Nucleic Acid Flashcards
(33 cards)
Nuclei’s acid discovered by
In and called it
Term nuclei acid
Are
=
F . Meischer
Pus cell , nucleic
Was given by Altman
Polymers of nucleotide
= nitrogen base + Pentose sugar+ phosphate
Pyridines consist
Eg
Purine
Of one pyrimidine ring [2N+ 4C ]
Cytosine , uracil, thymine
Consist of 2 rings pyrimidine ring [2N+ 4C ] and imidazole ring [ 2N+3CJ
Adenine and guanine
Pentose sugar:-)
N2 base forms bond
Forms bond with sugar Pyrimidines
Purines
Phosphate forms ( to complete nucleotide ) ( bond)
With first carbon of pentose sugar to from a nucleoside
Nitrogen of first placeN1 forms bond with sugar
Nitrogen of ninth placeN 2 forms bond with sugar
Phosphate forms ester bond [ covalent bond) with 5th carbon of sugar
AMP
dAMP
Adenine + ribose = adenosine
Adenine + phosphate = adenylic acid
Adenine+ deoxyribose= deoxyadenosine
Deoxyadenosine + p = deoxyadenylic acid
GMP
dGMP
Guanine + ribose = guanosine
Guanosine + p = guanylic acid
Guanine + deoxyribose = deoxyguanosine
Deoxyguanosine + p = deoxyguanylic acid
CMP
dCMP
Cytosine + ribose = cytidine
Cytidine + p = cytidylic acid
Cytosine + deoxyribose = deoxycytidine
Deoxycytidine + p = deoxycytidine acid
UMP
dTMP
Uracil + ribose = uridine
Uridine + p = uridylic acid
Thymine + deoxyribose = deoxythymidine
Deoxythymidine + p= deoxythymidylic acid
DNA
Discovered by
Term given by
Pentose sugar
Nitrogen bases
Meischer
Zachary’s
Is deoxyribose sugar
A,T,G,C
Wilkins & Franklin
According to them
Watson and Crick proposed
According to them
Studied dna with help of X-ray crystallography
Both the strands of Dna are parallel to each other
Proposed a double helix model for DNA
DNA is composed of two polynucleotide chains
In dna both polynucleotide
Direction of phosphodiester is
Both strands of DNA ( bond ) +nt b/w
Chains are complimentary and antiparallel to each other
Is opposite
Are held together by hydrogen bonds
+nt b/w N2 base
Hydrogen bond
Adenine & thymine
Cytosine & guanine
Structure of dna strand s
By two h bonds
By 3 h bonds
Two strands of dna are helically coiled like a revolving ladder
Reilings of this ladder ( backbone
Steps /bar
Distance b/w two successive steps
One complete turn on dna
Length of one complete turn is
Phosphates + sugars
Pairs of N2 base
Is 3.4 Armstrong
10 steps
34 Armstrong
Length of one complete turn also called
Diameter of dna
Molecular weight of dna
In eukaryotes dna associated with
As pitch of helix /dna ,one coil
20 Armstrong
10 power 6 to 10 power 9 dalton
Histone proteins to form nucleoprotein
DNA and histone linkage
Linear dna
Circular dna
Bacteriophage dna (174)
Mg+2
Chromosomes
Prokaryotes,mitochondria,chloroplast
Ss dna circular
RNA
Pentose sugar
In place of n2 base
Polynucleotide chain no
Exception
Ribose sugar
Thymine in dna , uracil is present in rna
Only one I.e single stranded
RNA in Reo virus is ds
2 polynucleotide chains
Enzymes
Nuclei acid enzyme
Enzyme protein structure
Pocket or =
Ribozymes
Primary, secondary, tertiary structure
Or crevices = in tertiary structure the backbone of protein chain folds upon itself, the chain criss - crosses itself
Active site
Enzymes through their active site
Different to inorganic catalyse
Exception
One pocket is the active site
An active site of an enzyme is a cervice or pocket i n. To which substrate fits
Catalyse reactions at high rate
Enzyme get. Damaged at high temperature [ above 40°C]
Organisms who normally live under extremely high temperature eg hot vents & sulpher springs [ up to 80ª 90°C)
Organic chemical reaction eg
Rate of physical / chemical reaction =
Rate double or decreases
Enzyme not used in carbonic acid molecules formed
Used then
Hydrolysis of starch into glucose
Amount of product formed per unit time
By half for every 10°C change in either direction
200molecules
600000 molecules
Metabolic pathway
In different conditions
What refers to a reaction
Substrate
A multistor chemical reaction when each of steps is catalysed by same enzyme complex or different enzyme
Different products are possible
The chemical or metabolic conversion
The chemical in which it is converted into a product is called
S →P meaning
ES complex is
Transition state
Stability is related to
Enzymes i. e protein with 3 dimensional structure including an active site convert substrate
An obligatory formation
During the state where substrate is bound to enzyme active site a new structure of substrate is formed
To energy status of molecule or structure
Concept of activation energy graph
Y axis represents
X axis
P < S then reaction is
Whatever reaction it is
Represents the potential energy content
The progression of structural transformation or states through the transition state
An exothermic reaction [ energy supply is not needed ]
S has to go through a much higher energy state or transition state
Activation energy
Enzyme- substrate complex ES is
Essential
The difference in average energy content of S from that of this transition state
Is short-lived and dissociates into its products and the unchanged enzyme with an intermediate formation of enzyme product complex
For formation of catalysis
Range of temp , pH for fn of enzyme
Optimum temp, optimum pH
Low temp
High temp
Narrow range of temp,ph
Each enzyme show its highest activity at a particulco temp, ph
Provides the enzyme in a temporarily inactive state
Destroys enzymatic activity because proteins are denaterated by heat
V max is because
Inhibition
Competitive inhibitor
The enzyme molecules are fewer than the substrate molecules and after saturation, there are no free enzyme molecule to bind with additional substrate molecule
When the binding of chemical shuts off enzyme activity
In lieber closely resembles the substrate in its molecular structure and inhibits the activity of enzyme