T cells Flashcards

(68 cards)

1
Q

What is the Signal 3 in T cells?

A

It is the differentiation of the t cells which is done by the release of specific cytokines

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2
Q

The proliferation of T cells is done by which cytokines? Name the 3 categories of differentiation

A
  • IL-2
    1. C4+ helper T cells
    2. CD8+ T cells - CTLs (cytotoxic T lymphocytes)
    3. Regulatory T cells
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3
Q

Characteristics of Effector T cells

A

They have been activated and differentiated

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4
Q

Classification of T cells depends on:

A
  1. Transcription factors they express
  2. Profile of cytokines they make
  3. Main function in the adaptive immunity
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5
Q

What do Effector T cells require to act?

A

They do not require co-stimulation since they will act upon meeting their MHC I on specific cells

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6
Q

Describe polarizing cytokines

A

-Polarizing cytokines are the cytokines excreted from Signal 3 of T cells that help for differentiation.
-These cytokines are specific to an effector T cell upon activation.

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7
Q

The chronology of T cell activation

A
  1. APCs bind PAMPs via PRRs
  2. Induction of Signals 1 and 2
  3. Release of polarizing cytokines (Signal 3)- the type of cytokines secreted will depend on the PAMP that has been detected
  4. The polarizing cytokines will bind to their receptor
  5. The binding between the cytokine and their receptor will induce the phosphorylation of STAT proteins- The STAT protein will act as a transcription factor
  6. The STAT protein will transcribe a **Master Transcriptional Regulator **
  7. The Master Transcriptional Regulator will bind response elements on promoter region of genes coding for certain effector proteins specific to the type of T cell
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8
Q

Name the polarizing cytokines for each T helper?

A

Th17: IL-6, IL-23 and TGF-beta
Th1: IFN- gamma and IL-12
Th2: IL-4
Tfh: IL-6
Treg: IL-2 and TGF-beta

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9
Q

Name the transcription factors of each T helper

A

Th1: -
Th2: STAT 6
Th17: STAT 3
Tfh: STAT 3
Treg: STAT 5

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10
Q

What is the master transcriptional regulator of each T helper

A

Th1: T-bet
Th2: GATA3
Th17: ROR gamma T
Tfh: Bcl-6
Treg: FoxP3

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11
Q

What are the main effector cytokines of each T helper

A

Th1: IFN-gamma and TNF
Th2: IL-4, IL-5 and IL-13
Th17: IL-17(IL-17A and IL-17F), IL-22
Tfh: IL-4 and IL-21
Treg: IL-10 and TGF-beta (anti-inflammatory effects)

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12
Q

What is the main function of the T helpers mentioned in class

A

Th1:Combats intracellular pathogens, activates macrophages (classical pathway-M1)
Th2: Combats Helminth infection, activates eosinophils
Th17: combats extracellular pathogens (bacteria and fungi)
Tfh: Regulates affinity maturation of germinal center B cells in the lymph node
Treg: Supress immune responses, specifically maintain immune tolerance to self-antigens

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13
Q

What role do these T helpers play in disease ?

A

Th1: Tissue inflammation
Th2 : Allergy
Th17: Autoimmunity, Tissue inflammation
Tfh: -
Treg: Inhibits antitumor response

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14
Q

Name the two ligands that are important to CTLs

A

FasL and CD40L

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15
Q

Name the 3 mechanisms used by CTLs for apoptosis

A
  1. Fas-FasL
  2. Granules
  3. Cytokines
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16
Q

How do CD4+ T cells help with the stimulation in the activation of CD8 cells?

