Fundamentals of Medicine Flashcards

(266 cards)

1
Q

Carcinoma

A

Malignant tumour of epithelial cell origin

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Adenocarcinoma

A

Malignant tumour of epithelial cell origin with a glandular growth pattern

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Squamous cell carcinoma

A

Malignant tumour of squamous epithelial cell origin

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Sarcoma

A

Malignant tumour of mesenchymal tissue

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Chondrosarcoma

A

Malignant tumour of cartilage

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Fibrosarcoma

A

Malignant tumour of fibrous tissue

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Osteosarcoma

A

Malignant tumour of bone

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Leiomyosarcoma

A

Malignant tumour of smooth muscle

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Rhabdomyosarcoma

A

Malignant tumour of striated muscle

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What cancer does alcohol cause?

A

Hepatocellular carcinoma

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What cancer does smoking cause?

A

Lung carcinoma

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What cancer does soot cause?

A

Squamous cell carcinoma

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What cancer does asbestos cause?

A

Lung methothelioma

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What cancer does HIV cause?

A

Kaposi sarcoma

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What cancer does EBV cause?

A

Burkitt’s lymphoma

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What cancer does HPV cause?

A

Cervical cancer

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

What cancer does hepatitis C cause?

A

Hepatocellular carcinoma

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

What cancer does H. pylori cause?

A

Gastric cancer

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

Errors in nucleotide excision repair can lead to what condition?

A

Xeroderma pigmentosum

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

Errors in DNA mismatch repair can lead to what condition?

A

Colon cancer

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

Errors in homologous end joining can lead to what condition?

A

BRCA2

Breast and ovarian cancer

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

Paraneoplastic syndrome

A

Non-metastatic systemic effects accompanying malignant disease
Endocrine - Cushing’s disease hypo/hyperglycaemia
Neurological - Lambert-Eaton myastenic syndrome
Musculocutaneous - acnthosis nigricans
Haematological = granulocytosis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

Characteristics of anaplastic tissue

A
Abnormal and prominent nuclei
Hyperchromasia
High nuclear-cytoplasmic ratio
Chromatin clumping 
Loss of polarity
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q

