Malaria Atlas Project Flashcards

1
Q

Malaria

A

» Mosquito-borne disease, endemic in only some parts
of the world
» Symptoms can be mild or life-threatening
- Mild symptoms include fever, chills, and headache
- Severe symptoms include fatigue, confusion, seizures,
and difculty breathing
» Some people are at higher risk of severe infection:
children under 5 years, pregnant women, travelers,
and people living with HIV
- Children under 5 are at greatest risk of dying from
malaria, representing around 60-80% of all deaths

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1
Q

Malaria transmission

A

» Spread through bites of infected
Anopheles mosquitoes - Not directly person to person
» Micro-organism = Plasmodium - P. falciparum - P. vivax » Life-cycle: after infection the
parasite spreads to a person’s
liver, then to their blood, then to
another mosquito

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2
Q

Burden of disease due to malaria

A

Globally, 1.1% of all deaths due to malaria In Nigeria, 12.5% of all deaths due to malaria

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3
Q
A
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3
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4
Q

Key points

A

» Malaria is a mosquito-borne disease that is endemic in only some parts of the world.
» The two most common types of malaria are Plasmodium falciparum and Plasmodium vivax.
» In some countries, malaria is one of the biggest causes of death (e.g. 12% of all deaths in
Nigeria), and one of the top three causes of death in children under fve.
» Multiple methods of prevention (insecticide treated bed nets, indoor residual spraying,
seasonal malaria chemoprevention, vaccine) and treatment (artemisinin-based
combination therapy).
» Global programs have been efective in controlling malaria, though progress has stalled over
the past ten years.

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4
Q

Artemisinin-based combination therapy (ACT)

A

» Relatively quick and efective treatment for mild
cases of malaria
- Three-day course of tablets
» In some countries, community case management
of malaria through volunteer/paid community
health workers
- Children with fever given ACTs and referred to the
nearest health centre
» For severe malaria, patients need intravenous or
intramuscular treatment

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4
Q

Malaria prevention and treatment

A

» Malaria can be prevented by avoiding mosquito
bites and with medicines.
- Vector control
* Indoor residual spraying (IRS)
* Insecticide treated bed nets (ITNs, LLINs)
- Pharmaceuticals
* Seasonal malaria chemoprevention (SMC)
* Malaria vaccine
» Treatments can stop mild cases from getting worse.
- Artemisinin-based combination therapy (ACT)

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4
Q

Insecticide treated bed nets (ITNs)

A

» Highly efective and responsible for a
large part of the global reduction in
malaria cases since 2000
» Requires people to have a net (access)
and to sleep under it (use)
» Net quality and insecticide
efectiveness can deteriorate over time
- Regular ITN distribution campaigns
are needed

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5
Q

Malaria

A
  • Malaria is a major global disease
  • Caused by the Plasmodium parasite (Plasmodium falciparum, plasmodium vivax, etc.)
  • Spread by the Anopheles mosquito
  • Accounts for approximately 600 thousand deaths a year (>1 per minute)
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6
Q

The global fight against malaria

A

Malaria funding saw a major increase from 2000 to 2010 (MDGs)
* Substantial reductions were achieved but we remain far from global eradication, and the
funds are still not enough (it is estimated around $7.8 bn USD was required in 2022).

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7
Q

The global fight against malaria

A

How can we make progress?
* Needs more resources
* Resources need to be used more effectively

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7
Q
A

How do we achieve this?
Improved situational awareness:
* Malaria risk is very variable across space & time
* So where do we target resources?