A

They help CD8+ cells by giving more co-stimulation through the CD40 signaling as CD8+ cells require a lot of stimulation during activation

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17
Q

Name the characteristics of all the killing pathways used by CTLs

A
  1. Fas-FasL (Slow-acting mechanism)
    • effector CTL expresses FasL, the infected cell express Fas
    • The interaction of Fas-FasL leads to a signaling cascade involving the cleavage of pro-caspases, the caspases formed will lead to the death of the cell.
    FasL-Fas -> FADD-> Pro-caspase-8 -> Caspase-8 -> Procaspase-3 and Procaspase 7 -> Caspase-3 and Caspase-7-> Activation of pro-apostotic enzymes-> Apoptosis
  2. Granules- Perforin/Granzyme (Fast-acting mechanism)
    • CTL makes contact to target cell via nonspecific adhesion
    • Specific recognition via TCR: pMHC
    • Reorganization of the cytoskeleton and cytoplasmic contents, where the granules will be at the point of contact
    • Granules are released at the point of cell contact
    • The content is delivered through pore forming which is done by Perforin
  3. Cytokines release

• CTLs can secrete IFN gamma (Type II IFN)
• IFN gamma can increase MHC I expression in neighboring cells, activate macrophages and stimulate the production of chemokines that can recruit additional macrophages and CD8+ T cells to sites of infection

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18
Q

Name the two options given to APCs when activating CD8+

A

The APCs have two ways to activate CD8+ cells:
1. Direct interaction
- Occurs rarely, they can activate CD8+ cells due to their high co-stimulatory activity. Occurs rarely since viruses have host specificity

  1. With Licensing (REQUIRES CD4+ cells)

A. The SEQUENTIAL way (One by one, methodical)

the APC will be presented to the CD4+ effector cell, then once it gets licensed, the APC can then interact with the CD8+ T cell to make a CTL or Memory cells

B. The SIMULTANEOUS way

This way is characterized by the fact that the APC will interact with both the CD4 effector (for the licensing) and the CD8+ (for activation) AT THE SAME TIME
in the simultaneous pathway, the IL-2 is secreted by both the CD8 and the CD4 T cells to induce the proliferation of the CD8+ T cell

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19
Q

Name the signals required for the activation of CD8+ cells

A

• Signal 1- TCR binds peptide presented by APC on MHC class I
• Signal 2- Costimulatory signal transmitted by CD28-B7 (CD80/86) interaction between the T cells and APC
• Signal 3- provided mainly by IL-2 and other cytokines to some extent (IL-12), inducing proliferation

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20
Q

What is the main function of CD8+ cells and what are their specificity during activation

A

Specificities:

-CD8+ cells require more co-stimulation
- IL-2 can be autocrine and paracrine from a Th1 or Th17 cell
-They REQUIRE the help of effector CD4+ T cells

Function: Recognize and kill infected/tumor cells via recognition with their TCR

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21
Q

Characteristics of CD40L and FasL

A

The Fas ligand
• expressed on the surface of effector CD8+ cells and Th1 cells
• They are used by CD8+ T cells to exert their cytotoxic effect
• Binds Fas on the surface of infected cells in the periphery (site of infection)

The CD40 ligand
• Expressed by Th1, TH2, Th17 and Tfh cells
• It binds to CD40 on B cells and innate immune cells such as DCs
• Used to activate the cells they target
• Allows for DC licensing and expression of more co-stimulatory molecules

For BOTH: CD40 and Fas ligand are both transmembrane ligands that are part of the TNF family (Cell-to-cell interaction)
NOT expressed on Naive T cells

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22
Q

Give the sequence of the signals leading to the activation of CD8+

A
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23
Q

When can activated DCs can transfer the captures antigen to the resident DCs

A

This can happen if the antigens from the viruses rapidly kill the dendritic cells

If cDCs are absent, tissue-resident macrophages with DC morphology (LCs) are responsible for initial uptake and transport and can then transfer the antigen
These are rare events, this is NOT the norm

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24
Q

Explain the sequence of events that occurs for the Granule pathway. What enzymes come in play?

