Nutrient Sensing and mTOR Signalling Flashcards

1
Q

In what circumstances is control of mRNA translation important?

A

In cell growth and proliferation = speeds up protein synthesis to grow faster

Respond to hormones, growth factors and nutrients

Controls synthesis of specific proteins during development

Respond to stresses or energy depletion

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What happens to protein synthesis under low intracellular amino acid levels?

A

Protein synthesis is inhibited

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Why is protein synthesis inhibited under low intracellular amino acid levels?

A

Because protein synthesis is an energy demanding process and requires amino acids

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What is needed for full translation in eukaryotes?

A

5’ CAP = 7-methyl GTP

Poly A tail = role in mRNA splicing, transport, stability and translation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What impairs translation when amino acid levels are low?

A

4E-BP1 binds euk initiation factor 4E and prevents its interaction with the eIF4G protein.

This interaction blocks the formation of the eIF4F complex, which is crucial for the initiation of translation in eukaryotic cells

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What occurs to 4E-BP1 when amino acids are present?

A

4E-BP1 is phosphorylated by the mTOR pathway

This leads to euk initiation factor 4G binding eIF4E

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What does eIF4g function as?

A

Scaffold proteins that recruits other eIFs and the ribosome to the cap-moiety

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What is eIF4A function?

A

RNA helicase

Unwinds secondary structure in the 5’UTR = allowing ribosome to efficiently scan AUG start codon

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What is the TRANSLATION initiation complex?

A

Together eIF4E, 4G, and 4A = eIF4F translation initiation complex

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

How does nutrient withdrawal affect translation?

A

Inhibits eIF4E-dependent translation because 4E-BP1 blocks it

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What is the role of mTOR?

A

Nutrient sensing

When amino acids are present mTOR phosphorylates 4E-BP1 inhibiting it from blocking eIF4E = allowing protein translation to occur

mTOR phosphorylates S6K1 to activate it = results in pS6 being phosphorylated and activated

Leading to cell growth/prolifation and translational control

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What are mTOR downstream signalling targets?

A

4E-BP1 and S6K1

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

How does 4E-BP1 repress cap-depdenent translation?

A

Through impairing eIF4G ability to recruit other euk initiation factors to mRNA

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

Where was Rapamycin disovered and what properties were discovered?

A

Discovered in soil sample

Used as anti-fungal agen

Discovered Rapamycin has immunosuppressive effects (used as anti-rejection drug for transplants) AND anti-tumour effects

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What protein does Rapamycine bind to?

A

FKBP12

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What type of kinase is mTOR?

A

Serine/Threonine Kinase

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

What is mTOR master regulator of and how does it perform regulation?

A

Translational machinery via phoshporylation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

What effect does Rapamycin/FKBP12 have on mTOR?

A

Inhibits mTORC1

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

What are the components of mTORC1?

A

PRAS40 and Raptor

Deptor and mLST8

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

What are the components of mTORC2?

A

Protor, mSIN1 and Rictor

Deptor and mLST8

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

What components do mTORC1 and mTORC2 have in common?

A

Deptor and mLST8

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

What domains does mTOR have?

A

HEAT repeats

FAT = focal adhesion targeting domain

FATC

FRB = where Rapa/FKBP12 binds???

Kinase domain

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

What in the heart does mTOR regulate?

A

Angiogenesis through VEGF expression

(vascular endothelial growth factor)

24
Q

What occurs in tuberous sclerosis complex (TSC)?

