Studies - Authors, Years and Facts Flashcards by Aislinn Cottage

Darwin’s finches study (big bird)

Author and year

Lamichhaney et al. (2018)

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Arrival year of G. conirostris

1981

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Snail phenotypic plasticity

Author and year

Genner et al. (2008)

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First paper that came out showing you can measure natural selection

Lande and Arnold (1983)

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Geospiza fortis variation in beak morphology paper

Author and year

Boag and Grant (1981)

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G. fortis shift to larger beak year

1977-1978

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G. fortis shift to smaller beak year

2004-2005

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G. fortis paper looking at selection differentials

Grant and Grant (2006)

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Selection gradients in the wild paper

Hoesktra et al. (2001)

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3 spined sticklebacks parallel adaptation

Author and year

Boughman et al (2005)

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Genomic footprint bird study

Author and year

Nadeau et al (2007)

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Genomic footprint bird study gene involved

Mc1R

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Criteria of an adaptive radiation

Author and year

Schluter (2000)

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Lupin adaptive radiation phylogeny

Author and year

Hughes and Eastwood (2006)

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Lupin adaptive radiation - loci phylogeny based on

ITS

CYCLOIDEA

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Lupin adaptive radiation more recent study

Nevado et al (2016)

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Lupid adaptive radiation % genes under selection in North America vs Andes

NA - 20%

A - 35%

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Hawaiian honeycreepers adaptive radiation phylogeny

Author and year

Lerner et al (2011)

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Hawaiian honeycreepers adaptive radiation populations and ranges
Author and year

Paxton et al (2016)

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Cichlid adaptive radiation

Author and year

Brawand (2014)

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Lark buntings

Author and year

Chaine and Lyon (2008)

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Bighorn sheep artificial selection

Author and year

Coltman et al (2003)

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Original guppy study

Author and year

Reznick and Endler (1982)

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2nd guppy study

Author and year

Reznick et al (1996)

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3rd guppy study | Author and year

Gordon et al (2009)

Locations used in 2nd and 3rd guppy study | And whether had guppies naturally present or absent

Yarra - present | Damier - absent

Timema stick insect study | Author and year

Nosil and Crepsi (2006)

Competition mediated selection Anolis study | Author and year

Calsbeek and Cox (2010)

Competition mediated selection Anolis survivorship with no predators

40%

Pupfish competition mediated seletion | Author and year

Martin and Wainwright (2013)

Snail parasite study | Author and year

Lively (1989)

Snail parasite study with hybrid | Author and year

Lively and Dybdhal (2000)

Parasites and invasive species study | Author and year

Torchin et al (2003)

Turks and Caicos anole hurricane dates

Hurricane Irma - 8th Sept 2017 | Hurricane Maria - 22nd Sept 2017

Turks and Caicos anole study | Author and year

Donihue et al (2018)

Centrarchids tempo of hybrid inviability study | Author and year

Bolnick and Near (2005)

General model of ecological speciation Timema study | Author and year

Nosil et al (2002)

Apple maggot fly study - fruit odour | Author and year

Linn et al (2003)

Apple maggot fly study - when on the wing | Author and year

Filchak et al (2000)

Overlap in on the wing periods of apple maggot fly

4 weeks

% apple maggot flies on wrong plant per year

Lord Howe island palms reproductive phenology | Author and year

Savolainen et al (2006)

Cichlid sympatric speciation | Author and study

Malinsky et al (2015)

