lec 6- cytoskeleton: actin 3 Flashcards

(40 cards)

1
Q

what is the only inhibitor of the Arp 2/3 complex?

A

Arpin

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2
Q

what is Arpin? where does it localize? what activates it?

A

-a protein encoded by a single gene
-localizes to lamellipodia
-is activated by Rac

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3
Q

how was Arpin discovered?

A

-the acidic “A” domain of WAVE is the part that binds to the Arp 2/3 complex, in WAVE there is a specific Tryptophan in the 3rd from the last position of the Acidic domain
-they use biomechanics to look for another protein that had the exact same A domain and found an uncharacterized protein

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4
Q

if Arpin has the same A domain, why does it not activate Arp 2/3 complex?

A

-because it lacks the V and C homology domains which are needed to activate the Arp 2/3 complex

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5
Q

when Arpin is present or blocked, what happens to the Arp 2/3 complex?

A

present: inhibits Arp 2/3 complex, directional changes
blocked: very active Arp 2/3 complex and straighter movements

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6
Q

does Arpin influence chemotaxis (whole cell migration)?

A

no, cells with Arpin knocked out still move the same speed and distance as cells containing arpin

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7
Q

what is the structure of actin within lamellipodia? what is it capped by? how does it move?

A

-it elongates 50-500 subunits/sec
-pushes against the plasma membrane
-filaments are capped by capping protein at 1 micron in length
-moves in waves backward, called retrograde flow

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8
Q

what disassembles the filaments once at the back of the lamellipodium?

A

cofilin

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9
Q

what are the steps of actin polymerization at the lamellipodia?

A
  1. pool of ATP-actin bound to profilin in the cell
  2. signals activate WASp/Scar proteins
  3. WASp/Scar activates Arp 2/3 complex to initiate new filaments as branches on old filaments
  4. elongation
  5. growing filaments push membrane forward, wiggling allows for more monomers to squeeze in
  6. capping protein terminates elongation
  7. ATP hydrolyses and Pi dissociates
  8. ADF/cofilin severs and depolymerizes ADP-actin filaments
  9. LIM-kinase inhibits ADF/cofilin
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10
Q

do cells need the main body to move, or can they move with just the lamellipodia?

A

they only need the lamellipodia

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11
Q

what are filopodia? what are they thought to do?

A

-actin rich structures alongside microspikes that are in the lamellipodia
-membrane projections
-thought to be used to sample the cellular environment and direct the cells movement by guiding the lamellum, guide cell motility

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12
Q

how is the actin arranged in filopodia?

A

-the actin is arranged in parallel arrays and is highly crosslinked

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13
Q

what causes crosslinks?

A

actin binding proteins

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14
Q

what does filopodia start out as?

A

-microspikes in the lamellipodia, that eventually emerge out of the membrane to become filopodia

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15
Q

what are microvilli?

A

-finger like projections of membrane used to increase surface ares by 20x for absorption

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16
Q

what is the structure of microvilli? where are the barbed ends?

A

-each is 0.08-2 microns wide
-actin dense core of 20-40 parallel and cross linked actin filaments
-barbed ends are up towards the cell periphery
actin intermingles with the cortical actin

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17
Q

what are the 5 actin bundling proteins?

A

-Fascin
-Fimbrin/Plastin-1
-Espin
-Villin
-alpha-actinin

18
Q

how many isoforms of fascin?

A

-3 isoforms (fascin 1, 2, and 3)

19
Q

where is fascin found?

A

at parallel actin-rich structures at the cell periphery (microspikes, filopodia)

20
Q

how is fascin controlled?

A

through phosphorylation by protein kinase C (PKC)

21
Q

what happens when fascin is phosphorylated by PKC?

A

you get a loss of actin bundling

22
Q

are KO mice fine when fascin is phosphorylated?

A

yes, only minor defects

22
Q

how is the loss of actin bundling caused by phosphorylation of fascin reversed?

A

by the Rac G-protein that acts on the Fascin-PKC complex

23
Q

who discovered fimbrin?

A

Anthony Bretscher

24
how many types of fimbrin are there and how many binding sites does it have?
-3 types: I (intestinal) L (leukocyte) and T (tissues) -2 actin-binding sites
25
what does fimbrin do?
-it is the protein responsible for the peracrystalline array of actin filaments within the core of microvilli -completely fills-up the actin core of microvilli
26
how was Espin discovered? who discovered it?
-when antibodies were accidentally generated from isolated spermatids -the ectoplasmic specializations (Espins) remained attached to the spermatids -James Bartles
27
how many espin are there for each 20 actin monomers I the filaments?
1 espin for 20 actin monomers
28
what does Espin do? how many genes and starting sites?
-bundles actin into parallel arrangements -elongates the actin in actin-rich structures -binds to profilin -1 gene -4 starting sites with spliced variants
29
what are the espin found?
-in the testis, microvilli, stereocilia, taste, receptor cells and more
30
there is a single gene for espin, but how many isoforms does it have?
-2 types: Large espin (L-espin) and small espin (s-espin)
31
what is the structure of espin?
-has a WH2 domains, where actin binds
32
what is villin? what does it do?
-a member of the gelsonin family -can bundle or cap by binding to the barbed ends of actin filaments -sever or nucleate actin filaments
33
how many binding sites does villin have?
-3 actin binding sites -2 are calcium dependent while the third is in the C-terminal "headpiece" of the protein
34
what differentiates villin from gelsonin?
the headpiece
35
if you transfect in villin to cells, what happens?
cells gain microvilli, but loose stress fibers
36
what happens to KO animals when villin is knocked out?
normal microvilli by compensation from other members of the villin family
37
is villin associated with microvilli in plants?
no
38
what is a-actinin?
a member of the spectrin superfamily
39
what are the characteristics of a-actinin? what does it form?
-4 different genes -make 6 proteins all with different tissue distributions -forms antiparallel rod shaped dimers with 1 actin-biding region at each head -spectrin repeats within the tails that are used against molecular mechanical strain -has a calmodulin domain at the tails that can bind calcium -grouped into muscle isoforms (calcium insensitive) and non-muscle isoforms (calcium sensitive)