A

Autosomal dominant disorder

Characterized by haratomas = benign tumours in many organs

Growths within the brain = calcify with age and become hard or sclerotic (scarred)

25
What common medical complications occur with TSC?
Epilepsy Intellectual disability Behavioural problems
26
What two TSC-deteremining genes have been identified?
TSC1 encodes HAMARTIN TSC2 encodes TUBERIN
27
What happens when hamartin and tuberin proteins bind?
Form functional tumour suppressor heterodimer
28
What does TSC1/2 regulate?
Regulate cellular growth primarily by acting as a negative regulator of the mTORC1 When TSC1 is mutated (non-functional) = larger fly eye and wing bristles When TSC1/2 overexpressed = smaller because mTOR being repressed severely
29
How does insulin affect TSC1/2 activity?
Negative regulator of TSC1/2 activity
30
What happens when either the insulin receptor or PKB is KO'd?
TSC1/2 is no longer inhibited So TSC1/2 acts to inhibit mTOR strongly Smaller cell size
31
Where are most TSC patient-derived mutations found and what are the mutations?
Mutations can result in premature stop codons which results in the loss of C-terminal regions that contains putative GAP domain Single point mutations can also be found within this GAP region
32
What do GAP and GEF stand for?
GAP = GTPase activating protein GEF = guanin exchange factor
33
What is TSC2 protein?
GTPase activating protein Hydrolysis of GTP to GDP Inhibits Rheb (small G-protein)
34
What is Rheb?
small G-protein Potential target of TSC2 GAP acitivty
35
What is the role of Rheb?
When active = activates mTOR which phoshporylates S6K1
36
What is the role of TSC1?
TSC2 only funcitons when in a dimer with TSC1 TSC1 is crutial
37
What phosphorylates TSC1/2?
Akt/PKB
38
What inhibits PI3K?
Wortmannin
39
What phophorylation sites does Akt/PKB target on TSC2?
Serine 939 Serine 981
40
Describe the cascade when insulin binds its receptor resultsing in mTOR activation
Insulin binds it receptor causing PI3K activation PI3K phosphorylates Akt/PKB which then phosphorylates inhibiting TSC2 at S939 and S981 TSC2 translocates from being associated with membrane to CYTOSOL and interacts with 14-3-3 protein Rheb is now active and associates with and turns ON mTOR mTOR phoshporylates S6K1 which then leads to pS6 phosphorylation
41
What cellular responses do amino acids participate in?
Regulate secretion (insulin/glucagon) Protein turnover Gene expression Cell Signalling (mTOR etc) Metabolism/biosynthesis (glutamte/glutamine)
42
What is System A?
A system responsible for transporting neutral amino acids into the cell
43
What does SNAT stand for?
Sodium-coupled Neutral Amino acid Transporter SNAT = family within System A
44
Where are SNAT1, 2, and 4 located?
1 = brain/heart 2 = ubiquitously expressed Transports all classical System A substrates (amino acids) 4 = liver (low level expression in muscle)
45
What activates SNAT translocation?
Regulated by many stimuli Insulin Growth factors Osmotic stress Amino acid availability
46
What happens when cells don't have enough amino acids?
Stimulation of System A activity to transport them in 1:1 ratio of imported Na+ and amino acids (SYMPORTER)
47
What is trans-inhibition in the context of System A?
When one amino acid is abundant in the extracellular space, it can inhibit the transport of other amino acids that need to be transported by the same system.
48
What is LAT1 aka SLC7A5?
L-type Amino Acid Transporter 1
49
What is the function of LAT1?
Bidirecitonal transport of large neutral branch-chain amino acids via facilitated diffusion Na+ independent transporter
50
What protein does LAT1 need to function?
Forms heterodimer with 4F2hc via disulphide bridge
51
Why does LAT1 need to form heterodimer?
Needs 4Fhc to function and translocate to plasma membrane
52
How is LAT1 associated with mTORC1?
Activates mTORC1 by providing amino acids
53
Under amino acid starvation what is the effect SESTRINS have on mTORC1 signalling?
Inhibit mTORC1
54
How does Sestrin interacting with AMPK inhibit mTORC1?
Activation of AMPK because of low amino acids in lysosome TSC1/2 activation causes GTPase acitivty inhibiting Rheb = hydrolysing any GTP
55
What effect does Sestrin have when it inhibits GATOR2?
Inhibits mTORC1 activity Inhibiting GATOR2 causes activation of GATOR1 GATOR1 activates GTPase activity keeping Rags inactive
56
What is sestrins affect on RagA-GDP?
Keps RagA-GDP in this inactive state
57