Cichlid sympactric speciation | Lake

Lake Massoko

Cichlid sympactric speciation | River they came / split off from

Mbaka river

``` Cichlid sympactric speciation Initial colonisation (ya) ```

10,000-20,000 ya

Cichlid sympactric speciation | Divergence (ya)

1,000 ya

Cichlid sympatric speciation pattern consistent with study | Author, year and species

Poelstra et al (2014) | Corvus

Cichlid sympatric speciation pattern differs from study | Author, year and species

Soria-Carrasco et al (2014) | Timema

Study looking at worldwide diversity in humans | Author and year

1000 Genomes Project Consortium (2015)

Study looking at worldwide diversity in humans | Maximum variation in genome within a population

5 million variant sites

Human adaptation in space - Europeans vs Inuits | Author and year

Fumagalli et al (2015)

Human adaptation in space - Europeans vs Inuits | Genes varying

FADS1-3 WARS2 TBX15

Human adaptation in time | Author and year

Mathieson et al (2015)

Human adaptation in time | Number of loci showing strong selection

Review of human adaptation studies | Author and year

Fan et al (2016)

Beak morphology of Darwin's finches - genomic methods | Authors and years

Almen et al (2016) | Lamichhaney et al (2015)

Beak morphology of Darwin's finches - genomic methods | Gene under selection

HMGA2

Tasmanian devil cancer | Author and year

Epstein et al (2016)

Tasmanian devil cancer | Candidate chromosomes

2 and 3

Peppered moths | Author and year

van't Hof et al (2016)

Peppered moths | Gene

Cortex

Pond skaters | Author and year

Santos et al (2017)

Great tits feeding | Author and year

Bosse et al (2017)

Great tits feeding | Gene

COL4A5

Galapagos finches skeletal development | Author and year

Abzhanov et al (2004)

Galapagos finches skeletal development | Gene

Bmp4

Cichlid fish wide vs narrow jaw | Author and year

Albertson et al (2005)

Cichlid fish wide vs narrow jaw | Gene and how much variation it explained

Bmp4 | 10-15%

Sticklebacks - standing genetic variation - F2 hybrid | Author and year

Colosimo et al (2005)

Sticklebacks - standing genetic variation | Which locus within which gene?

Locus - Stn365 | Gene - Eda

Sticklebacks - standing genetic variation - transplant experiment Author and year

Barrett et al (2008)

Sticklebacks - standing genetic variation - benefit of lack of armour and parallel evolution Author and year

Barrett et al (2009)

Sticklebacks - standing genetic variation - sequencing genes from different locations Author and year

Colosimo et al (2005)

Sticklebacks - standing genetic variation - whole genome sequencing Author and year

Jones et al (2012)

Sticklebacks - additive effects of multiple genes | Author and year

Arnegard et al (2014)

Florida beach mice - additive effects of multiple genes | Author and year

Vignieri et al (2010)

Florida beach mice - additive effects of multiple genes | Gene

Mc1r

Florida beach mice - additive effects of multiple genes | Amount of variation explained by gene in crosses

36%

Florida beach mice - additive effects of multiple genes - expansion to different areas Author and year

Hoekstra et al (2006)

Florida beach mice - additive effects of multiple genes - expansion to different areas Gene

Agouti

Florida beach mice - additive effects of multiple genes - interaction between genes Author and year

Steiner et al (2007)

Florida beach mice - additive effects of multiple genes - cline of colour Author and year

Mullen and Hoekstra (2008)

Florida beach mice - additive effects of multiple genes - cline of alleles Author and year

Steiner et al (2007)

Mc1r white sand lizards | Author and year

Rosenblum et al (2010)

Mc1r flycatchers -pleiotrophic effects | Author and year

Uy et al (2009)

Process of adaptive radiation | Author and year

Yoder et al (2010)

Process of adaptive radiation | Steps

``` Source of ecological opportunity Release from natural selection Ecological release Rapid speciation and morphological diversification Adaptive radiation ```

Teleost antagonist release | Author and year

Friedman (2010)

Lizard density compensation | Author and year

Buckley and Jetz (2007)

Stickleback density compensation | Author and year

Bolnick (2004)

Appalachian salamander ecological character displacement | Author and year

Adams (2004)

Ecological character displacement rarely demonstrated in nature Author and year

Stuart and Losos (2013)

Ecological character displacement rarely demonstrated in nature % cases

4% cases

Tinkerbird reproductive character displacement | Author and year

Kirschel et al (2009)

