Test 4 Flashcards

1
Q

What are lipids?

A

Organic compounds found in living organisms

  • insoluble in water
  • soluble in non polar organic solvents
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2
Q

5 roles of lipids

A
  • energy storage
  • membrane
  • emulsification
  • messenger
  • protective coating
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3
Q

Lipid that function as a energy storage

A

Triglycerides

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4
Q

Lipids that function in membranes

A
  • phospholipids
  • sphingoglycolipids
  • cholesterol
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5
Q

Lipids that function as emulsifiers

A

Bile acids

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6
Q

Lipids that function as messenger

A
  • Steroid hormones

- eicosanoids

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7
Q

Lipids that function as protective coatings

A

Biological waxes

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8
Q

Fatty acid

A

Naturally occurring monocarboxylic acid

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9
Q

How many carbons in long chain fatty acids

A

C12-C26

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10
Q

How many carbons in medium chain fatty acids

A

C6-C11

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11
Q

How many carbons in short-chain fatty acids

A

C4-C5

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12
Q

Poly unsaturated fatty acids

A

A fatty acid with a carbon chain present in which two or more carbon carbon double bonds are present
-up to 6 double bounds are found in important PUFA’s

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13
Q

Two types of unsaturated fatty acids:

A

Omega-3 fatty acid

Omega-6 fatty acid

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14
Q

Omega-3 fatty acid

A

Unsaturated with a double bond, 3 carbons from methyl at the end of the chain

  • Linolenic acid
  • fish oils
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15
Q

Omega-6 fatty acid

A

Unsaturated with a double bond, 6 carbons from methyl at the end of the chain

  • linoleic acid
  • vegetables oils
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16
Q

Linoleic acid deficiency

A
  • skin redness
  • dehydration
  • liver abnormalities
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17
Q

Essential fatty acids

A
  • needed by the body from diet source, can’t be synthesized by body
  • two most important: omega 6 and omega 3
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18
Q

Fat substitutes

A

Simplesse and olestra

  • composed of 6-8 long chain fatty acids attached by ester links to a sucrose (not glycerol) molecule
  • not broken down by intestinal tract
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19
Q

Melting point of lipids depends on:

A
  • length of carbon chain

- degree of unsaturation (# of Double bonds)

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20
Q

Triacylglycerol

types?

A
  • common name: triglyceride
  • Lipid formed by esterification of 3 fatty acids to a glycerol
  • simple & Mixed
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21
Q

Simple triglycerides

A

Three identical fatty acids are esterified

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22
Q

Mixed triglycerides

A

A trimester formed from the esterification of glycerol with more than one kind of fatty acid

