Hep C intro and epid. Flashcards

(34 cards)

1
Q

Define hepatitits

A

Inflammation of liver

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2
Q

Is HCV enveloped?

A

Yes

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3
Q

What is the transmission method of HCV?

A

Parenteral

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4
Q

Does HCV cause acute or chronic hepatitis?

A

Chronic

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5
Q

Why isn’t HCV transmission enteric?

A

Gut bile would break down envelope

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6
Q

What enzyme is released during liver damager?

A

Alanine aminotransferase (ALT)

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7
Q

What diseases can HCV develop into?

A

Chornic liver diseases, like firbosis and cirrhosis
Hepatocellular carcinoma

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8
Q

What is cirrhosis

A

Cirrhosis is a chronic liver disease that occurs when scar tissue replaces healthy liver tissue

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9
Q

Is there a HCV vaccine?

A

No

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10
Q

Is the nucleotide sequence of HCV variable?

A

Vary.

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11
Q

How many genotypes of HCV

A

8 genotypes

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12
Q

What HCV genotypes are commenest in W. Europe?

A

1-3

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13
Q

Most common genotype of HCV in Egypt? And why?

A

Genotype 4
Due to schistomsomiasis campaign

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14
Q

How is HCV diagnosed?

A

HCV Ab, can take many months to be +ve
qRT-PCR –> determine genotype

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15
Q

What was HCV first termed?

A

Non-A, non-B hepatitis. NANBH

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16
Q

What chemical agent proved that HCV was small and eveloped?

A

Filterable and inactivated by chloroform

17
Q

How is HCV genome cloned?

A

High titre human serum is centrifuged
Extract RNA
RT to form cDNA
Clone into lambda phage
Infect E,coli with lambda phage library
Take imprint of plate using nitrocellulose membrane
Prove membrane w/ antiserum from NANBH patients
Return to original plate and pick plaques and sequence

18
Q

How many seperate proteins is the HCV genome cleaved into?

A

10 seperate proteins

19
Q

What family is HCV part of?

20
Q

IS HCV genome linear or circular?

21
Q

What nucleic acid is the HCV genome?

A

Positive sense single stranded RNA

22
Q

What are the structural HCV genes?

A

Core,
E1 and E2 - envelope glycoproteins
(p7)

23
Q

What are the non-structural HCV genes?

A

NS2
NS3 + NS4A –> protease/helicase
NS4B
NS5A
NS5B - RdRp

24
Q

What 5’ and 3’ structures does the orthoflavivirus genus have?

A

m7G cap and poly(A) tail

25
Example of orthoflaviviruses
Dengue West Nile Yellow Fever Zika
26
What genus is HCV a part of?
Hepacivirus
27
What animal and what organ system was Equine hepacivirus girst isolated from?
Dog, respiratory system
28
In what structure is HCV studied?
Sub-genomic replicons and cell culture infectious systems
29
What genes are SGRs missing to study HCV
Core, E1, E2, p7
30
Issue with infectious clones of HCV?
RNA derived from infectious clones didn't replicate in cultured cells
31
What genes replace the removed genes in pHCV SGRs
NPT and EMCV IRES
32
What cell are transfected with pSGR-HCV ?
Huh7
33
What are Huh7 cells?
Human hepatoma cell line
34
Issues with SGR-HCV
Only work in Huh7 cells Subsequent replicons with full length genome don't produce virus Only study part of lifecycle