Population Genetics Flashcards

1
Q

Define probability:

A

The method for determining the likelihood of something uncertain happening.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What is the equation for P(event)?

A

P(event) = (number of times an event occurs) / (total number of observations)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

There is a 500 head cow herd.

400 are black
50 are red
50 are white

What are the probabilities for each color to occur?

A

400/500 = 0.8 black

50/500 = 0.1 red

50/500 = 0.1 white

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Probability ranges from ___ to ___.

A

0 ; 1

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What are the two types of probability?

A

Theoretical and Experimental

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What is Theoretical Probability based on?

A

The knowledge from previous experiences or events

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What is Experimental Probability based on?

A

How frequently something (actually) happens in an experiment.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

___________ confidence level = smaller confidence range =

                                   \_\_\_\_\_\_\_\_ likely to be correct!
A

Higher ; more

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Define Confidence Range:

A

How much we trust the probability to be correct

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Is a high probability but low confidence range good or bad?

A

Not good. Without a high confidence range, the probability is not as dependable.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What are the three types of (probability) events?

A

Independent
Mutually Exclusive
Joint

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What is an Independent Event?

A

The probability that one event occurs that not influenced by the occurrence of a second event.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What is a Mutually Exclusive Event?

A

The occurrence of one event precludes the occurrence of another event.
Uses OR

Ex.: male OR female

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What is a Joint Probability Event?

A

The occurrence of one or more events happening together or in sequence.
Uses AND

Ex.: A cow having twins. One is red AND one is black

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What is z?

A

A value that corresponds to a desired confidence level

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

A ____________ event will be calculated with the SUM of probabilities

A

Mutually Exclusive

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

A ____________ event will be calculated with the PRODUCT of probabilities

A

Joint probability

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

What is a Conditional Probability?

A

A measure of the probability of an event occurring, given that another event has already occurred.

19
Q

An example of conditional probability is in cats with the Manx phenotype. Having the phenotype is dependent on what occurrence happening or not happening?

A

Firstly, the cat cannot have the mm genotype, because this would kill it (lethal). Therefore, the cat must first survive, THEN show the Manx phenotype.

20
Q

Define Population Genetics:

A

The study of allele and genotype frequencies and what happens to them generation to generation.

21
Q

Who were the original founders of Theoretical Population Genetics?

A

Robert A. Fisher
Sewall Wright
J. B. S. Haldene

22
Q

What is genotypic frequency?

A

Relative frequency of a particular genotype for one locus in a population

23
Q

Define Allele (or gene) Frequency

A

Relative frequency of a particular allele in a population

24
Q

What is Relative Frequency?

A

Fraction or proportion of times a value occurs

25
Q

What does P mean population genetics?

A

The frequency of homozygous dominant genotypes. P = f(AA)

26
Q

What does H in population genetics mean?

A

The frequency of the heterozygous genotypes. H = f(Aa)

27
Q

What does Q in population genetics mean?

A

The frequency of homozygous recessive genotypes. Q = f(aa)

28
Q

P + H + Q = __________

A

ONE

29
Q

What does p stand for in population genetics?

A

p = f(A).

The frequency of the dominant allele.

30
Q

What does q mean in populations genetics?

A

q = f(a)

The frequency of the recessive allele.

31
Q

p + q = ________

A

ONE

32
Q

What are two ways to calculate p?

A

p = P + (1/2)H

p = 1 - q

33
Q

What are two ways to calculate q?

A

q = Q + (1/2)H

q = 1 - p

34
Q

Define fixation.

A

When a particular allele becomes the only locus in a population

35
Q

What are the five assumptions of the Hard-Weinberg Law?
(You should know this very well)

A

Large population
Random mating
No migration
No selection
No mutation

36
Q

Define mutation.

A

A permanent, heritable change in a DNA sequence

37
Q

Define migration.

A

Movement of breeding animals from one population to another

38
Q

Is the use of AI (artificial insemination) and embryo transfer considered migration?

A

YES

39
Q

What are the two mating strategies?

A

Random and Non-random

40
Q

Define random mating

A

Each breeding animal has an equal opportunity to breed

41
Q

What are the two types of non-random mating?

A

Positive assortative and negative assortative

42
Q

___________ mating is between organisms with similar phenotypes

A

Positive assortative

43
Q

Negative assortative ___________ is between organisms with __________ phenotypes

A

mating ; different