Final Test Flashcards
(148 cards)
Describe the role of IgA in mucosal immunity
- What cell produces mucus?
- What cell produces IgA?
- When is IgA the first line of defense for the body?
Describe the role of IgA in mucosal immunity
- What cell produces mucus?
- Goblet cells produce mucus and protect the airway and lung tissue from inspired particles.
- Goblet cells extend to the end of the bronchi.
- What cell produces IgA?
- Mostly B-Cells
- When is IgA the first line of defense for the body?
- Secretory IgA serves as the first line of defense in protecting the intestinal epithelium from enteric toxins and pathogenic microorganisms.

Explain how the mucosal immune system can both prevent responses to moral flora and also effectively respond to potential pathogens.
- Why we don’t have immune responses to these commensal bacteria?
- In order to initiate appropriate adaptive immune responses to pathogens in the GI tract, antigens need to cross the intestinal mucosa and enter the underlying secondary lymphatic tissues. What are the two main ways in which this occurs?
- What T cells are elicited by commensal bacteria? by pathogens?
Explain how the mucosal immune system can both prevent responses to moral flora and also effectively respond to potential pathogens.
- Why we don’t have immune responses to these commensal bacteria?
- Dendritic Cells in the Lamina Propria only are weakly activated in the presence of commensal bacteria and so induce Tregs.
- In order to initiate appropriate adaptive immune responses to pathogens in the GI tract, antigens need to cross the intestinal mucosa and enter the underlying secondary lymphatic tissues. What are the two main ways in which this occurs?
- 1. Transcytosis of antigens through M cells to be delivered to immune cells within Peyer’s patches.
- 2. Dendritic cells can capture antigens and transport them to secondary lymphatic tissue. Dendritic cells extend projections between adjacent epithelial cells, without disrupting the tight junctions. Process and present antigens to T cells within the secondary lymphatic tissues.
- What T cells are elicited by commensal bacteria? by pathogens?
- Commensals will most likely elicit Tregs
- Pathogens should elicit Th1, Th2, or Th17 and CTLs

- Know anatomical locations of mucosal-associated lymphoid tissues.*
- What are the 6 areas of the body where mucosal-associated lymphoid tissues are located?
- Know anatomical locations of mucosal-associated lymphoid tissues.*
- What are the 6 areas of the body where mucosal-associated lymphoid tissues are located?
- GI tract
- Respiratory tract
- Urogenital tract
- Salivary glands
- Lacrimal glands
- Mammary glands
Mr. Slug
Be able to describe a typical immune response to an extracellular bacteria, intracellular bacteria, and fungus.
extracellular bacteria
- What 2 cells phagocytose extracellular bacteria?
- What two molecules from gram (-) and gram (+) activate the lectin complement cascade?
- What Ig molecule opsonizes extracellular bacteria?
Be able to describe a typical immune response to an extracellular bacteria, intracellular bacteria, and fungus.
extracellular bacteria
- What 2 cells phagocytose extracellular bacteria?
- Phagocytosis by neutrophils and macrophages
- What two molecules from gram (-) and gram (+) activate the lectin complement cascade?
- Gram (-) = peptidoglycan
- Gram (+) = LPS
- What Ig molecule opsonizes extracellular bacteria?
- IgG opsonizes bacteria enhancing phagocytosis

Be able to describe a typical immune response to an extracellular bacteria, intracellular bacteria, and fungus.
Intracellular bacteria
- What pathway processes pathogens and their products found in the cytosol for MHC presentation?
- What kind of T-cell activation is associated with MHC Class I?
- How do these T-Cells kill cells?
- What happens when T-h cells secrete a large amount of IFN-Gamma?
Be able to describe a typical immune response to an extracellular bacteria, intracellular bacteria, and fungus.
Intracellular bacteria
- What pathway processes pathogens and their products found in the cytosol for MHC presentation?
- Pathogens and their products found in the cytosol (i.e. intracellular bacteria) are processed for MHC presentation by the endogenous pathway.
- What kind of T-cell activation is associated with MHC Class I?
- CD8 T cells.
- How do these T-Cells kill cells?
- CD8 T cells then kill infected cells via FAS/FASL or perforin.
- What happens when T-h cells secrete a large amount of IFN-Gamma?
- T-h cells secreting large amounts of IFN-Gamma which further activate the CD8 T cells

