Lecture 22 - HIV (1) Flashcards
(32 cards)
Which groups are most commonly represented with new HIV infection?
Men who have sex with men (MSM)
What are some factors associated with the HIV epidemic?
Behavioural & social:
* little/no condom use
* multiple, overlapping sexual partners
* large sexual networks
Biology:
* high STI rate → predisposes to HIV and other STIs
* low rates of male circumcision
In which family is HIV?
What are some features of this family?
Lentiviridae family (cause disease slowly)
retroviruses
icosahedral capsid symmetry
enveloped
ssRNA, + sense
genome replicated in the nucleus
capsid assembled in the cytoplasm
What are the two major categories of retroviruses?
To which does HIV belong to?
- Non-primate retroviruses
o CAEV/Visna Caprine arthritis encephalitis / Visna Virus
o EIAV Equine Infectious anaemia virus
o BIV Bovine Immunodeficiency virus
o FIV Feline Immunodeficiency virus - Primate viruses
o African Green Monkey SIVagm
o Sooty Mangabey SIVsm (HIV-2)
o Macaque SIVmac
o Mandrills SIVmnd
o Sykes monkeys SIVsyk
o Chimpanze SIVCPZ (HIV-1)
HIV belongs to the primate category
Outline the HIV genome
- ssRNA
- sense
- 3 main genes:
1. gag (structural proteins): MA-matrix, CA-caspid, NC-nucleocapsid
2. pol Reverse transcriptase (RT): Integrase (IN), Protease (PR)
3. env (envelope glycoproteins) – gp120 and gp41; the entrance tetramer that binds CD4, leading to entry, SU-surface: cell attachment, TM-transmembrane, fusion domain
What can be said about + sense RNA?
Same as mRNA, and thus can be translated directly
Describe the structure of the HIV virion
Env: gp120, gp41
Envelope
Matrix
Capsid
Nucleocapsid
Reverse transcriptase
Integrase
Protease
What are HIV clades?
What can we say about their global distribution?
These are the HIV subtypes
Clades allows for HIV to inherently have diversity
US, Europe & Australia share clade
Subsaharan Africa & India share clades
South America
Describe the life cycle of HIV
- CD4 - gp120 binding
- CoR engagement
- Fusion
- Reverse transcription of viral genome into DNA
- Integration of proviral DNA into host genome
- Transcription of DNA into viral RNA
- Translation
- Assembly
- Budding
- Maturation into new HIV virion
The step of integration is the key to retroviruses and the reason as to why we can’t cure HIV
What are the key features of HIV replication?
- Rapid
- Error prone reverse transcriptase leads to rapid evolution of multiple quasispecies
Describe the engagement of receptors that leads to fusion of the HIV virion with the host cell
- Viral gp120 protein binds CD4 on the host cell
- Conformational change, revealing CoR binding site
- CoR binds gp120-CD4 complex which binds to CCR5 or CXCR4 on host cell
- Virus fuses with host cell membrane, facilitating viral entry
What and where is the CoR?
The Co-receptor
* CCR5
* CXCR4
It is on the CD4+ T cell
What are the various chemokine receptors on CD4+ T cells that HIV can bind to?
These are the Co-receptors
CCR5
* Engaged by R5-HIV
CXCR4
* Engaged by X4 HIV
NB D/M HIV expressed gp120 that can bind both CCR5 & CXCR4
This ability to infect both cells occurs over time
Describe a case of natural resistance to HIV
- There exists a mutation in CCR5: CCR5 Δ32
Heterozygotes:
* delayed progression to AIDS / death
Homozygous for the mutation
* rare infection with R5
NB The CCR5 Δ32 mutation does not affect immune function –> Those without CCR5 or low levels of its expression still have normal immune functioning as it is not required to survive
Which cells does HIV infect?
Cells expressing CD4:
* ‘helper’ T cells
* monocytes & macrophages
* DCs
What are the innate anti-viral cellular factors and their roles?
APOBEC3G: Edits RNA
TRIM 5a: Blocks uncoating of retroviruses
Tetherin: Blocks release of virus
LEDGF: Tethers HIV to host chromatin
What is the corresponding HIV protein to APOBEC3G?
vif
What is the corresponding HIV protein to TRIM 5a?
caspid - inactivates human TRIM 5a
What is the corresponding HIV protein to tetherin?
vpu - inhibits tetherin from exiting
What is the corresponding HIV protein to LEDGF?
integrase - facilitates HIV integration
What are the two major forms of HIV infected cells?
Productive infection: DNA positive, RNA positive, HIV protein positive, DEATH
Latent infection: DNA positive, RNA negative, HIV protein negative, SURVIVAL
When is the initial peak of viraemia in HIV?
21 days after HIV exposure
What are the early events in HIV transmission in females?
- Crossing the barrier: In the female reproductive tract, HIV is capable of infecting both the endocervix and the cervicovaginal epithelium
* Can infect the cervicovaginal epithelium through a microbreak in the epithelium
* Can infect the endocervix by binding to the dendritic cell - Local expansion (3-4 days): envelope on HIV binds with co-receptor on CD4 T cell –> activated and resting CD4+ T cells are infected
- Dissemination to lymphatic tissue: local proliferation (1-2 weeks), peak plasma virus levels + CD4 memory cell loss –> partial immune control
What is HIV?
HIV (Human Immunodeficiency Virus) infection
In the early stages of HIV infection, individuals may experience flu-like symptoms, such as fever, fatigue, and swollen lymph nodes.
As the disease progresses, the virus attacks and destroys the immune system, leading to the development of opportunistic infections and cancers.