Overall cancer incidences

A

NMSC, breast, lung, colorectal, prostate

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
25
Children cancer incidence
Leukaemia, brain tumour, lymphoma
26
Cancer mortality
Lung, colorectal, breast, prostate, pancreatic
27
Death %
Pancreatic, lung, brain, stomach, oesophagus
28
Where do T cells develop?
Thymus
29
What interleukin promotes T cell clonal expansion?
IL-2
30
What do Th1 T cells release?
IL-2, IFN,g, TNFa
31
What do Th2 T cells release?
IL4, IL5, IL3, IL13
32
What causes Th0-->Th1?
IL-12, IL-23
33
What causes Th0-->Th2?
IL-4
34
What causes Th0-->Th17?
IL-6, IL-21, TGFb
35
What do Th17 cells release?
IL-17
36
What causes Th0-->T-reg?
TGFb
37
Inflammatory cytokines
IL-1, TNFa, IL-6
38
Anti-inflammatory cytokines
IL-10, TGFb
39
Which chemokine drives neutrophil recruitment?
CXCL8
40
Which cytokine increases endothelial stickiness?
TNFa
41
What enzymes do CD8 cells release?
Perforins and granzymes
42
Where do B cells develop?
Bone marrow
43
What does the Fc portion of the antibody dictate?
Function
44
What does the Fab portion of the antibody dictate?
Which antigen the antibody can bind to
45
Which antibody exists as a pentamer?
IgM
46
Functions of antibodies
``` Agglutination Opsonization Antibody-dependant killing Neutralisation Activation of complement ```
47
Secondary lymphoid tissues
``` Spleen Tonsils Lymph nodes Liver Peyer's patches Appendix ```
48
What does TLR4 recognise?
LPS
49
What does TLR5 recognise?
Flagellum
50
What does TLR9 recognise?
CpG DNA
51
What does TRL7 recognise?
Double stranded viral NRA
52
Which antibody is made first?
IgM
53
Which is the most commonly found antibody in the blood?
IgG
54
Which is the second most commonly found antibody in the blood?
IgA
55
MHC class I
Present on all cells Presents endogenous ligands Presents to CD8 T cells
56
MHC class II
Present only on APCs Presents exogenous ligands Presents to CD4 T cells
57
Polygenic
More than one type of each MHC class molecule
58
Polymorphic
There are multiple alleles within the population meaning most individuals are heterozygous
59
MHC class I types
A, B, C
60
MHC class II tupes
DR, DP, DQ
61
EC50
Half of the maximum response
62
Effect of competitive antagonism on EC50
High EC50
63
Effect of non-competitive antagonism on EC50
EC50 the same | Maximum response reduced
64
Intrathecal route of administration
Into CSF
65
Epidural route of administration
Outside dura
66
How does hepatic elimination work?
Through bile
67
Drugs with zero order elimination
Aspirin, phenytoin, ethanol
68
Which phase of reactions is more affected by age?
Phase I reactions
69
Volume of distribution formula
Amount of drug in body / plasma concentration
70
Tachyphylaxis
Reduced drug effect on a short time scale
71
Glycopeptides
Gram positive cell walls
72
Beta lactams
Gram positive and negative but depends on the drug itself | Target cell wall synthesis
73
Aminoglycosides
Gram positive and negative | Target 30s ribosome
74
Tetracyclines
Gram positive and negative | Target 30s ribosome
75
Macrolides and linsosamines
Target 50s ribosome
76
Quinolones
Target DNA gyrase and topisomerase | Broad spectrum
77
Rifampicin
Targets RNA polymerase
78
Polymyxin
Targets bacterial cell wall
79
Mechanisms of antibiotic resistnace
``` Target modification Efflux pump Degrading enzyme Impermeability Resistance genes ```
80
Amantidine, rimantidine
Antivirals Inhibit M2 protein Prevent hydrogen ion influx Inhibit uncoating and coating of new virions
81
Ribavarin
Guanine analogue
82
Neuraminidase inhibitor
Prevents cleavage of sialic acids | Prevents release from membrane
83
Influenza specific adherance
Haemagluttinin | Sialic acid
84
E. coli specific adherance
Haemagluttinin | Mannose
85
S. aureus stealth mechanism
Binds antibody in wrong orientation
86
Functions of exotoxins
Facilitate pathogenic spread Lyse cells Block protein synthesis
87
Prokaryotes
Bacteria | Archaea
88
Eukaryotes
``` Fungi Protozoa Algae Helminths Arthropods ```
89
Gram positive cell wall
Thick peptidoglycan layer with no outer membrane
90
Gram negative cell wall
Thinner peptidoglycan layer with an outer membrane
91
Shapes of bacteria
``` Spherical = cocci Cylindrical = bacilli Spirals = spirochaetes ```
92
Groups of bacteria shapes
``` Ball = staphylo- Chain = strepto- Pair = diplo- ```
93
Catalase test
Divides gram positive cocci Staphylococci = catalase positive Streptococci = catalase negative
