Lecture #2 - Cell Structure & Function PART 3 (after MT) Flashcards
The Endosymbiotic Hypothesis
Mitochondria and chloroplasts evolved from…
BACTERIA
The Endosymbiotic Hypothesis
Mitochondria and chloroplasts evolved from bacteria
Evidence
• SEMI-AUTONOMOUS (organelle can divide & function independent of the rest of the cell!)
- the way bacteria complete binary fission
• CIRCULAR CHROMOSOMES
- Lack histones (Euk property - so fact that these euk organelles have DNA that’s devode/absent of any histone proteins is an indication that it’s likely a prok. origin (or at least not a euk. origin)
• 70S RIBOSOMES - bacterial attribute
- euk’s on their own in their cytoplasm, contain 80S ribosomes
• TWO MEMBRANES (Gram - have 2 membranes also)
• OUTER MEMBRANE HAS PORINS - same as the outer membrane of Gram - bacteria!
- allow opp. for you to bring in hydrophilic like substances non-specifically
Where did the specificity come from, when we discussed nutrient uptake, if the porin is non-specific & just provides a pore?
ABC transporters & other channels/transporters embedded in the plasma membrane
ETC is in the ____ mitochondrial mem., which is like the PM of _____ (where the ETC is located there also)
INNER
BACTERIA
- like a prok. PM as the innermost structure
The ancestor of chloroplast became…
trapped inside a larger cell & now it’s the chloroplast organelle for plants
The ancestor of mitochondrion became…
trapped inside a cell & now its become the respiring organelle for all of these other cells
What does the branchpoint on the phylogenic tree of Bacteria, Euk, & Archaea suggest?
that based on genetic analysis shows that Euk & Archaea are gonna have MORE close relationships with one another than they have with bacteria, which constitute its own branch on this phylogenic tree
- interesting b/c you would anticipate that Bact & Archaea (both prok) would be more related to one another & that’s not the case
- but just b/c their both prok. doesn’t mean much - more a structural detail then it is a telling det about any of the characteristics
Mitochondria
- Most closely related to Rickettsia
- Proteobacteria (phylum Rickettsia fit into)
• Obligate intracellular pathogens
- means they have an obligation to be inside of another cell, & their pathogenetic which means they cause disease specifically RMSF)
• Ex) Rocky-mountain spotted fever
- still bacteria - even though description sounds a lot like they’re viruses (which isn’t true)
- still bacterial organisms, it’s just that they have dev. a tendency/desire to be on the inside of the cell
Chloroplasts
- Most closely related to Cyanobacteria (*photosynthetic ability)
- Blue-green algae (typically cyanobacteria blooms)
What can you tell me about the gram stain. If you were to do a gram stain on Rickettsia & a gram stain on Cyanobacteria & you expected that there was no weirdness or cellular modification, what gram stain would you expect to find?
should be pink –> b/c they got 2 diff. mem’s (the outer mem has porins & ETC in inner mem further supporting fact that its a gram - structural organization), have 70S ribosomes & circular chromosome to indicate the fact that their capable of bacterial cellular interior & bacterial function as well
What was thought to be the v. 1st life form?
Archaea
- able to survive conditions of early Earth –> b/c it was so hot & these organisms are able to handle those excessively high temps & the Euk would evolve after bact. b/t they have organelles
- able to use H2 gas to power their cell (which was v. abundant)
- doesn’t mean ALL archaea evolved 1st, then all bact & all euk –> you just look at organisms that are able to tolerate the temps
What colour should the gram stain be of Rickettsia & Cyanobacteria?
PINK
Viruses
- Acellular infectious particles
* Obligate intracellular pathogens
What does, “Acellular infectious particles” mean?
non-living, goes into a cell & creates a +/- = parasitic relationship (virus benefits & host cell doesn’t), v. small but it’s there
What does, “Obligate intracellular pathogens” mean?