Be able to describe a typical immune response to an extracellular bacteria, intracellular bacteria, and fungus.
Fungus
Innate, Humoral, and Cell-mediated immunity are important for a protective immune response to fungal infections
- What 2 molecules, secreted by CD4 T-h cells, play a role in the adaptive immune response against fungi?
- What interleukin signal is responsible for the secretion of defensins and antifungal molecules?
- What part of the fungi usually triggers the alternative and lectin complement pathways
- What three things signal the end of an infection?
Be able to describe a typical immune response to an extracellular bacteria, intracellular bacteria, and fungus.
Fungus
Innate, Humoral, and Cell-mediated immunity are important for a protective immune response to fungal infections
- What 2 molecules, secreted by CD4 T-h cells, play a role in the adaptive immune response against fungi?
- IFN-Gamma (TH1) and IL-17 (TH17) secreted by CD4 T-Helper
- What interleukin signal is responsible for the secretion of defensins and antifungal molecules?
- Signaling through IL-17R leads to the secretion of defensins, antifungal molecules
- What cells have increased killing activity because of the answer above?
- These cytokines also enhance killing and ingestion by innate effector cells like macrophages and neutrophils
- What part of the fungi usually triggers the alternative and lectin complement pathways
- The alternative and lectin complement pathways can be triggered by fungal cell wall components
- What three things signal the end of an infection?
- Presence of T-reg cells, IL-10, and M2-cells usually signal an infection has resolved.