94
Staphylococci divisions
Coagulase positive = S. aureus | Coagulase negative
95
Streptococci divisions
Alpha, beta, non haemolytic
96
Cellulitis pathogen
Streptococcus pyogenes
97
Erysipelas pathogen
Group A strep
98
Scarlet fever pathogen
Group A strep
99
Impetigo pathogen
Staphylococci or streptococci
100
Enterobacteriaceae divisons
``` Lactose fermenters (pink) - E. coli Lactose non-fermenter (colourless) - pseudomons, salmonella ```
101
Glandular fever pathogen
EBV
102
Chicken pox pathogen
VZV
103
Nucleocapsid structure
Aggregations of capsomeres to produce the capsid | Capsid associated with viral nucleic acid
104
Diseases of the nucelus
Laminopathies Emery Dreifuss muscular dystrophy Hutchinson-Gilford progeria syndrome
105
RER function
Protein synthesis | Glycosylation
106
SER function
Synthesis of lipids and carbohydrates Storage of calcium Detoxification of drug toxins
107
Golgi function
Packaging of secretions | Proteins tagged for delivery
108
Tay Sachs disease
Lysosomal disease
109
Peroxisome functions
Metabolism of fatty acids Detoxification of free radicals and hydrogen peroxide Synthesis of plasmalogens
110
Actin microfilaments
Polymerise in cell-cell movement Maintain cell shape Organelle and vesicle transport
111
Intermediate filaments
Keratins in skin and hair Muscle desmin Provide tensile strength
112
Diseases of laminin (intermediate filament)
Epidermalysis bullosa
113
Microtubules
Cell scaffold Movement of organelles Mitotic spindle fibres Cilia and flagella
114
Macromolecules of the ECM
Proteoglycans | Fibrous proteins - collagen, elastin
115
Collagen in basement membrane
Type IV
116
Epithelial junction hierarchy
``` Tight - prevent passage of molecules Adherens - tether cells together Desmosome - resist mechanical stress Gap - allow passage of small molecules Hemidesmosome - anchor epithelium to basal lamina ```
117
Scalded skin syndrome
Caused by Staphylococcus | Bacterial proteases directed at desmosomal cadherins
118
Pemphigus vulgaris
Autoantibodies against desmosomal cadherins
119
Bardet-Biedl syndrome
Cilia disease
120
Primary vs secondary cilia
``` Primary = sensory antennae Secondary = motile ```
121
Microvilli
Formed by actin microfilaments
122
Flagella
Microtubule based
123
Catabolism vs anabolism
``` Catabolism = synthesis Anabolism = utilisation ```
124
G1 phase
Replication of cellular contents
125
S phase
Replication of chromosomes
126
G2 phase
Double checking for errors and making repairs
127
Prophase
DNA condensation Nucleoli disappear Nuclear envelope breaks down
128
Metaphase
Chromosomes line up along the centre | Microtubules attach at the kinetochore of the centromere
129
Anaphase
Pulling apart of chromosomes
130
Telophase
Uncoiling of chromosomes | Reformation of nuclear envelope
131
What normally holds sister chromatids together
Cohesin
132
Cytokinesis
Cytoplasmic division
133
When does crossing over occur in meiosis?
Prophase I
134
Which CDKIs block S phase entry?
p16, p21, p27
135
What does the retinoblastoma protein do?
Inhibits function of E2F proteins which control S phase entry, DNA synthesis and chromosome duplication
136
Which CDK inactivates Rb?
CDK2
137
1st cell cycle checkpoint
G1/S Checks the cell has enough energy, nutrients and size to be able to divide Checks for DNA damage before it is replication Can send cells into G0 - quiescence
138
2nd cell cycle checkpoint
G2/M | Can prevent cell division if DNA has been replicated incorrectly
139
3rd cell cycle checkpoint
Metaphase | Checks tension of spindle fibres to ensure they have attached properly
140
Anti-microtubule agents
Vinca alkaloids - prevent microtubule formation | Taxanes - prevent microtubule disassembly
141
Caspases
Initiators and executioners of apoptosis Initiator = 2,8,9 Executioner = 3,6,7
142
Apo vs holoenzyme
``` Apo = lacking cofactor - inactive Holo = with cofactor - active ```
143
Vitamin B1
TTP for PDC
144
Vitamin B2
Riboflavin for FAD
145
Vitamin B3
Niacin for NAD
146
Vitamin B5
Pantothenic acid for CoA
147
Lyase enzymes
Add atoms Remove atoms Form a double bond
148
Ligases
Use ATP to combine molecules
149
Vmax
Maximum activity of an enzyme that occurs when the enzyme is fully saturated
150
Km
Substrate concentration at which the reaction rate reaches half its maximal value
151
Which inhibitor is time dependant?
Irreversible inhibitor
152
Increased enzyme levels following myocardial infarction