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8
Q
A

The Malaria Atlas Project (MAP) was founded in 2005 with the aim to develop
a quantitative evidence base on the global distribution of malaria risk

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9
Q

Geospatial Statistics

A

Decision making under uncertainty
we can’t know exactly the nature of malaria risk throughout a country but we can be rigorous in describing our
uncertainties: this allows assumptions and sensitivities to be tested

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9
Q

Statistical Models

A

Malaria-metric data is ‘noisy’ and incomplete (only a small fraction of children in a small
fraction of villages are surveyed at any given time): we need statistical models to make
useable maps

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10
Q

MAP: History

A

2005 – 2019: Oxford
* Three pillars of activity:
* Data - ongoing assembly and curation of all available (georeferenced) malaria data + climatic & environmental
information
* Analysis - development of wide range of statistical models to
use these data to address policy relevant questions
* Engagement and dissemination – Passive (MAP
website); Active via policy engagement, collaboration
* Progressive growth in funding, team, scope, impact over the years

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10
Q

But why do we need a model?

A

Data is sparse
In space… And in time….

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10
Q

Geospatial Statistics

A

Concerned with statistical inference using geographical data
* Emerged from the field of mining: ‘kriging’ method to estimate
ore body volumes (esp. Georges Matheron: 1930-2000)
* A new era thanks in part to increasing computational power (esp.
Peter Diggle: ‘model based geostatistics’; Sylvia Richardson &
Nicky Best)

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10
Q

MAP: History

A

Since Sept 2019: Curtin and The Kids Research Institute Australia
* (Gradual) relocation of entire program: Team of 30 in Perth
* Primarily BMGF funding - portfolio approx $15M

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11
Q

Challenges facing MAP

A
  • Inaccurate/incomplete data
  • Lack of adequate information on contextual factors
    Routine surveillance data offers the possibility of continuous risk monitoring, but there remain issues with accuracy of
    data capture and missingness from non-attendance
12
Q
A

Tobler’s first law of geography:
“everything is related to everything
else, but near things are more
related than distant things”

13
Q

A model allows us to

A
  • Fill in the gaps
  • Standardise observations between locations, timepoints, and methodologies
  • Inform policy-making, funding decision, and to track our progress against malaria
14
Q

Challenges facing MAP

A

Human geography:
* people’s movements through the risk and
treatment landscape complicate data
interpretation and modelling
e.g. place of residence not necessarily place of infection
* data on behavioural factors such as time spent
outside during peak mosquito feeding hours is
scarce