• Reproduce ONLY INSIDE of living cells
• LACK independent metabolism
–>NOT free-living
has an obligation to be in the boundaries of the cell, in order to actually execute viral replication, within the cell, that it has an obligation to be within the boundaries of the cell, in order to execute viral replication, & is disease causing
Are viruses free-living?
NO - lack independent metabolism
think: on desk you put sugar, lipids, iron, sodium, water, potassium - anything that’s needed for a living cell to thrive, & then you put virus on top (cough SARS-COV 2 on top of that pile of nutrient for ex), you would NOT get SARS-COV 2 replication (not able to), b/c it doesn’t have the machinery & enzymes for glycolysis & TCA cycle or for fermentation, it doesn’t have ribosomes to protein assembly –> therefore lacking independent metabolism & are therefore NOT free-living
- they’re only able to make more of themselves, if they’re inside of a living cell that provides them with machinery in order to be able to do so
- the virus itself couldn’t infect you, but on the pile on its own don’t expect increase in #
- to contrast, if you put bacteria that were free-living on that pile of nutrients & provided the temp & the pH was within the range for growth, you would def. expect that the # of bacterial cells that fell on that pile of nutrients would now start to increase as a result of growth b/c they do have enzymes for growth, ribosomes for protein syn & can replicate their own nucleic acid, so you can see the diff b/t a virus & a living cell
Viruses are composed of at least 2 parts:
- Nucleic acid GENOME (DNA or RNA) and protein coat (CAPSID)
- Together=NUCLEOCAPSID (bare min)
(DNA or RNA are the recipes to allow for assembly of viral material)
DNA: hepatitis b, HPV, EBV (casues mono) ALWAYS a DNA virus & will NEVER change
RNA: HIV, Covid, Influenza ALWAYS a RNA virus & will NEVER change
Some viruses have an envelope
layer of LIPID surrounding the nucleocapsid
Naked virus
what the collective structure (nucleocapsid) is referred to as
- nucleocapsid - also framework for what we call naked viruses (1 category of viruses)
nucleocapsid - bare min
- proteins - like a protein-shell
- 3-D dome with nucleic acid inside
- nucleic acid - provides recipe for whatever the virus knows it needs to make on its own
- think: if someones coming to your house & they know you don’t have chicken & that’s the only thing they want, that’s the only thing they will bring, pay for & buy b/c everything else they know will be provided - so why waste their space & money on it if they can just use yours & parasitize you
- capsid
- spike proteins - embedded on OUTER surface of the capsid for naked virus - are unique viral characteristics as is the capsid protein
Will they find info in YOUR cell to build their capsid protein or to build their spike protein? If not, where is the recipe to make spike protein & capsid protein?
NO - it will be on their DNA or RNA
Comparison of naked & enveloped virus particles
- the envelope originated from host cytoplasmic membrane
Naked:
- Nucleocapsid: nucleic acid & capsid (composed of capsomeres)
Enveloped:
- Nucleocapsid: nucleic acid & capsid
- Envelope
Enveloped virus
takes time to build an envelope on the outside of the structure & that’s where the spike protein will get embedded or inserted b/c that’s now the outermost layer
Imp. things about the viral structure:
- This envelope is acquired from _____ when the virus leaves your cell
- This envelope is acquired from YOUR PM when the virus leaves your cell
- so characteristically, what will this envelope be structurally v. similar to?
- it would look exactly like a PM b/c that’s where it came from - BUT it is NOT a PM
- b/c a PM surrounds a living cell creating the boundaries of that cell
- the PM is also gonna provide selective permeability & this envelope does none of that - it’s just an outer layer that it picked up in the process that it uses to leave your cell
- needs it for infectivity b/c that’s where its spike proteins are & spike proteins are critical for infectivity
Imp. things about the viral structure:
- Anything that disturbs this envelope, disturbs ____
INFECTIVITY
- Covid, HIV, influenza are ENVELOPE VIRUSES
- so any chemical disinfectant that you use that would disrupt a lipid bilayer like a PM will disrupt this envelope, & when it does you lose it, which took the spike protein that were needed for infectivity