Lecture 2: Cell cycle 2 Flashcards

1
Q

Give three men who got the Nobel Prize for research on how cells regulate cell proliferation.

A

Lee Hartwell
Tim Hunt
Paul Nurse

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2
Q

What is Saccharomyces cerevisiae?

A

Budding yeast, a model organism. It grows to a certain size, then grows a bud. the bud grows bigger then splits off as a new cell.

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3
Q

What Schizosaccharomyces pombe?

A

Fission yeast, another model organism. It divides by elongating and splitting into two once it reaches a certain length.

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4
Q

Discuss the evolutionary similarity of S. cerevisiae and S. pombe.

A

They are not very close to each other evolutionary. We humans have the same closeness to each yeast as they have to each other. This means that the system observed in the yeast is expected in humans too, because it has been conserved over a huge period of evolutionary history.

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5
Q

What did Nurse use in his experiments to study the cell cycle?

A

Cell division cell mutants (cdc mutants).

  • Short cdc mutants are formed when the cell divides before it has elongated.
  • Long cdc mutants are formed when the cell elongates but does not divide, so just gets longer and longer.
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6
Q

Explain complementation.

A

Complementation is a process by which a plasmid containing the wild type (normal) genes is introduced into a cdc mutant, ‘transforming’ it. Then the yeast that divides normally after being transformed is selected. These yeast must have been mutants because of a problem with genes which were replaced by normal genes in the plasmid. Then the plasmid is isolated from the yeast and it sequence is determined. This means that it is possible to find which gene was mutated to give that specific cdc mutant.

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7
Q

What were Nurse’s finding from the complementation experiment?

A

There are about 30 different cdc mutants. There are about 70 genes that cause elongated length. One of these genes turns out to be a key regulator of cell division cell, cdc2 (a protein kinase). Cdc2 is the gene, the protein kinase is encoded by the cdc2 gene.

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8
Q

Which amino acids in proteins does cdc2 protein kinase phosphorylate?

A

Serine and threonine (both have -OH groups)

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9
Q

What did Nurse notice about the relationship between the cdc2 level and cdc2 activity that was strange?

A

The cdc2 level stays constant, but the cdc2 activity changed during the cell cycle.

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10
Q

What are cyclins?

A

Regulators of the periodicity of the cell cycle (like cdc2 protein kinase).

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11
Q

Through which experiment by Hunt were cyclins discovered?

A

Cyclins were discovered by Hunt in an experiment involving sea urchin oocytes. These oocytes are large and readily available and are all arrested at the same stage in the cell cycle as they wait to be fertilised.

In the experiment Hunt added sperm to the oocytes, causing all the oocytes to start division at the same time, all in the same stage. This made it much easier to extract the protein whose levels were changing during the cell cycle. Instead of adding sperm, changing the pH level could make the oocytes think they’d been fertilised and start dividing at the same time.

The oocytes were preloaded with a radioactive marker.

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12
Q

What were the results of Hunt’s experiment?

A

It was found that the amount of cyclins present peaks just before mitosis., in the G2 stage. The minimum amount of cyclin is present in the G1 stage.

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13
Q

How do cyclins and cdc2 act together?

A

They are needed together to regulate the cell cycle periodicity. The cyclin physically binds to the cdc2 protein kinase to make it active. This means the cyclin is a regulatory subunit for cdc2 protein kinase and so cdc2 protein kinase is a Cyclin Dependent Kinase (cdk).

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14
Q

What happens when cdks are activated by specific cyclins?

A

When cyclin dependent kinases are activated by specific cyclins, they phosphorylate proteins, which either activates or inactivates them.

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15
Q

What happens after the cdk has done its work?

A

It is broken down by peptidases

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16
Q

What happens as the cells get more compact and there is less physical space to divide into?

A

The cells arrest in G1 phase, so most of the cells are in G1 phase.

17
Q

What is the restriction point?

A

The restriction point is the point in the cell cycle past which the cell is committed to dividing.

18
Q

What can’t the cell stop halfway through the cell division if it is past the restriction point?

A

There would be too many genome copies, because the genome is duplicated in the early stages of cell division. This is a feature of cancer cells (incorrect number of genome copies).

19
Q

What is retinoblastoma?

A

Cancer of the retina. It is seen as a white mass in the back of the eye (tumour). This occurs when the retinoblastoma protein has been mutated or lost.

20
Q

Define hyper- and hypophosphorylated.

A

Hyperphosphorylated - lots/maximum phosphorylation

Hypophosphorylated - minimal phosphorylation

21
Q

Describe when the retinoblastoma protein is hyper/hypophosphorylated.

A

The retinoblastoma protein is:

  • Hypophosphorylated in G1
  • Hyperphosphorylated in S/G2/M
22
Q

What is retinoblastoma protein phosphorylated by?

A

A cyclin dependent kinase, cdk (needs to be activated by a G1 cyclin).

23
Q

What happens if retinoblastoma is over-expressed?

A

Most of the retinoblastoma remains hypophosphorylated, so the cell stops dividing in the G1 phase.

24
Q

What is E2F?

A

A transcription factor, which binds to hypophosphorylated retinoblastoma protein in G1, forming an E2F-Rb complex.

25
Q

What is the function of E2F?

A

Transactivation of all the genes required for S phase entry:

  • S phase cyclin
  • DNA polymerase - replicates genome (important for S phase)
  • DHFR (dihydrofolate reductase) - makes nucleotides
26
Q

How does regulation lead to the cell leaving G1 phase and entering S phase?

A

The Rb-E2F complex is phosphorylated by G1 cyclin-cdk complexes. Once Rb becomes hyperphosphorylated, it dissociates from E2F. Now the cell is completely committed to division. The freed E2F can now express the proteins required for S phase.

27
Q

What happens if in G1 phase, the cell decides that the conditions are unfavourable for cell division?

A

The cell enters quiescence, G0, which means the that they are temporarily not dividing.

28
Q

Give an overview of the regulation of the stages.

A
  • G1 cyclin/cdk - pass through restriction point
  • S phase cyclin/cdk - initiation of DNA replication
  • G2 cyclin/cdk - Verify DNA replication (can stop to repair DNA here)
  • M phase cyclin/cdk - activate APC (anaphase promoting complex), promote nuclear envelope breakdown(check that chromosomes are correctly aligned, if so start anaphase)