A

1.recognition through the TCR:pMHC,
2. the intracellular signalling is triggered
3. reorganization of the intracellular structure
4. Granule release. Perforin forms pore while GRANZYME B enters the cytoplasm of the target cell.
5. Granzyme B enters the cytoplasm, it will initiate signaling through pro-caspase cleavage into caspases and other factors leading to DNA fragmentation and cell death

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25
Who are the main players in a viral infection?
• Type I IFN (alpha/beta) are important anti-viral cytokines, they can inhibit or slow viral replication • Natural Killer Cells recognize and kill infected cells and tumor cells by their absence of MHC class I • Virus-specific CTLs directly kill infected cells
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What is the difference between Type II and Type I IFN?
Type II: plays a role in the immune response against intracellular pathogens, it is mainly secreted by T cells Type I: potent antiviral effects and they are an effect of PRR activation
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How does the immune system know which T cells to use during an infection?
It will based itself off the nature of the infection After that, the cell- mediated response is dominated by one of the T cell subsets
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The main points of Cross-regulation
- Cross-regulation is the control between two or more effects by the release of substances and their concentration EX: TH1/TH2 cross regulation • Master transcriptional regulators commit T cells to one subset or the other • T-Bet, a master transcriptional regulator, suppresses TH2 pathway gene expression • GATA3 suppresses TH1 pathway gene expression
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What do we call the Decision Point ?
The Decision Point is the balance between two subsets EX: Th17 and Treg -The key cytokine for the differentiation of the subset is TGF-beta Taking in account the beneficial outcomes of each aspects, a balance between the two subset is ideal - Normal state could favor the development of iTreg population to keep inflammation down - infection (leading to IL-6 production) would stimulate more antibacterial TH17 differentiation
30
What is Homing?
Homing is the process by which lymphocytes are directed to a specific sites to perform their functions. The consequences: • TH1, TH2 and TH17 leave the lymph node and migrate to the site of infection while TFH stays in the lymph node to activate B cells • Effector T cells express molecules that target specific tissues depending on the site of infection • Where effector T cells travel i partly determines by which lymph node they get activated
31
How do Th1 helper T cells activate macrophages?
The Th1 cell recognizes pMHC class II on the surface of the macrophage, it will then use CD40L to bind to CD40, once the connection established the Th1 will secrete IFN-gamma leading to a boost in antimicrobial activity in the macrophage due to the secretion of TNF-alpha from the macrophage
32
What is the impact of pathogens persisting in macrophages?
Some pathogens persists in macrophages, they inhibit the fusion of the phagosome and the lysosome which prevents the acidification as the lysosomal proteases cannot be activated.
33
Mains points for M1 macrophages
• MH1 macrophages = function induced in the context of Th1 and have a boost to their antimicrobial mechanisms • TFN-alpha secreted leads to autocrine signaling sending survival signal to the macrophage • CD40L binding activates macrophages and increases expression of IL-12 (part of signal 3 for Th1 cells) • TNF-alpha and IFN-gamma increase expression. Of MHC class I and II, CD40, B7 molecules, IL-12. All these molecules contribute to the further activation of of Th1 cells • IFN-gamma from CTLs can also activate M1 macrophages
34
What are the other functions of Th1 helper T cells and what is their process?
Killing infected macrophages • Can happen in case of chronically infected macrophages • Th1 cells recognize pMHC-II on infected macrophage • FasL on Th1 cell bing Fas on infected cells which triggers apoptosis • Bacteria released can be phagocytosed by freshly recruited macrophages • LT-Beta (lymphotoxin beta) is a tumor necrosis factor (TNF)-C and it helps with killing tumor or infected cells Help CD8+ T cells • Th1 cell can secrete IL-2 and stimulate CD8+ T cell proliferation and differentiation • Would occur in the secondary lymphoid organ (lymph node) • CTLs kill infected macrophages through the recognition of pMHC I Increase differentiation of monocytes in bone marrow • Th1 cells secrete IL-3 and GM-CSF, which circulate in the blood and act on precursors in the bone marrow (endocrine effect example) • GM-CSF= Granulocyte- macrophage colony-stimulating factor Change expression of adhesion molecules on neighbouring endothelium to recruit more macrophages • Th1 cells secrete cytokines that induce these changes Recruitment of macrophages by chemotaxis • Th1 cells secrete chemokines CCL2 that attract macrophages to the site of infection
