Gene Therapy 1 Flashcards

(55 cards)

1
Q

What is the aim of gene therapy?

A

Deliver a GENE to overcome or treat diseases (genetic or acquired)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Name the current genetic therapy targets

A

1) Cancer
2) Monogenic disease
3) Infectious disease
4) CVD

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

What can be delivered to block the expression of a faulty gene?

A

A different gene that produces a product blocking the faulty gene’s expression, resulting in normal cell function for cancer.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What is a suicide gene?

A

A gene that, when delivered to a cell, results in the production of a toxic chemical that kills the cell.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What happens after an enzyme is delivered and expressed in a targeted cell?

A

A substrate for that enzyme is delivered, which is converted into a toxic compound that kills the targeted cells.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What is the effect of the toxic compound produced by the targeted cells?

A

It will kill only the cells that are being targeted.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What is gene replacement used for?

A

Gene replacement is used for genetic disorders such as cystic fibrosis (CF) and sickle cell disease.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What are suicide genes?

A

Suicide genes encode enzymes that activate a toxic drug.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What is an example of a suicide gene therapy?

A

An example is HSV-TK combined with ganciclovir.

This is also known as gene-directed enzyme prodrug therapy (GDEPT).

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What is the efficiency of HSV-TK compared to mammalian kinases?

A

HSV-TK has greater than 1,000-fold efficiency in phosphorylating ganciclovir than mammalian kinases.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

How are suicide genes delivered into tumor cells?

A

Suicide genes are incorporated into a non-mammalian enzyme to deliver it into tumor cells.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What is required for the effectiveness of suicide gene therapy?

A

The tumor cells must express the gene and produce the product.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What happens to dsDNA in nucleic acid based therapy?

A

It is chopped up into small pieces of between 21-25 base pairs in length, forming siRNA.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What occurs if viral mRNA is found in nucleic acid based therapy?

A

The siRNA will be unwound into ssRNA and will bind to the complementary region within the mRNA.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What is formed during the nucleic acid based therapy process?

A

RNA induced silencing complexes are formed, which cleave the RNA into two and stop translation of the protein.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What is the effect of nucleic acid based therapy on viral proteins?

A

It stops viral proteins from being translated.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

Can nucleic acid based therapy be used to knock down our own proteins?

A

Yes, it can be used to knock down our own proteins.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

How can siRNAs be designed in nucleic acid based therapy?

A

They can be designed to be complementary to a region of the protein’s mRNA.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

What is an example of a protein involved in a disease state that can be targeted?

A

VEGF protein or receptor can be targeted.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

What is the outcome of delivering designed siRNA to cells?

A

It interferes with the mRNA, causes its cleavage, and reduces the expression of the gene ultimately at the protein level.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

What is miRNA and how is it related to nucleic acid based therapy?

A

miRNA is derived from specific genes and codes for specific RNAs, causing destabilization and reduction of translation into protein.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

Name 2 main delivery routes

A

Viral vectors
Non-viral vectors

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

Name the challenges to delivery of genetic material

A

Very large
Hard to get across some membranes particularly easy
Unstable in serum - chemically modify them to make them more stable
Sometimes can mature into lysosomes which can degrade once in the cytoplasm
Difficulties crossing the nuclear membrane
Can be degraded once in the cytoplasm

24
Q

Name three viral vectors

A

Retroviruses
Adenoviruses
Adeno-associated virus (AAV)

25
What can be done if a miRNA has low expression in cancer?
You can deliver that miRNA to cells to reverse this low level expression.
26
What should be done if there is high expression of miRNA?
You can deliver an anti-miRNA that’s complementary to it, which interferes with its action and stops it having a negative effect.
27
What is siRNA?
siRNA: knocks down gene expression.
28
What is miRNA?
miRNA: regulates gene expression, involved in cancer.
29
What is the purpose of decoy oligonucleotides?
Decoy oligonucleotides reduce the expression of a gene producing a disease-causing protein by interfering with transcription.
30
Where do decoy oligonucleotides often bind?
They often bind to the promoter region of the gene.
31
What is an alternative method to reduce protein expression?
Delivering oligonucleotides that block translation of the mRNA for a particular protein.
32
How do oligonucleotides block translation?
They bind and are complementary to a specific sequence in the mRNA, stopping translation into a disease-causing protein.
33
What is direct delivery in gene therapy?
Direct delivery involves putting a therapeutic gene into a plasmid, naked gene, or oligonucleotide, and injecting it into the patient for delivery to target tissue. ## Footnote This can also be done using a cell-based in vivo approach.
34
What is cell-based delivery in gene therapy?
Cell-based delivery involves modifying the patient's own cells in vitro and then reintroducing them into the patient. ## Footnote Genes must be delivered into the cells before they can be modified.
35
What diseases can be treated using these gene therapy methods?
Diseases of the haematopoietic system, such as sickle cell anaemia and beta-thalassaemia, can potentially be cured by modifying a patient's haematopoietic stem cells and reintroducing them.
36
What is the first step in the life cycle of HIV?
HIV binds to the cell and inserts its genome into the cell.
37
How does the HIV genome reach the nucleus?
The genome hitches a lift on the cytoskeleton straight to the nucleus.
38
What happens to the viral genome once it reaches the nucleus?
The viral genome is inserted randomly into our genome and sits there dormant.
39
What is the next step after the viral genome is inserted into the host genome?
It is transcribed into the viral genome or vRNA.
40
What happens to the vRNA after it is transcribed?
The vRNA is assembled into the proteins of the virus.
41
What occurs after the viral proteins are assembled?
The viral genome is packaged into the proteins, and the life cycle repeats.
42
What is unique about the lentivirus when delivering a gene?
There is no replication; the viral machinery is used to deliver the cargo into the genome.
43
What protein does the virus produce to block p53?
The virus produces a protein called E1B which blocks p53.
44
What effect does E1B have on the cell?
E1B stops the cell from dying, allowing it to proliferate inside the living cell.
45
What happens if the virus is engineered to lack E1B?
If the virus does not have E1B, it cannot prevent cell death and will not proliferate.
46
What occurs when the modified virus is delivered to healthy cells?
In healthy cells, p53 will be induced and it will lead to cell death.
47
Can viral replication occur in p53 deficient cells?
No, viral replication cannot occur in p53 deficient cells.
48
What happens to tumors with reduced expression of p53?
In tumors with reduced expression of p53, the modified virus can kill the cells.
49
What is the outcome for p53 deficient tumor cells when exposed to the modified virus?
In p53 deficient tumor cells, the modified virus will proliferate and kill those cells.
50
What are the key advantages of non-viral vectors?
Safer, tunable, high capacity
51
What are the key disadvantages of non-viral vectors?
Poor efficiency, transient expression, toxicity (e.g. from cationic charge)
52
What are lipoplexes?
DNA + cationic lipid complexes
53
What are dendrimers?
Highly branched, functionalised nanoparticles
54
What are CPPs?
Short peptides (e.g. TAT) that ferry genetic material into cells
55
What is the function of KRAS-targeted decoy oligonucleotides?
Inhibit transcription factor MAZ in pancreatic cancer.