14
* point data: observations from a single location (has GPS coordinates, village/school name): e.g. survey of patent parasitaemia amongst children from a given village
14
Challenges facing MAP
Updating and innovating our methods whilst maintaining a consistent historical view to track progress in malaria fight MAP provides estimates for the World Malaria Report and Global Burden of Diseases studies: consistency of method is very important for continuity
14
Challenges facing MAP
Decolonising global health: how to be an effective ally for emerging scientists from LMICs * opening of new MAP office in Tanzania (Susan Rumisha; Punam Amratia) * taking training and workshops to endemic countries; focus on NMCPs and stakeholders * collaborations and sub-awards/consulting to local researchers (e.g. Ezra Gayawan; FUTA)
15
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Geographical data for the geography of malaria
geographical (γῆ-γραφω) data: data on people, environment, climate etc. tied to location (and time)
17
* geographical image data: a pixel-grid of observations (has a coordinate system): e.g. satellite-based radar elevation measurements
18
* areal data: observations covering an extended region (has a described boundary): e.g. counts of reported malaria cases in a local government area
19
MAP: Data
* Environmental/climatic covariates (geographical image data) coordinate system, time, measurement there is a lot of work to process the original satellite-based products into useable covariates (gap-filling for cloud cover, bad pixels, etc)
20
MAP: Data
* Infection surveys (roughly 50,000 datapoints) (point data): location, time, number positive, number tested
21
MAP: Data
* Case reporting (~90,000 admin units) (areal data) area, time, number of cases primarily passive surveillance: relies on cases reaching a health clinic and being captured in reporting systems
22
23
Malaria
* Clinical malaria (uncomplicated): fever, chills, headache, sweating, nausea (249 million clinical cases globally in 2022)
23
Malaria
* Severe malaria: loss of consciousness, seizure, severe anemia, difficulty breathing (608k deaths globally; mostly children)
24
Malaria
* Economic costs: loss of productive work days / school days; cost of medicine and care seeking
25
Malaria treatment and prevention
* Chemoprevention treatments: mass coordinated distribution to vulnerable populations including children and pregnant women to clear infections and interrupt transmission. This includes o Seasonal malaria chemoprevention (SMC) - for children 6mnth – 5yrs o Intermittent preventive treatment for pregnant women (IPTp) o Perennial malaria chemoprevention (PMC) - for children below 2 yrs o Mass drug administration (MDA) - for populations in low malaria settings
25
Malaria treatment and prevention
* Artemisinin-based combination therapy (ACT): quick reduction in parasite load from artemisinin then longer acting partner drug takes care of remainder * Insecticide-treated bed nets (ITN): prevent infection (kill mosquitos + physical barrier) * Indoor residual spraying (IRS): insecticide coating on walls kills resting mosquitoes
26
Three main streams of work
27
Skills, Backgrounds and Experiences
27
Our goals
* We assemble global databases on malaria risk and intervention coverage, and develop innovative analysis methods that use those data to address critical questions.
28
Our goals
* These include better understanding the global landscape of malaria risk, how this is changing, and the impact of malaria interventions.
29
Our goals
* By modelling burden, trends, and impact at a fine geographical scale we support informed decision making for malaria control at international, regional and national scales.
30
Why do some countries have more cases of malaria than other countries?
● Different country population size – more people in a country means more possible cases of malaria (or of any disease) ● Different mosquito populations (specifically, Anopheles mosquitoes) ● Different capacities to prevent and treat malaria (i.e. stronger/weaker health systems) ● Different baseline prevalance of the disease - more humans with malaria makes it more likely that mosquitoes will pick it up and transmit it
30
Describe three different malaria prevention strategies
● Malaria can be prevented by avoiding mosquito bites and with medicines. ○ Vector control ○ Insecticide treated bed nets (ITNs, LLINs) ○ Indoor residual spraying (IRS) ○ Reducing/treating stagnant water Pharmaceuticals ○ Seasonal malaria chemoprevention (SMC) ○ Malaria vaccine
30
Insecticide Treated Bed Nets (ITNs) are an effective way to prevent malaria. If you were going to run an ITN distribution campaign, how would you design it?
● Needs to include components for BOTH “access” and “use” ● ACCESS - making sure every household has an ITN - ideally, at least 1 ITN for every 2 people ○ Can distribute via health facilities, schools, central pick-up points ○ Priortise families with children, pregnant women ● USE - making sure people are actually sleeping under the nets (through awareness-raising, education, behaviour change programs) ● Frequency = campaigns every 2 to 3 years, because ITNs degrade in quality and effectiveness over time
31
● Why do we need data on malaria? ● What is the difference between “empirical data” and “modelled data”? ● Why, specifically, do we need “modelled data” on malaria?
31
Should a country prioritise prevention, treatment, or both if they experience: 1. A high number of cases, but few deaths 2. A low number of cases, where most result in death 3. A high number of cases, where most result in death
● Need to determine whether to focus on prevention or treatment ○ If high number of cases, but few deaths, priority would be prevention (i.e., to reduce malaria cases and therefore malaria MORBIDITY) ○ Can do this through ITN campaigns, indoor residual spraying, seasonal chemoprevention, malaria vaccine ○ If low number of cases AND same number of deaths, you should likely focus on treatment (i.e., to reduce those few cases from progressing to severe/life-threatening malaria) ○ Can do this through increasing access to artemisinin-based combination therapy (ACTs); for example, through community health workers ○ If high number of cases AND high number of deaths, you could arguably focus on both prevention and treatment -whichever is likely to be most effective ● Key point - it can depend, but in all scenarios, if there are any cases and any deaths, both prevention and treatment are likely to have some effect