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What are the consequences of a chronic infection in macrophages?
• The chronic infection often comes from bacteria (ex. M. Tuberculosis) being resistant to anti-microbial effect of macrophages • The resistance leads to the formation of a granuloma (a core of infected macrophages) - Surrounded by a layer of activated macrophages and a layer of Th1 cells - Centre often becomes necrotic. This necrotic center comes from cells dying due to a lack of oxygen and the cytotoxic effect of the activated macrophages
36
What are the other functions of Th2 effector cells and what are their specificity?
Promote cell turnover and mucous production (weep in the weep and sweep) • Il-13 can increase mucus production by goblet cells and increase turnover of epithelial tissue -> this helps the clearance of parasites bc they will have a harder time adhering to the surface Enhance worm expulsion (sweep in the weep and sweep response) • Il-13 can stimulate smooth muscle cells to contract -> can lead to worm expulsion Recruit and activate M2 macrophages • IL-4 and IL-13 are important for M2 macrophage activation • M2 macrophages = alternatively activated macrophages • M2 macrophages aid tissue repair and participate in worm killing and expulsion • M2 macrophages can form granulomas to entrap worms • M2 macrophages can also release toxic mediators directly onto the worm by antibody-dependent cell-mediated cytotoxicity (ADCC) • ADCC is the killing of antibody-coated target cells by Fc cells- Most ADCC is mediated by NK cells Eosinophil activation • IL-5 ; activates, recruits and enhances eosinophil differentiation • Eosinophils granules contain major basic protein (MBP), which can kill parasites • IL-4 and IL-13 lead to IgE generation • IgE antibodies bind antigens on parasites, eosinophils express receptors that recognize the Fc portion of the IgE, this allows eosinophils to specifically target pathogen and degranulate to kill its target Mast cell activation • Cytokines activate mast cells. Mast cells granules contain histamines and other molecules which can increase vascular permeability, intestinal motility and recruitment of inflammatory cells • IgE antibodies coat parasite, mast cells express receptors that recognize the Fc portion of IgE • Basophils: can secrete Il-4 and IL-13, can activate goblet cells, allow vasodilation. Binds to IgE and release histamines
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Dysregulation of Th2 responses are involved in?
Asthma and allergies
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How do Th2 responses help in with Helminth infections?
• Can sometimes clear the pathogen (or not leading to chronic infection) • Reduce worm burden by Weep and Sweep • Facilitates tissue repair • IgE antibodies are important or immune response against Helminths
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What is the pathway to an allergy ?
1. IgE antibodies interact with antigen 2. IgE antibodies binds to mast cells or basophils and induce degranulation • Granule contents released include histamine, proteases, chemokines • Act on surrounding tissues and cells to cause symptoms such as vasodilation, inflammation
40
How is Type 2 response connected to allergies?
• Allergens can enter the host via mucosal tissues and can induce Th2 response. • IL-4 and IL-13 can induce IgE generation • Allergies are initiated by an interaction between an IgE antibody and an allergen- which can cause rashes • Free circulating IgE is usually very low in concentration in blood serum -> hampered studies on the antibody • Healthy individuals make IgE only in response to parasitic infections
41
What is the relation between Th17 and inflammation?
- Il-17 is a pro-inflammatory cytokine (prolong inflammation can cause serious damage) • The responses of Th17 are involved in inflammatory diseases, including autoimmune diseases such as Psoriasis, Inflammatory Bowel Disease, Asthma, Rheumatoid Arthritis, Multiple Sclerosis • Therapies targeting IL-17 are currently being studied and soem have already been approved for clinical use
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What are the other functions of Th17 cells?