Adaptive radiation in the lab | Author and year

Rainey and Travisano (1998)

Adaptive radiation in the lab - niche occupation | Author and year

Brockhurst et al (2007)

Adaptive radiation in the lab - predation-mediated divergence Author and year

Meyer and Kassen (2007)

Adaptive radiation in the lab - parasite-mediated divergence | Author and year

Buckling and Rainey (2002)

Adaptive radiation in the lab - does adaptation limit diversification? Author and year

Buckling et al (2003)

Genetic and ecological interactions at many loci - hybrid zones Author and year

Barton et al (1989)

Florida mice - clines of different aspects of phenotype | Author and year

Mullen and Hoekstra (2008)

Bombina toad - hybrid incompatibilities | Author and year

Nurnberger et al (1995)

Bombina behaviour affecting variation | Author and year

MacCallum et al (1998)

Chorthippus assortative mating HZ | Author and year

Bridle and Butlin (2002)

Littorina gene flow | Author and year

Westram et al (2018)

Sorex shrews modification | Author and year

Hatfield et al (1992)

North american sunflowers - speciation by hybridisation | Author and year

Reiseberg (1991)

North american sunflowers - crossing parental forms | Author and year

Reiseberg et al (2003)

North american sunflowers - genomics | Authors and years

Reiseberg et al (1996) | Reiseberg (2001)

Heliconius recombination | Author and year

Martin et al (2016)

Recombination rates and breakpoint positions may be heritable Author and year

Johnson et al (2018)

Phylogeny of Denisovan hominin | Author and year

Krause et al (2010)

Phylogeny Denisovans and Melanesians | Author and year

Reich et al (2010)

Phylogeny Denisovans and Melanesians | % DNA shared

Recent human history | Author and year

Rasmussen et al (2011)

Tree imbalance by change | Author and year

Slowinski and Guyer (1989)

Tree imbalance and null models | Author and year

Guyer and Slowinski (1991)

Imbalance of the tree of life and the great speciators | Author and year

Alfaro et al (2009)

Prediciting radiation via species selection - cichlids | Author and year

Wagner et al (2012)

Ciliate competitive exclusion and phylogenetic distance | Author and year

Violle et al (2011)

Phylogenetic structure of communities | Author and year

Cooper et al (2008)

Phylogenetic structure of communities - hummingbirds | Author and year

Graham et al (2009)

Phylogenetic structure of communities - hummingbirds | % phylogenetically clustered

71%

Anolis lizard ecomorph evolution | Author and year

Losos et al (1998)

Overcoming niche conservatism - Hawiian Lobeliads | Author and year

Givnish et al (2008)

Phylogenetics and speciation - looking at the tempo of diversification Author and year

Barraclough and Nee (2001)

Gamma parameter to look at variation in rate of diversification in mammals Author and year

Meredith et al (2011)

Rates of character evolution in mammals | Author and year

Close et al (2015)

Natural history of seaborne | Author and year

Gilbert White (1789)

No blind watchmaker | Author and year

William Paley (1802)

Structural changes | Author and year

Hoekstra and Coyne (2007)

Structural change examples - Florida beach mice | Author

Hoekstra et al

Regulator change - Ugandan melanogaster pigmentation | Author and year

Rebiez et al (2009)

Regulator change - Ugandan melanogaster pigmentation | Gene

ebony

Regulator change - fly bristles | Author

Simpson et al

Regulator change - fly bristles | Gene

scute

Structural vs cis-regulatory in inter and intraspecific | Author and year

Stern (2009)

Species tree vs gene tree looking at echolocation - dolphins and bats Author and year

Parker et al (2013)

Genetic basis of difference in Mullerian mimicry rings | Author and year

Nadeau et al (2011)

Long-term responses to artificial and sustained selection | Authors and years

Robertson (1930s) Weiber (1980s) Review - Barton and Keighley (2002)