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23
Q

Pure oils and fats have what appearance

A

Colorless and odorless

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24
Q

Trans fats

A

Behave like saturated fatty acids in the body

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25
Hydrogenation
- Addition of a hydrogen across double bond increases the degree of saturation - Many food products are produced by partial hydrogenation of oils and fats peanut oil+H2=Peanut butter
26
Reactions of triaglglycerols
- hydrolysis - in the body - saponification - making soap - hydrogenation - adding H2 to increase saturation - --partial hydrogenation - semi-solids, examples: pb, margarine, shortening - oxidation - breaks the carbon-carbon bonds and forms smaller molecules. Causes fats and oils to go rancid - --antioxidants added to food to prevent oxidation (vitamin E and C and BHT,BHA (synthetic))
27
Saponification
Hydrolysis in a basic solution -produce salt of fatty acid and glycerol solid soap = when NaOH used liquid soap = when KOH used
28
What is the most abundant membrane lipid
Phospholipid
29
Glycerophospholipid
Contains 2 fatty acids and phosphate group esterified to a glycerol molecule and an alcohol esterified to the phosphate group
30
How many ester linkages to glycerophospholipids have
4
31
What reactions do glycerophospholipids undergo
Hydrolysis and saponification
32
Function of glycerophospholipids
Function as components of cell membranes
33
Are glycerophospholipids polar or non polar
polar
34
Sphingophospholipids
One fatty acid, one phosphate group with an alcohol group attached to the phosphate group
35
Spingomyelins
sphingophospholipids in which the alcohol esterified to the phosphate group is choline -found in all cell membranes and are important structural components of the myelin sheath of neurons
36
Sphingoglycolipids
Contains both a fatty acid and a carbohydrate component
37
Cerebrosides
Simple sphingoglycolipids | -contain a single monosaccharide unit either glucose or galactose
38
What is lost from the myelin sheath in multiple sclerosis
Sphingomyelin
39
Gangliosides
are complex sphingoglycolipids which can contain a branched chain of up to seven monosaccharide residue -found in the gray matter of the brain as well as in the myelin sheath
40
Cholesterol
- membrane lipid - fused rings: 3, 6 carbon rings and one 5 carbon ring - important in human cell membranes, nerve tissue and brain tissue
41
Cholesterol in food
- obtained from meats, milk, and eggs | - liver synthesized cholesterol
42
Lipoproteins
-carry cholesterol in the body, combination of lipids with proteins and phospholipids
43
LDL
low density - bad cholesterol - transports cholesterol to tissues where it can be used for synthesis of membranes and steroid hormones - deposit cholesterol in the arteries in the form of plaque when cholesterol intake exceeds what is needed by tissues
44
HDL
good cholesterol - more dense than LDL, more protein present - pick up cholesterol from the tissues and carry it to the liver, where it can be converted to bile salts, which are eliminated from the body
45
A lipid panel
-blood test that measures serum lipid levels
46
Cell membrane
Lipid based structure that separates the aqueous part of the cell interior from the exterior -lipid bilayer = two layer thick structure of phospholipids and glycolipids
47
Cholesterol's role in a cell membrane
- helps regulate membrane fluidity - fused ring system does not allow rotation of fatty acid tails in the vicinity - makes the membrane rigid (acts as a plasticizer)
48
Passive transport
Substances move across a cell membrane from a high to low concentration without using energy
49
Facilitated transport
Substances move across the cell membrane from a high to low concentration with the aid of membrane proteins with turing cell energy
50
Active transport
Uses cell energy to pump membrane proteins to carry substances across the membrane from a low to high concentration
51
Emulsifer
Disperses and stabilizes water-insoluble substances as colloidal participles in an aqueous solution
52
Bild acids
Cholesterol derivative that functions as an emulsifying agent, makes lipids soluble in the digestive tract, so they can be digested and absorbed
53
Bile
Fluid containing bile acid secreted from the liver and then stored in the gallbladder
54
Bile salts
- synthesized from cholesterol in the liver - stored in gall bladder and secreted into all intestine - have polar and non polar region - help in the absorption of cholesterol into the intestinal mucosa
55
Gallstones
- formed when large amounts of cholesterol accumulate in the gallbaldder - composed of almost 100% cholesterol, with some calcium salts, fatty acids, and glycerophospholipids
56
Hormones
- messenger lipid - substances produced by a ductless gland - produced from cholesterol - include: sex hormones such as testosterone, and estrogen
57
Adrenocorticoid hormones
Produced from the adrenal glands located on top of each kidney
58
Two types of adrenocorticoid hormones
- mineralocorticoid - control balance of Na+ and K+ ions | - glucocorticoids - control glucose metabolism and counteract inflammation
59
Aldosterone
regulates electrolytes and water balance by the kidneys
60
Cortisol
Released under stress to increase blood sugar and regulate carbohydrate, fat and protein metabolism
61
Prednisone
Synthetic corticosteroid, derived from cortisone, used for reducing inflammation, treating asthma and rheumatoid arthritis
62
Eicosanoid
- oxygenated C20 fatty acid derivative that function as messengers - have profound effects at extremely low concentrations - hormone like - exert effects in the tissues where they are synthesized
