NUCLEIC ACIDS Flashcards

(81 cards)

1
Q

isolated what he called nucleinfrom the nuclei of pus cells

A

Friedrich Miescher

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2
Q

The source of genetic information in chromosomes

A

nucleic acids

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3
Q

DNA is found in

A

Nucleus, mitochondria, chloroplasts

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4
Q

Nucleotides have 3 parts

A

5-carbon sugar (pentose)
nitrogen containing base (CHN)
Phosphate group

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5
Q

double ringed structure

A

purine
(adenine and guanine)

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6
Q

single ring

A

pyramidine
(cytosine and thymine)

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7
Q

no O atom on carbon 2’.

A

DNA

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8
Q

Nucleoside=

A

Nucleoside= N base + 5-C sugar

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9
Q

nitrogen base linked by a glycosidic bond to C1’ of a sugar (ribose or deoxyribose).

A

nucleoside

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10
Q

named by changing the nitrogen base ending to
___ purines
____ pyramidines

A

-osine
-idine

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11
Q

−OH on C5’ of a sugar bonds to phosphoric acid

A

nucleotide

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12
Q

Nucleotide =

A

nucleoside + phosphate

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13
Q

a nucleoside that forms a phosphate ester with the C5’ –OH group of a sugar (ribose or deoxyribose).

A

nucleotide

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14
Q

Raw materials for DNA biosynthesis

A

dATP, dGTP, dCTP, dUTP

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15
Q

Raw materials for RNA biosynthesis

A

ATP, GTP, CTP, UTP

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16
Q

Secondary messengers in hormones action.

A

cAMP, cGMP

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17
Q

nucleotides are joined by

A

phosphodiester bonds

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18
Q

secondary structure of RNA

A

cloverleaf tRNA

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19
Q

What are the four loops in secondary structure

A

D loop
Anticodon loop
variable loop
T ¥ C

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20
Q

What are the four arms of secondary structure

A

amino acid arm
D arm
T¥ C arm

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21
Q

Arrange according to their percentage
tRNA
rRNA
mRNA

A

rRNA (75)
tRNA (10-15)
mRNA (5-10)

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22
Q

Ribosomes consists of
rRNA-
Proteins-

A

65
35

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23
Q

The base chain is written in the _____ direction

A

5–>3

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24
Q

A=T
G=C

what rule

A

chargaff’s rule

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25
X-ray Diffraction Refined Structure
Franklin, Wilkins
26
Adenine is alwayslinked by ____ bonds with Thymine
two H bonds
27
Guanine is always linked by ____^hydrogen with Cytosine
three
28
proposed by Watson & Crick; standardDNA structure
right handed helix
29
atlow humidity,the DNA molecule will take the
A form
30
the minimum functional unit in DNA
gene
31
short coding sequences
exons
32
a longer intervening noncoding sequence
introns
33
Between replications, the DNA is stored in a compact ball called wrapped around the protein called to form
chromatin histones nucleosomes
34
DNA & RNA specific absorption at max =
260 nm
35
The more G-C content, the ___ Tm value.
higher
36
Characteristics of DNA replication
semi conservative bidirectional semi-discontinuous synthesis
37
each daughter duplex contains one strand from the parent duplex
semi conservative
38
is first made as short chains
lagging strand (Okazaki fragments)
39
precursors of DNA replication
dNTPs
40
Unwinds DNAdouble helix
helicase
41
Catalyzessynthesis of RNA primers
Primase
42
Catalyzeschain elongation
DNA polymerase III
43
Involvedin the excision of primers and filling up of gaps
DNA polymerase I
44
Catalyzesthe formation of a phosphodiester linkage between a 3’hydroxyl at the end of one DNA strand and a 5’ phosphate at the end of another strand
DNA ligase
45
replicates DNA only 5’ to 3’
DNA polymerase III
46
one of the major post-replicative reactions.
methylation
47
Site of methylation of eukaryotic DNA is always on
cytosine
48
Transcription has 3 stages
Initiation Elongation Termination
49
stretch of 6 nucleotides
Pribnow box
50
a 2ndnucleotide sequence, TTGACA, located about 35 bases to the left of the transcription start site
-35 sequence
51
the promoter region has been recognized by the
holoenzyme
52
+ supercoil (ahead of the transcription site) –relaxed by
gyrase
53
➢-supercoil (behind) –relaxed by
topoisomerase
54
linkage of 7-methylguanosine to the 5’ terminal residue.
capping
55
attachment of an adennylate polymer (poly A, 20~250 nucleotides) at the 3’ terminal.
tailing
56
While the mRNA is still in the nucleus, the ___ are removed from the pre-RNA
introns
57
Inprokaryotes(bacteria and archebacteria), transcription of proteins is regulated by an ___
operon
58
consists of a control siteand the genes that produce mRNA for lactose enzymes
lactose operon
59
When there is no lactose in the cell, a ____ produces a _____ protein prevents the synthesis of lactose enzymes
regulatory gene repressor
60
Translation Five Stages
Activation of amino acids Initiation of translation Elongation Termination and ribosome recycling Folding and post-translational processing
61
Enzymatic synthesis of aminoacyl tRNA molecules
activation of amino acids
62
Binding of mRNA and N-formylmethionineto ribosome
initiation of translation
63
Binding of aminoacyl tRNAs to ribosome formation of peptide bonds
elongation
64
an adapter molecule, which recognizes an amino acid on one end and its corresponding codon on the other, is required for translation. This adapter molecule is
tRNA
65
have self-checking functions to prevent incorrectly paired amino acyl tRNAs from forming.
Aminoacyl tRNA synthetases
66
a sequence of amino acids in a mRNA that determine the amino acid order for the protein.
genetic code
67
3 stop codons
UUA UAG UGA
68
There are how many triplets of amino acids
61
69
First amino acid is
methionine
70
The addition of a.a to the carboxyl end of the growing polypeptide chain.
elongation
71
By each cycle the polypeptide has grown by one residue and consumed
two GTP
72
Two types of mutation
point mutation base deletion or insertion
73
Changing a single nucleotide base on the m-RNA chain
point mutation
74
The codon containing the changed base codes for the same amino acid
silent mutation
75
The change results in a new different amino acid
missense
76
The change leads to premature termination if the codon containing the changed base become a termination codon.
non-sense mutation
77
Insertion or deletion of one or two bases will alter the reading frame and this cause extensive change in the translated protein
frame shift mutation
78
What are the different mutagens?
radiation chemical mutagens
79
Disrupt DNA and RNA replication
nucleotide analogs
80
Result in base-pair substitutions and missense mutations
nucleotide-altering chemicals
81
Result in nonsense mutations
frameshift mutagens