Gluconeogenesis Flashcards

1
Q

What would be the benefit of synthesising glucose by the body

A

Highly energy rich molecule which is utilised by the body as a metabolic fuel
Different monosaccharides can be converted into glucose

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2
Q

What process occurs when you aren’t taking in glucose in your diet and glycogen stores are depleted

A

Gluconeogenesis
Using non-carbohydrate precursors

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3
Q

Where does gluconeogenesis occur

A

Liver and Kidney

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4
Q

Gluconeogenic precurosrs are molecules that can be used to produce a new synthesis of glucose
These can include?

A

Glycolysis intermediates
TCA cycle intermediates
carbon skeleton of amino acids

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5
Q

Where molecule does glycerol come from

A

Released in the hydrolysis of triacylglycerols

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6
Q

How can glycerol be converted into glucose

A
  • It can be phsphorylated to glycerol phosphate using glycerol kinase
  • It then is oxidised to dihydroxyacetone phosphate using glycerol phosphate dehydrogenase
  • This can then be converted into glyceraldehyde 3-P using triose phosphate
  • Reverse glycolysis then to form glucose
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7
Q

What is ‘the Cori Cycle’

A
  • Converting Lactate to glucose
  • Lactate produced by anerobically respiring mucles is transferred to the liver, converted to pyruvate (by lactate dehydrogenase)
  • Pyruvate then to glucose using reverse glycolysis
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8
Q

Amino acids cannot be stored in the cell as subunits
Hence how can amino acids be converted into glucose
(hint glucose alanine cycle)

A
  • Alanine can move from muscle to liver
  • Where it is transanimated back to pyruvate
  • Pyruvate to glucose through reverse glycolysis
  • Transports nitrogen from muscles to liver where it is used for urea biosynthesis
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9
Q

What is an α-ketoacid

A

An amino acid which has had its R-group removed

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10
Q

Apart from Alanine, how can other amino acids be metabolised

A
  • α-ketoacids formed from glucogenic amino acids
  • Enter the TCA cycle and forming oxaloacetate
  • (others can form acetyl CoA in an irreversible reaction but not used to make glucose)
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11
Q

There are 3 reactions within glycolysis which are irreversible (high -ΔG) values
How it this combated in gluconeogenesis

A

Overcome by 4 gluconeogenic enzymes

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12
Q

The reaction forming pyruvate from phosphophenolpyruvate is irriversible
How it this overcome

A
  • Two enzymes pyruvate carboxylase and PEPCK are used
  • Pyruvate carboxylase needs a Co-enzyme in the form of biotin bound to a lysine residue, which forms a flexible arm
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13
Q

Where do we consider the start of gluconeogenesis to occur

A

In the mitocondria

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14
Q

How does pyruvate carboxylate operate to form oxaloacetate from pyruvate
Knowing the process of the TCA cycle, what compound could encorage this process

A

Pyruvate carboxylate will bind to carbon dioxide, and utilising a phosphate group from ATP
This CO₂ molecule is added onto pyruvate
Lots of Actyl CoA could encourage this process

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15
Q

Once oxaloacetate is formed using pyruvate carboxylate, what happens next

A
  • PEPCK catalyses the next reaction
  • Catalyses the decarboxylation and phosphorlation (using GTP) of oxaloacetate
  • This will form phosphoenolpyruvate
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16
Q

As said before these gluconeogensis reactions occur in the mitocondria
Oxaloacetate must be transported from the mitocondria to the cytosol where PEPCK is
How does this occur

A
  • Malate-Asparate Shuttle
  • Route 2: Malate dehydrogenase (along with NADH) will convert oxaloacetate to Malate. This can be transferred across the membrane into the cytosol. Here it is re-oxidised to oxaloacetate using the same enzyme and NAD⁺
  • This route is preferred due to NADH being formed in the cytosol which is needed for gluconeogenesis
17
Q

From phosphenolpyruvate to fructose-1,6-bisphosphate, the glycolysis reactions (5) work in reverse
From fructose-1,6-bisphosphate to Fructose-6-phosphate, this reaction is irreversible
How is this overcome

A
  • Fructose-1,6-phosphate is hydrolysed by fructose bis-phosphatase using water
  • This forms Fructose-6-phosphate
  • Releases inorganic Pi
  • Key regulatory step, halted with large amout of AMP AND high levels of glucagon
18
Q

Fructose-6-phosphate is converted into glucose-6-phosphate through a revesible reaction
From glucose-6-phosphate to glucose, the reaction is irreversible
How is this overcome

A
  • Glucose-6-phosphatase (only present in liver and kidney)
  • Forms glucose in a hydrolysis reaction using water
  • Releases an inorganic Pi
19
Q

What is the name of a diease where glucose-6-phosphatase is deficient which can cause hypoglycemia

A

Type 1a glycogen storage disease

20
Q

What is the energy cost of forming glucose

A

6 ATP
2 NADH

21
Q

What are 3 ways gluconeogenesis can be regulated

A
  • Glucogenic substrates
  • Enzyme synthesis
  • Glucagon
22
Q

Describe the structure of glycogen

A

A polymer of A-glucose (1,4 glycosidic bonds)
with a highly branched structure (1,6 glycosidic bonds)

23
Q

Where are the main stores of glycogen found

A

In skeletal muscles and liver

24
Q

What is the benefit of storing glucose as glycogen in a cell

A

Reduces the osmotic pressure on the cell

25
Q

What does glycogen have to aid in its breakdown

A

It will have a non-reducing end on every branch
The enzymes which break down glycogen, all work on the non-reducing end

26
Q

Glycogen degradation is not a reversal of synthetic reactions. Separate cytosolic enzymes are required
What are they

A
  • Glycogen phosphorylase
  • Glycogen debranching enzyme
  • Phosphoglucomutase
27
Q

How does glycogen phosphorylase work

A
  • Cleaver the α(1,4) bond forming glucose-1-phosphate
  • This is done on the non-reducing end
28
Q

On glycogen phosphorylase, there is a large gap between the binding site for glycogen and catalytic site
What effect will this have

A

A limit dextrin
Means there is a number of glycogen molecule that won’t be hydrolysed by the enzyme
About 5 glycogen subunit that won’t be broke down when adjacent to a branch

29
Q

How can the enzyme activity of glycogen phosphorylase be altered

A

Allosteric interaction and covalent modification
Inhibitors: ATP, G6P, glucose

30
Q

What enzyme is used to combat the issue of the limit dextrin strand

A

Glycogen debranching enzyme
Acts as a α(1,4) transglycosylase: moves trisaccharide units to non-reducing branch end
AND removes the one remaining glycogen reside at the branch point to create free-glucose

31
Q

What is the use of phosphoglucomutase in glycogen breakdown

A

Converts glucose-1-phosphate into glucose-6-phosphate
This can the continue along the glycolytic pathway and hydrolysed to glucose/ or other metabolic reactions

32
Q

Starting with glucose-6-phosphate, how would you form glycogen

A
  • Start off by forming glucose-1-phosphate in an isomerisation reaction using phosphoglucomutase
  • It is activated by adding a phosphate group to form UDP-glucose using UDP-glucose pyrophosphorylase
  • Glycogenin places around 7 UDP-glycose molecules on itself which allows glycogen synthase to add UDP-glucose onto the non-reducing end of glycogen
33
Q

How are branches formed on glycogen

A
  • Using a branching enzyme (4,6 transferase)
  • It takes a section of the main chain and remove it, and create an α(1,6) bond
34
Q

When does glycogen synthesis occur

A

Accekerates after a meal - well fed state