Test 4 Flashcards

(30 cards)

1
Q

What is the Ribosome made up of?

A

The ribosome is made of protein and RNA, and has the LSU (large subunit) and the SSU (small subunit)

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2
Q

Define Polypeptide

A

a multi protein chain

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3
Q

Name the three (relevant) types of RNA and their roles

A

tRNA - transfer RNA, nucleotide code -> AA code
rRNA - Ribosomal RNA
mRNA - Messenger RNA

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4
Q

What is aminoacyl tRNA synthetase?

A

Takes uncharged tRNA (tRNA without an amino acid) and uses ATP to bind with it

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5
Q

What is “wobble” base pairing?

A

where the last codon is “less important” and can change without changing the amino acid it codes for

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6
Q

What are the four sites on a ribosome?

A

“E” site (exit)
“P” site (peptidyl tRNA binding site)
“A” Site (Acceptor/aminoacytl tRNA binding site)

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7
Q

Outline the process of translation

A

1-SSU binds to mRNA
2- AUG initiator tRNA binds and initiates ribosome assembly
3- GTP -> GDP
4- Ribosome assembles

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8
Q

Where does Translation (most often) occur?

A

in the cytoplasm

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9
Q

Describe termination

A

Stop codon binds with a release factor, which cuts the polypeptide off and releases the tRNA before using energy to break the ribosome into recyclable parts

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10
Q

Define Gene expression

A

when a gene is being transcribed and is yielding a result

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11
Q

Define regulation

A

The change in what and how much of something cells make as a response to signals

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12
Q

Define transcription factor

A

A factor that either initiates or inhibits transcription

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13
Q

what is a factor?

A

something that influences or contributes to an outcome

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14
Q

What tells cells what to do?

A

Signals such as growth factors, energy/food, and density dependent inhibition

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15
Q

what do transcription factors do?

A

when active, they bind to the control elements on a DNA strand

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16
Q

What is the difference between a positive and negative transcription factor?

A

Positive: Activates the protein/enzyme when bound
negative: Deactivates the protein/enzyme when bound

17
Q

What is an Operon?

A

Sets of co-transcribes genes that usually have similar purposes

18
Q

Define allosteric regulation

A

the changing of a proteins shape or activity at one site though the binding of another site on the protein

19
Q

What is the relationship between glucose levels and cAMP levels?

A

Inverse. when glucose is high, cAMP is low, and vice versa

20
Q

How is gene expression in eukaryotes altered?

A

by changing the density of the chromatin

21
Q

What is euchromatin?

A

acetylated, or far apart, chromatin that is available for coding

22
Q

what is Heterochromatin?

A

unacetylated, or closely wound chromatin that is unavailable for coding

23
Q

What are the two kinds of promoters and what are their jobs

A

Enhancers- distal control elements
proximal - nearby control elements

24
Q

What is splicing?

A

splicing is the process of cutting the non-coding intron sequences out of the pre-mRNA, leaving only the exons in the mature mRNA

25
What enzyme does splicing, and what is it made of?
the spliceosome, a ribonucleoprotein that is made of proteins and RNA
26
Where does gene regulation occur?
Chromatin packing, controlling transcription start/end/etc, splicing, translation, mRNA degradation, protein degradation
27
What are three things that splicing can do?
Alternative splicing - regulated cutting to produce different mRNA products Mutually exclusive exons - Exons that can both exist, but not simultaneously Exon skipping - leaving out certain exons for a purpose
28
Name three types of substitution mutation
Silent (no effect) Missense (amino acid change) Nonsense (change to stop codon)
29
What happens when a nucleotide is added or deleted in a DNA strand?
a frameshift mutation
30
What are the two possible results of mutations?
loss of function mutations and gain of function mutations