modern applications of microbial genetics Flashcards

1
Q

what is biotechnology

A

using living systems to benefit humankind, direct alteration of an organisms genetics to achieve desirable traits

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2
Q

what does genetic engineering involve

A

the use of recombinant dna technology

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3
Q

what is recombinant dna technology

A

the process where dna sequence is manipulated in vitro creating recombinant dna molecules that have new combinations of genetic material

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4
Q

what is transgenic

A

when dna is entered into a different host species the host organisms is transgenic

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5
Q

what is an example of transgenic bacteria

A

insulin from humans being inserted into a plasmid and then into bacteria allowing them to produce and secrete human insulin

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6
Q

how do prokaryotes acquire foreign dna

A

conjugation
transduction
transformation

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7
Q

what was the first molecular cloning

A

when cloned genes from the African clawed frog was inserted into bacterial plasmid that was then introduced to e coli

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8
Q

what is molecular cloning

A

methods to construct recombinant dna and incorporate it into a host organism

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9
Q

what are dna molecules manipulated with in recombinant dna

A

naturally occurring enzymes derived from bacteria viruses

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10
Q

what makes recombinant dna possible

A

restriction endonuclease (restriction enzymes)

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11
Q

what are restriction enzymes

A

bacterial enzymes produced as a protection mechanisms to cut and destroy foreign cytoplasmic dna mostly from bacteriophage infection

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12
Q

how are restriction enzymes used

A

to cut dna fragments that can be spliced into another dna molecule to form recombinant molecules

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13
Q

what is a recognition site

A

a specific usually palindromic dna sequence between four to six bace pairs

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14
Q

what is a palindrome

A

a sequence of letters that reads the same forward as backwards, same sequences in the 5’-3’ to 3’-5’

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15
Q

what does it mean to anneal

A

form hydrogen bonds between complementary bases at their sitcky ends

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16
Q

what does annealing allow

A

hybridization of the single strand overhang

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17
Q

why dont blunt ends attach as well as sticky ends

A

lack of complementary overhangs facilitating the process

18
Q

what is hybridization

A

joining together two complementary single strands of dna

19
Q

how are single strands rejoined

A

ligation, dna ligase rejoins the two-sugar phosphate backbones through covalent bonding

20
Q

what are plasmids

A

small pieces of double stranded dna that replicate independently of the bacterial chromosome

21
Q

what is a vector

A

dna molecules that carry dna fragments from one organism to another, usually plasmids

22
Q

what is a polylinker site

A

a short sequence containing multiple unique restriction enzyme recognition sites used for inserting dna into the plasmid after restriction digestion of dna and the plasmid

23
Q

what does having multiple restriction enzymes recognition sites within a polylinker do

A

makes plasmid vector versatile so it can be used for different cloning experiments with different restriction enzymes

24
Q

where is the polylinker site found

A

within the reporter gene

25
what is the reporter gene
a gene sequence artificially engineered into the plasmid that encodes a protein that allows for visualization of dna insertion
26
what does the reporter gene allow researchers to do
to distinguish host cells that contain recombinant plasmids with cloned dna fragments from host cells that only contain nonrecombinant plasmid vector
27
what is the most common reporter gene
lacZ gene
28
what does the lacZ gene encode
beta galactosidase
29
what does beta galactosidase do
degrades lactose and synthetic analog x-gal
30
what is shown on x-gal containing colonies
blue colonies
31
when is the lacz gene disabled
when recombinant dna is spliced into the plasmid
32
what is the most commonly used mechanism for introducing engineers plasmids into a bacterial cell
transformation
33
what is transformation
when bacteria takes up free dna from their surrounding
34
where does free bacteria come from in nature
lysed bacterial cells
35
where does free dna come from in the lab
from recombinant plasmids introduced into the environment
36
how is a cell made more competent
by increasing the permeability of the cell membrane
37
how do you increase the permeability of the cell membrane
chemical treatments that neutralize charges on the cell membrane or exposing bacteria to an electric field that makes microscopic pores in the cell membrane
38
come back to molecular cloning
39
what is a genomic library
a complete copy of an organisms genome contained as recombinant dna plasmids engineered into unique clones of bacteria
40
what is the purpose of a genomic library
allow researchers to creat large quantities of each fragment to determine sequence and function of any genes
41