Creatine kinase Lactate dehydrogenase Aspartate aminotransferase
153
What percent of the body's protein is collagen?
25%
154
Type 1 collagen
Loose and dense CT Fibrocartilage Bone Dentin
155
Type 2 collagen
Hyaline and elastic cartilage | Vitreous body of the eye
156
Type 3 collagen
Reticular fibres | Blood vessels
157
Type 4 collagen
Basement membranes
158
Osteogenesis imperfecta
``` Defect in type I collagen synthesis Fragile bones Thin sclera Thin skin Abnormal teeth ```
159
Marfan syndrome
``` Loss of stability given to elastin by fibrillin sheaths Tall stature Loose joints Floppy cardiac valves Eye problems ```
160
Cell adhesion molecules
Integrins Cadherins Selectins
161
Essential fatty acids
Alpha linolenic acid = omega 3 | Linoleic acid = omega 6
162
What do fatty acids male using COX enzymes
Prostaglandins, leukotrienes, thromboxanes
163
Cholesterol with glycerophospholipids
More gel like
164
Cholesterol with sphingolipids
More fluid
165
Cholesterol is a precursor for...
Bile salts Vitamin D Steroids Sex hormones
166
GLUT transporter on the enterocyte
GLUT2 - facilitated diffusion
167
Collagen amino acid seqence
Pro-Pro-Gly
168
How do chaperones work?
Bind to hydrophobic residues to prevent hydrophobic driven folding Create a unique environment for the protein Use ATP
169
D vs L form of sugars
D form = OH group on the right | L form = OH group on the left
170
Heparin
Actvivats a thrombin inhibiotr and factor X - antithrombin III Released from endothelial cells at sites of damage
171
Interleukin responsible for eosinophil recruitment
IL-5
172
Purines
A, G
173
Pyramidines
T, C
174
5' end
Free phosphate
175
3' end
Free OH
176
Linker histone
H1
177
Direction of DNA synthesis
5'-->3'
178
Topisomerase function
Prevents supercoiling of DNA
179
Why is there a low level of mistakes in DNA replication?
3' to 5' editing of DNA polymerase
180
Base excision repair
Back and backbone removed DNA polymerase replaces base Nick sealed by DNA ligase
181
Nucleotide excision repair
Nuclease cuts section of 12 nucleotides DNA helices removes it DNA polymerase fills gap DNA ligase seals nicks
182
DNA mismatch repair
``` MutS binds to error MutL finds nearest nick and drags it towards it to form a loop Strand removed DNA polymerase fills gap Sealed by ligase ```
183
Non-homologous end joining
Double strands simply joined back together | Without missing nucleotides
184
Homologous end joining
Homologous chromosome used to replicate missing sequence and ends joined together with missing copied nucleotides in between
185
Faulty nucleotide excision repair
Xeroderma pigmentosum | Leads to skin cancer, UV sensitivity
186
Faulty mismatch repair
MutS and MutL mutations | Leads to colon cancer
187
Faulty homologous recombination
BRCA2 | Leads to breast and ovarian cancer
188
DNA methylation process
Addition of methyl groups to cytosine nucleotides at CpG islands Done by DNA methyl transferase Makes genes harder to transcribe
189
Histone modifications
Affects how tightly packed chromatin is Histone acetylase increases transcription Histone deacetylase decreases transcription
190
X inactivation
Silencing of one of the X chromosomes of females
191
Nonsense mutation
Amino acid to stop codon
192
Missense mutation
One amino acid to another
193
Frameshift mutation
Disrupts the triplet code
194
Autosomal dominant conditions
Huntingdon's disease Marfan syndrome Neurofibromatosis Achondroplasia
195
Anticipation
Disease manifests at a younger age in successive generations
196
Autosomal recessive conditions
Cystic fibrosis Sickle cell anaemia Thalassaemias
197
X linked recessive conditions
Duchenne muscular dystrophy Haemophilia Colour blindness
198
X linked dominant conditions
Vitamin D resistant rickets
199
Number of genes
21000
200
Percentage of human genome that codes for proteins
1.5-1.6%
201
What does RNA pol 1 make?
rRNA
202
What does RNA pol 2 make?
mRNA
203
What does RNA pol 3 make?
tRNA
204
Uracil
Modified thymine Bonds to adenine Only in RNA
205
5' cap
Addition of a modified guanine to the 5' of the RNA
206
3' polyA tail
Addition of long chain of adenines to the 3' end of the RNA
207
Where does splicing occur?
Nucleus
208
Start code
AUG | Methionine
209
Stop codons
UAA UAG UGA
210
Process of checking correct amino acid is added to tRNA
Done by RNA poly3 | May need more than one step due to sizes of AAs
211
Ribosome sites
A site - entry P site - middle E site - exit
212
Internal ribosomal entry site