Define toxic shock and explain the mechanism behind it.
- What does extracellular bacterial infection produce that causes a toxic shock?
- What do T-Cells bind to because of the superantigen? What does this lead to? Is this specific binding, or non-specific binding?
- What do patients usually present with?
- What organism is the usual cause?
Define toxic shock and explain the mechanism behind it.
- What does extracellular bacterial infection produce that causes a toxic shock?
- Results from the production of a superantigen.
- What do T-Cells bind to because of the superantigen? What does this lead to? Is this specific binding, or non-specific binding?
- Superantigen causes binding between host T-cells and MHC II receptors. Helper T cells express CD4 molecules, which bind to MHCII on antigen-presenting cells.
- This interaction leads to the release of cytokines and further immune system activation.
- This nonspecific binding between host T cells and MHC II receptors by the superantigen leads to massive T cell activation.
- What do patients usually present with?
- Massive T cell activation with the release of cytokines leads to fever, hypotension, and a defuse sunburn-like rash.
- Classically the nidus for infection is from a forgotten tampon in the vagina, but the most common presentation to clinics is from nasal packing after a nosebleed that has been kept in for too long.
- What organism is the usual cause?
- Staphylococcus aureus is the most common cause, although β-hemolytic group A streptococci can cause a similar presentation.
Define toxic shock and explain the mechanism behind it.
Toxic Shock can lead to septic shock
- What are the two big hallmarks of septic shock?
- How does septic shock relate to deaths in the ICU
- In high concentrations, what molecule will lead to:
- Fever
- Induces macrophages to release the inflammatory cytokines IL-1 and IL-6
- Activates coagulation pathways
- Suppresses bone marrow proliferation
- Cachexia (wasting of muscle/fat)
Define toxic shock and explain the mechanism behind it.
Toxic Shock can lead to septic shock
- What are the two big hallmarks of septic shock?
- Disseminated intravascular coagulation and vascular collapse which is hallmark of septic shock
- How does septic shock relate to deaths in the ICU
- Septic Shock #1 cause of death in ICUs
- In high concentrations, what molecule will lead to:
- Fever
- Induces macrophages to release the inflammatory cytokines IL-1 and IL-6
- Activates coagulation pathways
- Suppresses bone marrow proliferation
- Cachexia (wasting of muscle/fat)
- TNF-ALPHA is the answer
Know examples of how pathogens can evade immune responses and define a successful pathogen
- Evasion of Immune Response
- How do Neisseria gonorrhoeae, Hemophilus influenza & Neisseria meningitides mess with IgA?
- How does Streptococcus pneumonia evade phagocytosis?
- What does Pseudomonas secrete to evade the complement pathway?
- What do Mycobacterium tuberculosis, M. leprae, and Brucella all have in common?
Know examples of how pathogens can evade immune responses and define a successful pathogen
- Evasion of Immune Response
- How do Neisseria gonorrhoeae, Hemophilus influenza & Neisseria meningitides mess with IgA?
- Neisseria gonorrhoeae, Hemophilus influenza & Neisseria meningitides secrete proteases cleaving IgA.
- How does Streptococcus pneumoniae evade phagocytosis?
- Streptococcus pneumoniae has a polysaccharide capsule that resists phagocytosis.
- What does Pseudomonas secrete to evade the complement pathway?
- Pseudomonas secretes elastase that inactivates C3a and C5a.
- What do Mycobacterium tuberculosis, M. leprae, and Brucella all have in common?
- Mycobacterium tuberculosis, M. leprae, and Brucella escape phagolysosome formation.
- How do Neisseria gonorrhoeae, Hemophilus influenza & Neisseria meningitides mess with IgA?
- Know examples of how pathogens can evade immune responses and define a successful pathogen*
- What are the 5 features of a successful pathogen?
Know examples of how pathogens can evade immune responses and define a successful pathogen
- What are the 5 features of a successful pathogen?
- Gains access to a host
- Finds a unique site (niche)
- Avoids host protective mechanisms
- Multiplies in host
- Often causes disease
Understand why toxins and superantigens can cause severe host damage and/or death
- What cells are continually activated by superantigen? What is released?
- What is the difference between the following:
- Exotoxin
- Enterotoxin
- Endotoxin
Understand why toxins and superantigens can cause severe host damage and/or death
- What cells are continually activated by superantigen? What is released?
- It causes binding between host T-cells and MHC II receptors. Helper T cells express CD4 molecules, which bind to MHCII on antigen-presenting cells.
- This interaction leads to the release of cytokines and further immune system activation.
- What is the difference between the following:
- Exotoxin
- Found outside bacteria, heat-labile
- Cytotoxins and Neurotoxins
- Enterotoxin
- An exotoxin that affects cell lining of GI tract
- Endotoxin
- In bacterial cell wall, heat-stable
- Exotoxin
Describe mutation analysis techniques and be able to recommend appropriate tests and interpret the results from that test.
- Do you need to know the mutation you are looking for with the following lab tests:
- PCR-Sizing
- ARMS-PCR
- Oligonucleotide Ligation
- What is each test above used for and name an advantage or disadvantage for each?

Describe mutation analysis techniques and be able to recommend appropriate tests and interpret the results from that test.
- Do you need to know the mutation you are looking for with the following lab tests:
- • Sanger
- • PyroSequence
- • Next-Gen
- What is each test above used for and name an advantage or disadvantage for each?

Identify factors that may affect the disease expressing genes and explain their contribution to human diseases utilizing specific examples.
- What does the image describe? The answer choices are below.
- Locus Heterogeneity
- Mosaicism
- Pleiotropy
- Penetrance - Incomplete
- Penetrance - Age-dependent
- Variable expression
- New mutations (de novo)

Pleiotropy
Identify factors that may affect the disease expressing genes and explain their contribution to human diseases utilizing specific examples.
- What does the image describe? The answer choices are below.
- Locus Heterogeneity
- Mosaicism
- Pleiotropy
- Penetrance - Incomplete
- Penetrance - Age-dependent
- Variable expression
- New mutations (de novo)

New mutations (de novo)
Identify factors that may affect the disease expressing genes and explain their contribution to human diseases utilizing specific examples.
- What does the image describe? The answer choices are below.
- Locus Heterogeneity
- Mosaicism
- Pleiotropy
- Penetrance - Incomplete
- Penetrance - Age-dependent
- Variable expression
- New mutations (de novo)

