Lecture 17 - QF PCR Flashcards

1
Q

What is aneuploidy

A

the gain or loss of a chromosome

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2
Q

What is monosomy

A

the loss of a chromosome

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3
Q

What is disomy

A

two copies of a chromosome

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4
Q

What is trisomy

A

three copies of a chromosome

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5
Q

What is non-disjunction

A

the failure of one or more pairs of homologous chromosomes to separate normally during nuclear division resulting in an abnormal distribution of chromosomes

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6
Q

What is turner syndrome

A
  • 45 , X
  • caused by paternal non-disjunction
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7
Q

What is the frequency of turner syndrome

A

1 in 2500 newborn girls

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8
Q

What is the phenotype of turner syndrome

A

-short stature
-webbed neck
-low hairline
-loss of ovarian function
-cardiac defects
-kidney disease
-normal intelligence

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9
Q

What is klinefelter syndrome

A
  • 47, XXY
  • caused by paternal and maternal non-disjunction
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10
Q

What is the phenotype of klinefelter syndrome

A
  • tall with long limbs
  • small testes and penis
  • breast growth
  • decrease sexual interest
  • lower than average intellignece
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11
Q

what is the frequency of klinefelter syndrome

A

1/650 newborn boys in the US

1-2/1000 live male births in the UK

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12
Q

What is trisomy X

A
  • 47, XXX
  • caused by maternal non-disjunction
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13
Q

What is the phenotype of trisomy X

A
  • taller than average
  • developmental delays
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14
Q

What is the frequency of trisomy X

A

1/1000 female births in canada and the us

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15
Q

What is Jacob syndrome

A
  • 47, XYY
  • caused by paternal non-disjunction or post-zygotic cleavage errors
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16
Q

What is the phenotype of Jacob syndrome

A
  • tall
  • enlarged head
  • anti-social
  • learning disabiliities
  • usually fertile
17
Q

What is the frequency of jacob syndrome

A

1 in 1000 live male births

18
Q

What is patau syndrome

A
  • 47, XX+13 or 47, XY+13
  • caused by non-disjunction of either parent
19
Q

What is the phenotype of patau syndrome

A
  • small eyes
  • extra digits
  • cleft palate
  • heart and CNS defects
20
Q

What is the frequency of patau syndrome

A

1/16 000 newborns

~90% of infants die within a year

21
Q

What is edwards syndrome

A
  • 47, XX+18 or 47, XY+18
  • caused by maternal non-disjunction
22
Q

What is the phenotype of edwards syndrome

A
  • small, long head
  • small mouth
  • underweight
  • feeding and breathing problems
  • heart and genitorinary issues
  • severe cognitive impairment
23
Q

What is the frequency of edwards syndrome

A

1/5000 newborns

~90% of infants die within a year

24
Q

What is downs syndrome

A
  • 47, XX+21 or 47, XY+21
  • caused by maternal non-disjunction
25
What is the phenotype of downs syndrome
- craniofacial abnormalities - early-onset alzheimers - mild to moderate cognitive impairment
26
What is the frequency of downs syndrome
1/700 newborns
27
What are short tandem repeats
short nucleotide sequences that repeat multiple times
28
How can we determine STR
amplification via PCR that produces products of variable sizes
29
How is monosomy seen in STR
one PCR product
30
How is disomy seen in STR
two PCR products
31
How is trisomy seen in STR
three PCR products