Induce production of antimicrobial peptides • IL-17 and Il-22 can induce epithelial cells to produce more antimicrobial peptides • Can contribute to killing/slowing replication of bacteria Increase epithelial turnover (mucosal immunity) • IL-22 increases division and shedding of epithelial cells • This can hinder bacterial growth Induces other cells to produce G-CSF • IL-17 acts on stromal and myeloid cells • These cells secrete G-CSF (Granulocyte colony-stimulating factor)(a cytokine working in an autocrine fashion) • G-CSF enters circulation and targets bone marrow precursors to differentiate into neutrophils Induce other cells to secrete chemokines • IL-17 acts on stromal and epithelial cells These cells • These cells secrete chemokines and these chemokines will attract neutrophils. The neutrophils can kill bacteria and fungi by phagocytosis, formation of NETs and release of granules (degranulation) Attracts more Th17 cells • Th17 cells secrete a chemokine that recruits additional Th17 cells resulting in the increase of the type 3 response leading of an increase of the overall effects Other effects • IL-17 can induce macrophages to secrete pro-inflammatory cytokines such as IL-beta and TNF-alpha- illustration of the impact that Th17 cells have due to their different pro-inflammatory effects
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How do we target IL-17 in therapy?
• IL-17 is targeted using monoclonal antibodies (antibody produced by a single clone of B lymphocytes) • Two ways : formation of an antibody that blocks the signaling from the IL-17 receptor - IL-17 receptor antagonist or antibody that binds to IL-17 to prevent it to interact with its receptor- Anti-IL-17 neutralizing antibodies
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How do the effector cytokines help with the function of the T cells?
• IL-21 promotes differentiation an d proliferation of B-cells • Type 1(IFN gamma), Type 2 (IL-4) and Type 3 (IL-17) will determine what type of antibodies will be form depending on the threat • TFH cells interact directly with B cells • In responses to all types of pathogens
46
What are the characteristics of Memory T cells ?
• Majority of effector T cells die (at least 90%), leaving behind antigen-specific memory T -cells • memory cells respond with heightened reactivity to a subsequent exposure to the same antigen- meaning that the immune system system will be stronger the second time it is infected (response more robust and effective)
47
After how long does the immune system contracts?
After 10-14 days
48
How do Treg cells help to end the response of the immune system?
Treg cells may also help to put an end to the response by releasing inhibitory cytokines (restoration of epithelial integrity)
49
What is clonal contraction?
Clonal contraction is the process by which the immune system stops cloning B and T cells since they are no longer needed Newly generated B and T cells are lost at the end of the primary immune response Cells die by apoptosis after the Ag is cleared
50
Name the two ways by which the cells die via apoptosis and name their characteristics
Intrinsic pathway (cell programs its own death) • Also called Death by neglect • ILR2 alpha and other cytokine receptors expression is transient (impermanent-last for a little bit) • Lack of signaling through these receptors-> absence of survival signal-> apoptosis Extrinsic pathway • Triggered by Fas-FasL • Involves CTLs • Leads to apoptosis
51
What are the characteristics of the Regulatory receptor, PD-1?
• PD-1 can be expressed on activated T cells • binds PDL-1 (expressed by many cells) and PDL-2 (on APCs during inflammation) • PD-1 signaling Dow-regulates T cell activation/proliferation and function • Marker of T cell exhaustion -> occurs in chronic diseases • Blocking PD-1 or PDL-1 or even CTLA-4 are targets of some cancer therapies
52
What are the characteristics of the Regulatory Inhibitor, CTLA-4 ?
• Down-regulates T cells activation, proliferation, survival: - CTLA-4 binds to B7.1/B7/2 with higher affinity than CD28 and shuts down signaling pathways, preventing excessive and uncontrolled immune responses • induced within 24h after activation, peaks 2-3 days post-stimulation - CTLA-4 found intracellularly-> phosphorylation allows it to be expressed on the membrane - post-translational regulation
53
How does CTLA-4 function ?
One CTLA-4 molecule can bind to two B7 molecules, binding sequesters B7 and prevents binding to CD28 In some cases, CTLA-4 can strip B7 molecules from antigen-presenting cells and remove them from APC surfaces • CD28 is expressed by naive T cells but surface expression of CTLA-4 is induced after activation of naive T cells (after receiving signal 1 and 2)- this process makes activated T cells less sensitive that naive T cells stimulation by APCs and restricting IL-2 production • Prevents overgrowth of lymphocytes
54
Name the subsets of Treg and their characteristics?