Mosaicism (germline)

Identify factors that may affect the disease expressing genes and explain their contribution to human diseases utilizing specific examples.
- What does the image describe? The answer choices are below.
- Locus Heterogeneity
- Mosaicism
- Pleiotropy
- Penetrance - Incomplete
- Penetrance - Age-dependent
- Variable expression
- New mutations (de novo)

Penetrance - Incomplete

Identify factors that may affect the disease expressing genes and explain their contribution to human diseases utilizing specific examples.
- What does the image describe? The answer choices are below.
- Locus Heterogeneity
- Mosaicism
- Pleiotropy
- Penetrance - Incomplete
- Penetrance - Age-dependent
- Variable expression
- New mutations (de novo)
Penetrance - Age-dependent

Identify factors that may affect the disease expressing genes and explain their contribution to human diseases utilizing specific examples.
- What does the image describe? The answer choices are below.
- Locus Heterogeneity
- Mosaicism
- Pleiotropy
- Penetrance - Incomplete
- Penetrance - Age-dependent
- Variable expression
- New mutations (de novo)
Locus Heterogeneity

Identify factors that may affect the disease expressing genes and explain their contribution to human diseases utilizing specific examples.
- What does the image describe? The answer choices are below.
- Locus Heterogeneity
- Mosaicism
- Pleiotropy
- Penetrance - Incomplete
- Penetrance - Age-dependent
- Variable expression
- New mutations (de novo)

Variable expression
- Describe the composition, synthesis, mechanism of action and function of lung surfactant.*
- What are the three main functions of lung surfactant?
Describe the composition, synthesis, mechanism of action and function of lung surfactant.
- What are the three main functions of lung surfactant?
- • To increase pulmonary compliance.
- • To prevent atelectasis (collapse of the lung) at the end of expiration.
- • To facilitate recruitment of collapsed airways.
Describe the composition, synthesis, mechanism of action and function of lung surfactant.
- What is the lipid and protein composition of surfactant?
- What is the predominant lipid?
- What cells secrete surfactant?
- Surfactant production in humans begins in Type II alveolar cells during the alveolar sac stage of lung development.
- Lamellar bodies appear in the cytoplasm at about 20 weeks gestation.
- These lamellar bodies are secreted by exocytosis into the surface water layer lining the alveolar airspace, where the surfactant forms a meshwork of tubular myelin.
-
Term infants are estimated to have an alveolar storage pool of approximately 100 mg/kg of surfactant, while preterm infants have an estimated 4–5 mg/kg at birth.
- Think IRDS

Describe the composition, synthesis, mechanism of action and function of lung surfactant.
What does the following describe?
- This is involved with innate host defense, has antimicrobial properties, and helps regulate inflammation.
- SP-A
- SP-B
- SP-C
- SP-D
- Both 1 and 2
- Both 1 and 4
Describe the composition, synthesis, mechanism of action and function of lung surfactant.
What does the following describe?
- This is involved with innate host defense, has antimicrobial properties, and helps regulate inflammation.
- SP-A
- SP-B
- SP-C
- SP-D
- Both 1 and 2
- Both 1 and 4

Describe the composition, synthesis, mechanism of action and function of lung surfactant.
What does the following describe?
- This strongly interacts with phospholipids, is involved with adsorption and spreading of the surfactant on the surface of lungs, and prevents the collapse of the alveolus. It is required for life.
- SP-A
- SP-B
- SP-C
- SP-D
- Both 1 and 2
- Both 2 and 3
Describe the composition, synthesis, mechanism of action and function of lung surfactant.
What does the following describe?
- This strongly interacts with phospholipids, is involved with adsorption and spreading of the surfactant on the surface of lungs, and prevents the collapse of the alveolus. It is required for life.
- SP-A
- SP-B
- SP-C
- SP-D
- Both 1 and 2
- Both 2 and 3






































































