates 8 reduced coenzymes, 2 ATP by substrate-level
phosphorylation, and 4 carbon dioxides are lost.

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21
Q

draw the krebs cycle

A
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22
Q

What are the products of the Krebs cycle (from 1
glucose molecule originally) ?

A

6 x reduced NAD
2 x reduced FAD
4 x carbon dioxide
2 x ATP

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23
Q

What is the role of oxygen in oxidative
phosphorylation?

A

Oxygen is the final electron acceptor in the electron
transport chain. The oxygen combines with the
electrons and the protons to form water.

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24
Q

what happens to the reduced co-enzymes in this
stage?

A

All of the accumulated reduced coenzymes release
the hydrogens which are split into protons (H+) and
electrons (e-).

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25
Q

describe how ATP is produced in oxidative
phosphorylation.

A

electrons are passed down a series of electron carrier proteins
embedded in the inner mitochondrial membrane, losing energy as they
move along (electron transport chain). The small amount of energy the
electrons release pumps protons from the mitochondrial matrix into the
intermembrane space by active transport.
This creates an electrochemical gradient across the membrane.
Therefore, the protons move down the electrochemical gradient back
into the matrix via ATP synthase making ATP.

26
Q

Where does anaerobic respiration occur?

A

the cytoplasm

27
Q

Why is it important that NAD is re-oxidised in
anaerobic respiration?

A

So that it can be reused in glycolysis and ensure ATP
continues to be produced.

28
Q

describe the nitrogen cycle (include
ammonification, nitrification, nitrogen fixation and denitrification)

A

Nitrogen-fixing bacteria can break the triple bond between the two
nitrogen atoms in nitrogen gas in the atmosphere and fix this
nitrogen into ammonium ions. The bacteria are either free-living in the
soil or symbiotic (mutualistic relationship), living in the root nodules
of plants. This is common in leguminous plants such as clover and
beans.
Nitrification
The ammonium ions in the soil are converted to nitrite and then
nitrate ions in the soil by nitrifying bacteria. This is a two-stage
oxidation reaction.
Denitrification
This stage is not useful as it returns the nitrogen in compounds back
to nitrogen gas in the atmosphere, so it cannot be absorbed by plants.
Anaerobic denitrifying bacteria do this.
Ammonification
Proteins, urea and DNA can be decomposed in dead matter and waste
by saprobionts. These are bacteria and fungi that can digest waste
extracellularly and return ammonium ions to the soil; this is
saprobiotic nutrition.

29
Q

describe The role of saprobionts in
decomposition.

A

These microbes will respire on dead or
waste organic matter. This will cause
decay and recycle nutrients into the soil
so plants can absorb the
nitrates/phosphates via active transport
in their root hair cells

30
Q

describe the role of mycorrhizae

A

Mycorrhizae are fungal associations
between plant roots and beneficial fungi.
The fungi entwined around the plant
roots provide a larger surface area for
water and mineral absorption. The fungi
part of the mycorrhizae acts like a
sponge and can absorb and hold onto
water and minerals surrounding the root

31
Q

describe The role of bacteria in the nitrogen
cycle

A

Bacteria are used in saprobiotic
nutrition, ammonification, nitrification,
nitrogen fixation and denitrification to
convert nitrogen-containing compounds
into other N-containing compounds

32
Q

Why do organisms need
nitrogen?

A

To create amino
acids/proteins, DNA,
RNA and ATP.

33
Q

What is phosphorous needed for?

A

To create DNA, RNA, ATP and phospholipid bilayers

34
Q

Describe how the phosphorous cycle differs from the nitrogen
cycle

A

Phosphorous is not found as a gas in the atmosphere. Instead, it
is mainly found as a phosphate ion, in mineral form in
sedimentary rocks.

35
Q

Why are fertilisers needed when growing
crops?

A

To replace the nitrate and phosphate ions lost
when plants are harvested and removed from
nutrient cycles as crops.

36
Q

What are the two types of fertilisers?

A

natural (manure)
artificial (inorganic chemicals).

37
Q

What are the pros and cons of each type of
fertiliser?

A

Natural fertilisers are cheaper, and often free if the
farmer owns animals. However, the exact minerals
and proportions cannot be controlled.
Artificial fertilisers are chemicals created to
contain exact proportions of minerals. Their high
solubility means that larger quantities are washed
away with rainfall and therefore have a greater
impact on the environment.

38
Q

What is leaching?

A

This is when water-soluble compounds are washed
away, often into rivers or ponds.

39
Q

Describe eutrophication (4 marks)

A

This is when nitrates leached from fertilised fields
stimulate the growth of algae in the pond.
The excessive growth of algae creates a blanket on the
surface of the water which blocks out light.
As a result, the plants below cannot photosynthesise
and die. Bacteria within the water feed and respire on
the dead plant matter. This results in an increase in
bacteria, which are all respiring and using up the
oxygen within the water.
Eventually, fish and other aquatic organisms die due to
the lack of dissolved oxygen in the water.

40
Q

What is a taxes response?

A

A simple response in which an organism will move its entire
body towards a favourable stimulus or away from an
unfavourable stimulus.

41
Q

What is a kinesis response?

A

When an organism changes the speed of movement and the
rate it changes direction.

42
Q

Name 3 stimuli that simple organisms respond to
by taxes and kinesis

A

1 light
2 moisture
3 chemicals

43
Q

More complex organisms have a nervous system.
Draw a flow diagram to show a simple reflex
response.

