Flashcards in Lecture 10 -Transgenic plants and animals and how to make them Deck (26):
What is genetic modification?>
the selective and purposeful alteration of genes by humans including methods of incorperating new genes or traits into anorganism through genetic engineering
What is genetic engineering?
introduction of 'foreign' DNA by transformation
Outline the traditional breeding strategy
1)Cross an elite line with another line of an organism showing the desired trait
2)Resulting F1 hybrid contains organism heterozygous for the desired trait
3)Identify phenotypic expression of desired trait in F2
4)Backcross F2 desired trait to elite line
Outline transgenic strategy
1)use gene transfer methods to incorperate a desired trait from foreign agents
2)results in only desired trait being incorperated
What factors significantly contribute to the yield gap in crop improvement?
Abiotic - drought, cold, heavy metals, salt
Biotic - plant pathogens, insects, weeds
Political - conflict, infgrastructure diseases education
What are the aims of crop improvement?
-increase nutritional benefit
-use 'marginal' land
-avoid post harvest stresses
-reduce chemical lost
-increase economic gain
-increase food security
-avoid environmental harm
What are the requirements of making a transgenic plant?
-DNA construct to express gene of interest
-method of DNA delivery into plant tissue e.g. agrobacterium mediated, particle bombardment
-method to regenerate whole plants carrying gene of interest
What must the promotor in front of a gene of interest contain?
regulatory elements to allow transcription in plants
What must the gene of interest contain for creation transgenic plant?
-an open reading frame (codons may have to be optimised for expression in plants)
What must the terminator contain for creation of a transgenic plant?
How can gene expression be supressed in plants?
using RNA interference (RNAi)
What are the features of RNA interference?
-target squence must be inverted repeat
-transcribed RNA is self complimentary and can form dsDNA
-dsRNA is trigger of the RNA interference pathway
-RNA interference can be used for targeted supression of gene expression
What is the mechanism of RNA interference?
1)dsRNA or shRNA cut by a dicer to expose P groups on 3' ends of DNA forming a siRNA duplex
2)Argo enzyme leads to single stranded RNA and formation of the RISC complex
3) RISC binds to mRNA forming a siRNA/mRNA complex which splices mRNA, silencing it
What is Agrobacterium tumefaciens?
-bacteria induces crown gall disease in plants
-bacteria live within the gall, which is a tumour like proliferating mass of undifferentiated plant cells
What do plant cells produce that are used by Agrobacterium tumefaciens and how?>
1) opines used by A.bacterium as carbon and nitrogen source
2) Hormones to enable cell proliferation
What is the Ti plasmid?
A tumour inducing plasmid found in A.bacterium
What is T-DNA?
Segment of the Ti plasmid integrated into host plants genome
What are some features of the Ti plasmid?
-contains T-DNA (tumour production and Nopaline synthesis) vir genes, nopaline utilisation and an ORI for replication in agrobacterium
What do wounded plants release and what does this lead to?
release phenolic compounds e.g. acetosyringone
-attract Agrobacterium to wound site
-involved in the induction of Ti vir genes
What are vir genes responsible for?
act upon T-DNA to transfer of genomic DNA within cell nucleus
What is the structure of the TDNA?
-has left boarder and right boarder with genomic DNA between (only right boarder necessary)
-DNA contains a selectable marker e.g. for antibiotic or herbicide resistance
-Gene of interest
What is the purpose of the selectable marker?
allow for selection of plant cells that have recieved TDNA
What is needed for binary vector system for Agrobacterium mediated plant transformation?
Disarmed Ti plasmid - contains vir genes A.tumefaciens ORI, TDNA deleted
Binary vector - ORI for E.coli and A.tumefacien, within TDNA left boarder and right boarder repeats have selectable marker gene and site for introducing gene of interest
What is binary vector system for Agrobacterium mediated plant transformation?
-binary vector engineered in E.coli and transferred to strain of A tumefaciens harboring a helper Ti plasmid
-vir genes act in trans and TDNA is transferred to plant cell where integrates into plant genome
-cells are selected for T-DNA uptake in planta as they will express the selectable marker
What is the process of regeneration of transformed plants using A bacterium?
1) remove discs from tobacco leaf
2) leaf disks are incubated with genetically engineered Agrobacterium for 24 hours
3) selection medium only allows plants that have acquired DNA from bacteria to proliferate
4) disks grown on a shoot inducing medium
5) Shoot transferred to a root inducing medium
6) Grow rooted seedling leading to an adult plant that carrys transgene originally present in bacteria