L17 Flashcards

1
Q

What is the scientific name for mouse

A

Mus musculus

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2
Q

What is the scientific name for clawed frog

A

Xenopus sp.

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3
Q

What is the scientific name for zebrafish

A

Danio rerio

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4
Q

What is the scientific name for fruit fly

A

Drosophila melanogaster

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5
Q

What is the scientific name for nematode worm

A

Caenorhabditis elegans

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6
Q

How much of our genes do we share with mice

A

95%

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7
Q

Why is the fact that mice have a short lifecycle useful?

A

rapid breeding of new strains

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8
Q

What’re the cons re: mice?

A

relative expensive to keep

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9
Q

When is animal research carried out in the UK

A

if there is no feasible alternative

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10
Q

What are the three licenses required for animal experiments?

A

‒ Personal license for the researcher
‒ Project license for the study
‒ Establishment licence for the place where the study is carried out

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11
Q

What percent of animal research carried out in the UK uses mice, rats, fish and birds

A

97%

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12
Q

What is the issue with in vitro models?

A

Informative studies but not representative of a protein’s role in a biological system like a body - interactions btwn diff. cell types are impossible to model outside of animals

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13
Q

What are the three mouse models used to study human development and disease

A

transgenic, knock out and knock in mice

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14
Q

What do all of the approaches (transgenic, knock out and knock in mice) require

A

vector construct

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15
Q

What differs between the different technique (transgenic, knock out and knock in mice)

A

level of complexity differs between each technique And whether it is targeted to a specific part of the mouse genome or not

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16
Q

What are the steps in standard transgenic approach

A

DNA (gene of interest) is microinjected into
the pro-nucleus of a fertilized mouse oocyte

Injected oocytes are transferred to a pseudo-
pregnant recipient mouse

ALL offspring are screened for expression of
the transgene by DNA analysis

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17
Q

What are the steps in gene-targeted transgenic approach

A

A isogenic transgene with a drug selection gene is
introduced into embryonic stem (ES) cells

Drug selection is used and surviving cells are
screened for the correct integration of transgene

Correctly targeted cells are micro-injected in
mouse blastocysts

Blastocysts are transferred to pseudo-pregnant
recipient mouse

Chimaeric offspring are identified and mated
to test for germline transmission of transgene

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18
Q

What is the difference between standard transgenic approach vs gene targeted transgenic approach

A

In transgenic approach =
DNA micorinjected into the pro-nucleaus

IN gene-targeted transgenic approach
A isogenic transgene with a drug selection gene is
introduced into embryonic stem (ES) cells

19
Q

What does transgenic approach require?

A

Requires simple vector construct

20
Q

What does the simple vector construct contain

A

gene of interest
relevant promoter
3’ protein tag for detection
poly A tail

21
Q

What are the strengths of using transgenic mouse models?

A

Cheap & relatively easy to make
Multiple founders are generated

22
Q

What are the weaknesses of using transgenic mouse models?

A

Need to characterise numerous mouse lines
Can not control site of integration into genome
(number of copies & variable expression levels
off target effects)
Wild type gene product is still present
(may interfere & influence phenotype
can express (tagged) human genes in mice

23
Q

Is gene targeting approach for knock out mice more precise?

A

Yes, requires a complex vector and relies on
homologous recombination between vector and host genome

24
Q

What is gene trapping

A

Gene trapping is a high-throughput approach that is used to introduce insertion
mutations across the genome in mouse embryonic stem cells

25
How is a gene trap vector inserted?
disrupts gene function reports gene expression provides a convenient tag for the identification of the insertion site
26
What does the IGTC do?
IGTC administers all publicly available gene trap cell lines Researchers can search and browse the IGTC database for cell lines of interest
27
Typical ‘Genetrap’ from International Mouse Phenotyping Consortium To provide targeted inactivation through recombination using ___ and ___
FRT and loxP
28
How do FRT and loxP sites mediate site-specific recombination
DNA recognition sites
29
What is Cre recombinase?
tyrosine recombinase enzyme derived from the P1 Bacteriophage and catalyses site-specific recombination between two LoxP sites
30
What is flippase?
tyrosine recombinase enzyme derived from the the baker's yeast - Saccharomyces cerevisiae - and catalyses site-specific recombination between two FRT sites
31
What do loxP allow ?
Strait forward knock outs
32
What do FRT and loxP allow ?
conditional knock outs
33
Describe the cre-lox system for conditional alleles
1. Following manipulation the mouse has a targeted but “floxed allele”. 2. A second mouse is transgenic for cre recombinase expressed under the control of a tissue specific promoter. 3. The two mice a crossed together to generate a mouse line that carries both alleles: “floxed” and “cre”. 4. Result is the tissue specific deletion of the “floxed allele” ONLY in tissues where cre recombinase is expressed. 5. Can also have inducible cre expression.
34
What provides genetraps for all genes?
èInternational Mouse Phenotyping Consortium
35
How can we make conditional KO?
Using cre recombinase
36
What is the con of using a mouse?
May not accurately model a known human disease
37
What is knock-in technology used for
introduce a human mutation into the mouse genome
38
What has changed the approached use for knock-in models?
crispr/cas9
39
Why would the remaining loxp side by a problem?
might interfere with mRNA stability and/or expression
40
List an example of disease modelling using a variety of mouse transgenics
genetic skeletal diseases - the cartilage growth plate of a long bone
41
What bone diseases have mouse models for human genetic using 'knock-in' mouse
Targeted mouse models of genetic skeletal diseases Mouse model of a genetic skeletal disease And ER stress
42
give examples of Generation of transgenic ‘phenocpies’ to provide proof of concept for understanding disease mechanisms
Transgenic ‘phenocopy’ using Col2-TgRdw Col2-TgRdw targeting, expression and retention in cartilage Col2-Tg Rdw mice have severe short-limb dwarfism. . . .
43