Natural • Thymus derived • Selected for high affinity for self peptides but to dampen the immune response to them • Express TCR, CD4. IL2R alpha and CTLA-4 • They are unable to provide Il-2 so they rely on other cells • Express FoxP3 Induced (adaptive) • Arise in the periphery from CD4+ T cells • express TCR, CD4, IL2R alpha and CTLA-4 • Express FoxP3 (some exceptions)
55
What are other functions of Treg?
T reg cells negatively regulate immune responses • Deplete local area f stimulating cytokines: Express IL2R alpha (CD25) chain -> sequester IL-2 • B7 sequestration by CTLA-4 - Inhibit APC activity by reducing co-stimulatory molecule expression and pro-inflammatory cytokine secretion -reduce T cell differentiation and activation • Produce immunosuppressive cytokines (IL-10 and TGF beta) • Direct kill T cells through granzymes and met
56
What is the mechanism of Treg?
• T cells are specific to peptides that are mainly dangerous non-self • Tregs are specific to pepetides that are self or are on-self -nTreg recognizes self-peptides:MHC-> arises in thymus -iTreg recognizes peptides:MHC (could be self or commensal Ag) -> arises in periphery • Majority of autoreactive T cells are deleted in the development process in the thymus • Tolerance: preventing an immune response against self-proteins • if a Treg recognizes its p:MHC on an APC-> APC presenting self-peptide • T Regs secrete cytokines that will inhibit neighbouring and potentially autoreactive T cells that recognize other self-peptide:MHC being presented by the same cell from getting activated
57
What is the role of IL-10 and TGF-beta ?
IL-10: inhibits production of Th1 and Th17 cytokines TGF-beta: inhibits T cell proliferation and inhibit the development of and function of Th1 and Th2
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Name the types of memory T cells+ their function and location
Tcm- Central memory T cells * Reside in/travel between secondary lymphoid tissues * Are rapidly reactivated by second Ag exposure * Can differentiate into several subset types depending on cytokine environment Tem- effector memory T cells * Travel to/between tertiary tissues (other tissues) * Contribute better to first line defenses-can interact with local APCs * Shift right back into effector functions on second Ag exposure-it will travel for many years within the body and will eventually die Trm- permanent residents of previously infected tissue * Respond upon reinfection * CD8+ Trm found in multiple tissues (CD4+ are harder to locate so they are harder to study)
59
The % of effector cells that die by apoptosis after pathogen is cleared +the consequence
90+ leaves behind antigen specific memory T cells
60
How can we use surface markers in memory cells?
We can use the surface markers to broadly distinguish naïve, effector and various memory T cells subset in mice
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What are some characteristics of Memory T cells?
* Less requirements for activation+ expresas unique set of receptors * Different surface adhesion molecules, costimulatory receptors * No need for strong co-stimulatory signal or cytokines- Memory T cells have large expression of CD28 * Still require ocntact with p:MHC but more sensitive to stimulation and respond more quickly * They become effector upon reactivation
62
What was the result of the experiment with the Mice and Memory T cells?
The results showed that Memory CD8+ T cells still require the help of CD4+ T cells for longevity
63
What are the Fate determinants for Memory T cells?
Cytokines (IL-7, IL-15) Notch1 Strength of antigen interaction
64
What is the impact of IL-7 and IL-7R alpha?
IL-7: Pro-survival cytokine which can lead to increased expression of Bcl-2, an apoptotic factor IL-7R alpha: Downregulation in expression during the differentiation of effector T cells. *Is required by cells destined to become memory T cells
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Where does T cell development occur?
T cell development occurs in the Thymus *Developing T cells are known as thymocytes
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What are the key elements in the anatomy and the cell types in the Thymus?
*Cortex and medulla *Cortical epithelial cells in the Cortex *Medullary epithelial cells in the medulla *Thymocytes in both Cortex and Medulla *Macrophages *Cortical DCs
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How does T cell develop in the Thymus ?
* T cell precursors enter the thymus as double negative (DN) cells, They do not express CD4 OR CD8 1. Double negative 2. Double positive (DP express both CD4 and CD8) 3. Single positive (SP-express either CD4 or CD8)
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