Lecture 3B Flashcards

(54 cards)

1
Q

low-potential electron donors (are more _______________)

A

Electronegative

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2
Q

what happens to low-potential electron donors?

A

Oxidized

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3
Q

where are the resulting electrons driven through?

A

Electron transport chain

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4
Q

How is proton motive force (PMF) arise?

A

Due to movement of electrons

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5
Q

the terminal electron acceptor in Aerobic respirations

A

Oxygen

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6
Q
A
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7
Q

How is fermentations different from aerobic respirations

A

Fermentation: do not require external electron acceptors, generates ATP through subtrate-level phosphorylation

Aerobic respirations: can generate ATP through ETC

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8
Q

mV value of NADH/NAD+

A

−320 mV

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9
Q

mV value of FADH2/FAD, Em,7

A

+31 Mv

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10
Q

mV value of
HCO2−/CO2, Em,7 =

A

−420 mV

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11
Q

mV value of
succinate/fumarate, Em,7 =

A

+31 mV

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12
Q

mV value of
H2/H+, Em,7 =

A

−420 mV

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13
Q

mV value of
O2/H2O, Em,7 =

A

+815 mV

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14
Q

mV value of
NO/N2O, Em,7 =

A

+1,300 mV

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15
Q

small organic compounds that can donate electrons

A

Formate and succinate

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16
Q

In Aerobic bac. ETC;
redox spans gives rise to a thermodynamic driving force of more than

A

1eV

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17
Q

In Aerobic bac. ETC; Each proton transport across the membrane has a thermodynamic cost of around

A

4.6 Kcal mol^-1

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18
Q

In Aerobic bac. ETC;
with an ~1-V redox span between the initial donor and acceptor, how many protons are pumped for each electron transferred?

A

Five protons

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19
Q

Why is stepwise drop in potential along the respiratory chain imporant?

A

It allows for energy conservation rather than dissepated as heat.

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20
Q

also forms an integral part of the proton-motive respiratory machinery

A

Cell membrane

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21
Q

How does cell membrane forms a important machinery in PMF?

A
  • Provides an isolating layer
  • Lipid hydrocarbons establishe proton conduction pathways, and proton uptake
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22
Q

Lipid composition of bacterial cell wall

A
  • zwitterionic
  • anionic
  • highly glyosylated lipids
23
Q

a lipid that is 75% in E. coli

A

Phosphatidylethanolamine

24
Q

a lipid that is 20% in E. coli

A

Phosphatidylglycerol

25
a lipid that is 5% in E. coli
Cardiolipin
26
lipids that is composed in the Actinobacteria
Phophatidylinositol and phosphatidylinositol mannosides
27
can switch to alternative electron acceptors
facultative anaerobes
28
_______ electron acceptors used by facultative organisms include those that are fairly near the O2 /H2O couple, such as many inorganic and organic compounds, and metals such as Fe3+ and Mn4+.
Alternative
29
These microorganisms use more electronegative electron acceptors often employ enzymes that are inhibited oxygen
Obligated anaerobe
30
Chemolithotrophs are microbes that conserve energy from the oxidation of inorganic electron donors.
Chemolithotrophy
31
examples of chemolithotrophy oxidation
- Hydrogen oxidation - Sulfur oxidation - iron Oxidation
32
Simpliest form of chemolithotrophs
Hydrogen bacteria
33
Final product of classifcal hydrogen bacteria
Water and ATP
34
the Two Hydrogenase in H2 Oxidation
- membrane-integrated hydrogenase - cytoplasmic hydrogenase
35
Why is H2 in oxic environments fleeting?
- Most biological H2 production is the result of fermentation - H2 is utilized by several anaerobic bacteria and archea
36
The model for studying H2 Oxidation
gammaproteobacterium Rolstania eutropha
37
Final oxidation product of H2 Oxidation
Water
38
Final oxidation product of Sulfur oxidation
Sulfate
39
Most common sulfur compounds as electron donors
- Elemental sulfur - Hydrogen Sulfide - Thiosulfate - (minor) sulfite
40
The system that allows sulfur oxidizing bacteria to oxidize sulfur
Sox system
41
WHich organism is SOX system has been decribe in?
Paracoccus pantotrophus
42
SOX system contains over ________ encoding various cytochromes and other proteins necessary for the oxidation of reduced sulfur compounds directly to sulfate.
15 genes
43
Elements of the Sox system are found in diverse ___________
Sulfur chemolithotrops and photrophic sulfur bacteria
44
organisms that oxidize sulfide to obtain reducing power for CO2 fixation rather than for energy conservation.
Phototrophic sulfur bacteria
45
Four Keu Proteins in SOX system
SoxXA SoxYZ SoxB SoxCD
46
The first enzyme in sox system that forms heterosulfide bond between the sulfur compound and SoxYZ
SoxXA
47
it releases sulfate from oxidatuon of the sulfur compounds
SoxB
48
sulfur dehydrogenase; a key enzyme that mediates removal of 6e- from sulfur compound bound to SoxYZ
SoxCD
49
it is used by other organisms in the absence of Sox CD
DSr AB
50
An enzyme homologous to the enzyme sulfite reductase found in sulfate reducing bacteria
DsrAB
51
aerobic oxidation of ___ to ___ , supports the growth of chemolithotrophic "iron bacteria"
Ferrous iron (Fe2+) to Ferric ion (Fe3+)
52
Aerobic respiration of Ferrous to Ferric ion supports what?
Growth of Chemolithotrophic Iron bacteria
53
pH level of Nitrogen organisms at neutral pH
+0.2
54
at acidic pH what is the pH of iron organisms?
+0.77V