Constraint to adaptation by trait correlations | Author and year

Etterson and Shaw (2001)

Microscope analogy | Author and year

Fisher (1930)

Multidimensional traits evolution | Author and year

Orr (1998)

Genes of large or small effects - QTL studies | Authors and years

Visscher (2008) | Rockman (2011)

Why adaptation at the edge of a range / limited species ranges? Authors and years

Haldane (1956) | Kirkpatrick and Barton (1997)

Asymmetrical migration prevents local adaptation? | Author and year

Bridle and Vines (2007)

The behaviour of genes and genotypes affects how alleles experience the environment Author and year

Nadeau, Urban, Bridle (2017)

The extended phenotype | Author and year

Dawkins (1982)

Spider extended phenotype | Author and year

Blackledge and Gillespie (2004)

Testing how brains affect behaviour - cichlids | Author and year

Hauber et al (1997)

Testing how brains affect behaviour - cichlids - gene networks Author and year

Sylvester et al (2010)

Testing how brains affect behaviour - cichlids - gene networks Genes

Habitat preference - wnt1 Rostral brain length - stg10 ZLI - stg11

Sociogenomics (diagram) | Author and year

Robinson et al (2008)

Cichlid sociogenomics - dominance and genes | Author and year

Burmeister et al (2005)

Cichlid sociogenomics - dominance change | Author and year

Maruska and Fernald (2010)

Cichlid sociogenomics - dominance and genes | Gene

Egr-1

Cichlid sociogenomics - dominance microarray | Author and year

Renn et al (2008)

Swordtails sociogenomics | Author and year

Cummings et al (2008)

Wasp sociogenomics | Author and year

Toth et al (2010)

Natural selection driving habitat specific gene expression - Atlantic killifish Author and year

Whitehead and Crawford (2006)

Euphydryas butterflies - responding to microclimates | Author and year

Singer (2015)

Lake Baikal sculpin - visual ecology | Author and year

Bowmaker and Hunt (2006)

Lake Baikal sculpin - visual ecology | Opsin sequenced

Rh1

African cichlid - visual ecology | Author and year

Sugawara et al (2005)

African cichlid - visual ecology - regulation of gene expression Author and year

Hoffmann et al (2009)

Convergence of olfaction in mammals | Author and year

Hayden et al (2010)

``` Sensory drive (diagram) Author and year ```

Endler (1992)

Stickleback sensory drive | Author and year

Boughman et al (2001)

Amazonian bird sensory drive | Author and year

Tobias et al (2010)

12 years to prevent catastrophic climate breakdown | Authors and years

WWF Living Planet Report (2018) | IPCC (UN) report on climate change (2018)

Drosophila latitudinal clines | Author and year

Umina et al (2005)

Drosophila latitudinal clines | Genes

Adh^s | In(3r)Payne

Drosophila latitudinal clines | % difference in body size explained by climate genes

30%

Field mustard climate change | Author and year

Franks et al (2007)

Widespread poleward and elevational movement of many species | Author and year

Parmesan (1999)

Ecological patchiness limits range shifts in response to climate change Author

Thomas et al

Silver studded blue patch distribution | Author and year

Warren et al (2001)

UK brown Argus climate change | Authors and years

Pateman et al (2012) | Buckley, Butlin, Bridle (2012)

UK brown Argus climate change - evolutionary response | Author and year

Buckley et al (2012)

UK brown Argus climate change - estimates of within-locus probability of selection using Bayescan Author and year

Foll and Gaggiotti (2008)

UK brown Argus climate change - reciprocal transplants | Authors and years

Bridle et al (2014) | Buckley and Bridle (2014)

Stickleback anthropogenic change and hybridisation | Author and year

Taylor et al (2006)

Coregonid whitefish anthropogenic change and hybridisation | Author and year

Vonlanthen et al (2012)

Blackcap anthropogenic change and speciation | Author and year

Rolshausen et al (2009)

Studies - Authors, Years and Facts Flashcards

(185 cards)