T-cell Maturation Flashcards

1
Q

Compare antibody: antigen binding to t-cellR: antigen binding.

A

Antibodies: bind epitopes on proteins, carbs or lipids on surface of bacteria, viruses, parasites T-cells. Can bind more than one antigen (2-5 (IgM pentamer))

T-cells: bind peptide antigens from pathogen proteins presented on MHC. TCR binds 1 antigen.

both have 3 CDR domains on V region= hypervariable domains for Ag specificity.

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2
Q

Why don’t T-cell Receptors under somatic hypermutaiton or switching?

A

T-cell receptors are **ONLY RECEPTORS. **Antibodies are both recognition and effector molecules.

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3
Q

T-Cell receptor classes

A

Alpha-beta

gamma-delta

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4
Q

T- cell receptor strucure (alpha-beta t-cell)

A
  • TCR alpha chain- variable domain (ag spec) and constant domain
  • TCR beta chain- variable domain (Ag spec) and constant domain
  • Both chains have transmembrane region with cytoplasmic tail
    *
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5
Q

Regions on different TCR chains

A

β/γ= V, D, J, C regions (like heavy chain of Ab)

α/δ= V, J, C regions ( like light chain of Ab)

Remember: α:β T cells (~90%)>>> γ:δ T-cells

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6
Q

What transmits the signals into the T-cell when an antigen binds the TCR?

A

CD3 chains. (epsilon: delta), (epsilon: gamma) dimers. Maybe more about this later?

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7
Q

TCR development? Where does this happen?

A

THYMUS

  1. Alpha/ Delta: VJ recombination then splicing to make VJC
  2. beta/gamma: DJ recombination ==> VDJ recombination then splicing.

Pretty similar to antibodies. Uses RSS (recombination signal sequence 12/23bp spacers) and RAG complex

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8
Q

RAG complex (review!)

A

RAG cleaves recombination signal sequences to make DNA hairpin which is then cleaved. TdT randomly adds nucleotides (increased diversity) between the DJ segments.

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9
Q

TCR complex

A

TCR complex= TCR + CD3 Complex + 2 zeta chains

CD3 complex= CDepsilon (x2), CDgamma, CDdelta, z

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10
Q

T-Cell development (from bone marrow–> TCR rearrangment)

A
  1. CD34+ cell ==> thymus (T-cell progenitor, no t-cell markers/receptors)
  2. +++IL-7 ==> CD2+, CD8-, CD4- = double negative thymocyte
  3. Notch1 (on thymocyte) binds receptor on thymic epithelium==> Notch1 intracellular domain removes inhibition of transcription in nucleus
  4. beta, gamma, delta rearrangement begins (it’s a race!)
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11
Q

T-cell differentiation REQUIRES

A

**IL-7 and Notch-1. **

Notch1 is equivalent to Pax-5 in B-cell development

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12
Q

How does the t-cell receptor decide what subunits it has?

A

beta, gamma and delta all compete. If delta and gamma win (successfully recombine first), then TCR is gamma/delta without any CD4/CD8.

If beta recombines first, recombination stops. Proliferation of cell and formation of DP thymocyte (CD4+, CD8+). Then alpha competes with gamma delta. If gamma/delta win, it’s gamma/delta. If alpha wins delta is cut out (via recomb process)= committed to alpha/beta. (it’s double positive)

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13
Q

Alpha chain rearrangement

A
  • VJ joining= removal of delta chain locus
  • Lots of changce to make productive rearrangement
  • Productive rearrangment in one chromosome DOES NOT inhibit rearrangemnt of alpha chain in the other chromosome
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14
Q

Beta chain rearrangment

A
  • D+J, DJ + V, DJV + C
  • 2 chances because there are only 2 C domains
  • Successful beta chain rearrangement INHIBITS rearrangement of beta chain in other chromosome
  • When successful, Beta chain goes to the ER and if it successfully binds pTalpha (alpha chain surrogate), then it gets CD3 complex and moves to membrane
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15
Q
  1. Most gamma/delta Tcells don’t express?
  2. What is the function of gamma/delta t-cells?
A
  1. CD4 or CD8
  2. antibacteria/viral/tumor functions–recognize unusual antigens:
  • E4-HMB-PP= found in pathogenic bacteria (mycobacteria, malaria parasites)
  • transformed host cell MHC1b
  • HSP (heat shock protein), superantigens

Does not require antigen presentation/MHC to do it’s job.

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16
Q

CD4 vs CD8 cell functions

A
  • CD4+ binds MHCII and regulates (activation or repression) macrophges, b-cells, etc
  • CD8+ bind MHCI cells infected with intracellular pathogens and kills them
17
Q

CD8+ structure

A

alpha-beta heterodimer

18
Q

CD4+ structure

A

single chain made of D4,D3,D2,D1 subunits

19
Q

Are CD4+ more common, or CD8+?

A

CD4>>CD8

20
Q

Double positive thymocyte…Now what?

A
  1. Positive selection in the cortex of the thymus
  2. Negative selection in the medulla
21
Q

Positive selection

A
  • TCR that are double positive need to recognize MHC I or MHC II (on thymic epithelial cells) within 3-4 days or they die (apoptosis)
  • alpha chain rearrangement can occur during this time to enhance chances of MHC binding
  • Once TCR binds MHC successfully, RAG is degraded (ie no more recombination)
22
Q

T-cells: can they have more than 1 type of TCR?

A

Technically, yes. Since alpha chain recombination doesn’t inhibit other alpha chain recombination, it’s possible. But the chances of even making it through the thymus are 1-2%, so it’s unlikely that the cell will be able to find antigens to BOTH recepots. So, usually T-cells are considered to have 1 TCR that binds 1 antigen

23
Q

negative T-cell selection

A

After positive selection, the SP (single positive) t-cell moves into the medulla of the thymus. Interaction with dendritic cells and macrophages presenting self-antigen==>apoptososis.

2% of cells survive all this shit.

24
Q

Lots of MHC molecules means that?

A
  • “arithmetic” increased in number of cells surviving positive selection (xN)
  • “geometrical” increase in number of cells failing at negative selection (xN2)
  • So, I guess the magic number is 13.
25
Q

Things needed to increased diversity of t-cell receptors?

A

TdT and RAG1/2.

26
Q

FoxP3

A

“master regulator” of T-Reg cells.

According to Wiki:

down regulation= increased tumors

27
Q

All t-cells are positive for?

A

**TCR, CD2, CD3, CD28 **

(TCR + CD3= TCR complex)