Not all translation starts from 5' cap
213
What happens when a stop codon is reached?
Release factors release peptide chain from final tRNA and the ribosome Second release factor then dismantles ribosome
214
Short vs long arm
``` Short = p Long = q ```
215
G light vs dark band
G light = gene rich, GC rich | G dark = gene poor, AT rich
216
On which chromosome are the MHC genes found?
6
217
Robertsonian translocation
Two chromosomes joined at their centromere
218
Trisomy 21
``` Down syndrome Hypotonia Distinct facial appearance Learning difficulties Heart malformations ```
219
Trisomy 18
Edwards syndrome Multiple malformations Clenched hands with overlapping fingers
220
Trisomy 13
Patau syndrome | Malformations particularly affecting midline structures
221
Klinefelter syndrome
``` 47,XXY Infertility Poorly developed 2ndy sexual characteristics Female shaped hips Tall ```
222
Turner syndrome
45,XO Short stature Primary amenorrhoea Congenital heart disease
223
Amniocentesis
15-18 weeks | Sample of amniotic fluid
224
Chorionic villus sampling
12-14 weeks | Placenta tested
225
Nuchal scan
11-14 weeks For Down's syndrome Non-invasive
226
pH of ECF
7.35-7.45
227
Sources of acid
Aerobic respiration --> carbonic acid Anaerobic respiration --> lactic acid Incomplete fatty acid oxidation --> ketoacids Hydrolysis of nucleic acid --> phosphoric acid
228
Phosphate buffer system
Minot relevance in ECF | Important in kidneys
229
Haemoglobin buffer system
HB + H+ --> HHb Loads in tissues Releases at lungs
230
Major blood buffers
Bicarbonate | Haemoglobin
231
Renal compensation
Can excrete or conserve bicarbonate or hydrogen ions
232
Respiratory acidosis
``` Low pH, high CO2, high bicarb Hypoventilation COPD Respiratory centre depression Sepsis ```
233
Respiratory alkalosis
``` High pH, low CO2, low bicarb Hyperventilation Stress Elevated body temperature Overventilation ```
234
Metabolic acidosis
Low pH, low bicarb, low CO2 Increased acid production or retention - renal failure, starvation, lactic acidosis, diabetes Bicarbonate loss - chronic diarrhoea
235
Metabolic alkalosis
High pH, high bicarb, high CO2 Increased bicarb - carbohydrate retention Loss of organic acids - repeated vomiting
236
Anion gap
Difference between cations and anions Normal = GI bicarb loss, renal loss High = lactic acidosis, ketoacidosis, renal failure
237
Gibbs-Donnan effect
Presence of a charged impermeable ion on one side of the membrane
238
Voltage gated sodium channel
Activation gate - opens in depolarisation fast | Inactivation gate - closes in depolarisation slowly
239
Voltage gated potassium channel
Opens in response to depolarisation Opens slowly Dont inactivate Produce hyperpolaristion
240
Stages of AP
1. Resting - Na and K channels closed 2. Na channel opens 3. K channels open, Na channels starting to close 4. Hyperpolarisation - K channels open, Na closed
241
Absolute refractive period
Cannot open regardless of applied stimulus During depolarisation 1-2ms
242
Relative refractive period
Larger stimulus required to produce action potential While membrane is hyperpolarised 3-15ms
243
Effect of diameter on conduction velocity
Cytoplasmic resistance decreases with increased diameter | Faster conduction
244
Effect of myelination on conduction velocity
Membrane resistance increases with insulation | Faster conduction
245
Temporal summation
APs occur in rapid succession and combine to reach threshold
246
Spatial summation
Multiple APs from different synapses
247
Meissner corpusle
Light touch
248
Merkel cells
Pressure | Texture
249
Pacinian corpulscle
Vibration
250
Ruffini endings
Skin stretching
251
Origins of sympathetic nerves
T1-L2
252
Myenteric ENS plexus
Between circular and longitudinal muscle layers | Controls motility
253
Submucosal ENS plexus
Between submucosa and circular muscle | Controls secretion and muscularis mucosae motility
254
Sacral parasympathetic nerve roots
S2-4
255
Sympathetic nerves with paravertebral ganglia
T1-4
256
Sympathetic nerves with prevertebral ganglia
T5-L2
257
Total body water
60% body weight | 42L
258
Extracellular colume
1/3 TBW | 14L
259
Intracellular volume
2/3 TBW | 28L
260
Interstitial fluid volume
10.5L
261
Plasma volume
3.5L
262
Red blood cell volume
1.5L
263
Cells other than RBC volume
26.5L
264
Transcellular fluid
1L CSF Synovial fluid
265
What does tonicity depend on?
Solutes that cannot cross the membrane freely
266
Obligatory water loss
500ml/day