A

Stimulus –> Receptor –>Coordinator–>Effector–
>Response

44
Q

Which two structures comprise the central
nervous system (CNS)?

A

the brain and spinal cord

45
Q

which structures comprise the peripheral nervous
system (PNS)?

A

Receptors, sensory and motor neurones

46
Q

Which stimuli does the Pacinian corpuscle detect?

A

Pressure

47
Q

Where do you find many Pacinian corpuscle receptors?

A

Deep in the skin of the fingers and feet

48
Q

draw and label a pacinian corpuscle

A
49
Q

Describe how the pressure detected in the Pacinian
corpuscle can generate an action potential.

A

In the resting state, Na+ channels are too narrow for Na+ to
diffuse into the sensory neurone therefore resting potential
is maintained. When pressure is applied it deforms the
neurone plasma membrane, stretches and widens the Na+
channels so Na+ diffuses which leads to the establishment
of a generator potential.

50
Q

Describe how the resting potential is maintained

A

The resting potential is maintained by a sodium-potassium
pump, involving active transport and therefore ATP. The
pump moves 2 K+ions in and 3 Na+ ions out. This creates an
electrochemical gradient and results in K+ diffusing out and
Na+ diffusing in. Due to the membrane being more
permeable to K+, more are moved out resulting in the -70mV.

51
Q

draw and label the graph to show where the following are occuring:
Resting state
Repolarisation
Depolarisation
Refractory period

A
52
Q

describe depolarisation

A
  1. A stimulus
    provides the energy
    that can cause the
    sodium voltagegated channels in
    the axon
    membrane to open.
    This causes Na+ to
    diffuse in, which
    increase the
    positivity inside of
    the axon.
  2. This causes more voltage-gated
    channels to open, so even more
    Na+ diffuse in.
  3. When a threshold of +40mV is
    reached inside the axon, the voltagegated sodium channels close and
    instead voltage-gated potassium ion
    channels open
53
Q

describe repolarisation

A

this results in potassium ions
diffusing out, and the axon becomes
negative again and is repolarised.

54
Q

describe hyperpolarisation

A

Temporarily the axon becomes more
negative than the -70mV and is hyperpolarised.

55
Q

What is meant by the all-or-nothing principle?

A

If the depolarisation does not exceed the -55 mV threshold,
then an action potential and the impulse are not produced
(Nothing).
Any stimulus that does trigger depolarisation to -55mV will
always peak at the same maximum voltage (All). Bigger stimuli
instead increase the frequency of action potentials.

56
Q

State the three factors that affect the speed of
conductance and explain how

A

1 myelination and saltatory conduction
here are gaps between the myelin sheath, called
nodes of Ranvier. The action potential jumps from
node to node (saltatory conduction), which means
the action potential travels along the axon faster as
it doesn’t have to generate an action potential
along the entire length (just at the nodes of
Ranvier).
2 Axon diameter
With a wider diameter, the speed of conductance
increases. A wider diameter means that there is
less leakage of ions and therefore action potentials
travel faster.
3 Temperature
A higher temperature increases the speed of
conductance for two reasons:
1. The ions diffuse faster
2. The enzymes involved in respiration work faster.
Therefore there is more ATP for active transport in
the Na+/K+ pump.

57
Q

What is the refractory period and give three reasons why it is
important

A

After an action potential has been generated, the membrane enters a refractory
period when it can’t be stimulated, because sodium channels are recovering
and can’t be opened.

This is important because:
1. It ensures that discrete impulses are produced, meaning that an action
potential cannot be generated immediately after another one to make sure
that each is separate from another.
It ensures that action potentials travel in one direction. This stops the action
potential from spreading out in two directions which would prevent a
response.
It limits the number of impulse transmissions. This is important to prevent
overreaction to a stimulus and therefore overwhelming the senses.

58
Q

describe the actions
at a cholinergic synapse

A

An action potential arrives at the synaptic knob. Depolarisation of synaptic knob
leads to the opening of Ca2+ channels and Ca2+ diffuses into the synaptic knob.
Vesicles containing acetylcholine neurotransmitters move towards and fuse
with the presynaptic membrane. Acetylcholine is released into the synaptic
cleft.
Acetylcholine diffuses down a concentration gradient across the synaptic cleft,
to the post-synaptic membrane; acetylcholine binds by the complementarity of
shape to receptors on the surface of the post-synaptic membrane.
Na+ ion channels on the post-synaptic membrane open and Na+ diffuse in; if
enough acetylcholine binds, and enough Na+ diffuse in to raise the membrane
potential above the -55mV threshold, then the post-synaptic neurone becomes
depolarised.
The acetylcholine is degraded by acetylcholinesterase into choline and acetate
and released from the receptor; the Na+ channel close and the post-synaptic
neuron can re-establish resting potential; the neurotransmitter is transported
back into the presynaptic neuron where it is recycled.

59
Q

What is meant by summation?

A

The rapid build-up of neurotransmitters in the synapse helps generate an
action potential

60
Q

What is the difference between spatial and temporal
summation?

A

Spatial summation: many different neurones collectively trigger a new action
potential by combining the neurotransmitter they release to exceed the threshold
value.
Temporal summation: One neurone releases neurotransmitter repeatedly over a
short period of time to add up to enough to exceed the threshold value

61
Q
A
62
Q
A