63
Effect of eicosanoids
- inflammatory response - production of pain and fever - regulation of blood pressure - induction of blood clotting - reproductive functions such as induction of labor - regulation of sleep/wake cycle
64
Three types of eicosanoids
- prostaglandins - thromboxanes - leukotrienes
65
Prostaglandins
Regulates many functions in body - involved in raising body temp - inhibits secretion of gastric juices - increasing secreting of protective mucus layer into the stomach - relaxing and contracting smooth muscle, directing water/electrolyte balance, and enhancing inflammation response
66
Thromboxanes
Promote platelet aggregation (formation of blood clots)
67
Leukotrienes
Found in white blood cells, promote inflammatory and hypersensitivity responses
68
NSAID
Block production of prostaglandins thus decreasing pain, inflammation and fever
69
Biological waxes
Lipid with a monster of long chain fatty acid and a long chain alcohol
70
Properties of biological waxes
-water insoluble and water repellent
71
Function of biological waxes
- protect hair, and skin and keep it pliable and lubricated | - impart water repellency to animal fur
72
Protein
Polymer of amino acids
73
Amino acid
Molecule containing both an amine, NH2 group and a carboxylic acid -amino acid are always alpha (α) amino acid because both the carboxyl group and amine group are attached to the alpha carbon
74
Cystine
The only amino acid with a sulfhydryl group
75
nonpolar amino acid
1 amine group & 1 carboxyl group with nonpolar side chain
76
polar neutral amino acid
1 amine group & 1 carboxyl group with polar side chain, but neutral
77
polar acidic amino acid
1 amine group & 2carboxyl groups with side chain containing 2nd –COOH group
78
polar basic amino acid
2 amine groups & 1 carboxyl group with side chain containing 2nd amine group
79
essential amino acid
needed by the human body, but must come from dietary sources
80
L isomer
NH2 on the left
81
D isomer
NH2 on the right
82
Peptides
Chain of covalently linked amino acids | -covalent bonds between amino acids in a peptide are called peptide bonds
83
Dipeptide
bond between two amino acids
84
Oligopeptide
bond between ~ 10 - 20 amino acid
85
Polypeptide
bond between large number of amino acids
86
Nomenclature - AA
``` Three letter abbreviations - widely used for naming: First letter of amino acid name is compulsory and capitalized followed by next two letters not capitalized except in the case of Asparagine (Asn), Glutamine (Gln) and tryptophan (Trp) ```
87
Isomeric Peptides
Peptides that contain the same amino acids but present in different order are different molecules (constitutional isomers) with different properties
88
Small Peptides
Many relatively small peptides are biochemically active: - Hormones - Neurotransmitters - Antioxidants
89
Enkephalins
Small peptide neurotransmitters - are pentapeptide neurotransmitters produced by the brain and bind receptor within the brain - help reduce pain
90
Protein hydrolysis:
1. splits the peptide bonds to give smaller peptides and amino acids. 2. occurs in the digestion of proteins. 3. occurs in cells when amino acids are needed to synthesize new proteins and repair tissues.
91
Hydrolysis of a Dipeptide...what is required?
1. In the lab, the hydrolysis of a peptide requires acid or base, water, and heat. 2. In the body, enzymes catalyze the hydrolysis of proteins.
92
Glutathion
- small peptide antioxidants - present in high levels in most cells - regulator of oxidation/reduction reactions - antioxidant
93
Protein
A naturally-occurring, unbranched polymer, peptide in which at least 40 amino acid residues are present - Monomeric protein contains one peptide chain - Multimeric protein contains more than one peptide chain
94
Simple proteins
A protein in which only amino acid residues are present
95
Conjugated protein
A protein that has one or more non-amino acid group present in its structure -(non-amino acid components) may be organic or inorganic
96
Primary structure of protein
refers to the order in which amino acids are linked together in a protein -Insulin was the 1st to have its order of amino acids determined (51 A.A.) -Frederick Sanger (1953) sequenced and determined the primary structure for the first protein - Insulin
97
Secondary protein structure
arrangement in space (backbone portion of protein) | -alpha helix, or beta pleated sheet
98
Tertiary Protein Structure
overall 3-dimensional shape of a protein that results from the interactions between amino acid side chains (R-groups) that are widely separated from each other with in peptide chains
99
Tertiary protein structure interactions
1. Covalent disulfide bonds (strongest) 2. Electrostatic attractions or salt bridges (acidic side chain & basic side chain) 3. Hydrogen bonds (between amino acids with polar R group) 4. Hydrophobic attractions (2 nonpolar side chain)
100
Quaternary protein structure
organization among various polypeptides in multi chain protein 1. Electrostatic interaction 2. Hydrogen bonds 3. Hydrophobic interaction 4. the combination of two or more polypeptide chains. 5. stabilized by the same interactions found in tertiary structures. 6. of hemoglobin consists of two alpha chains and two beta chains with heme groups in each subunit that pick up oxygen for transport in the blood to the tissues.
101
Three types of proteins:
1. membrane 2. fibrous 3. globular
102
Membrane proteins
associated with cell membranes - insoluble in water - help in transport molecule across the membrane
103
Fibrous protein
polypeptide chains arranged in long strands or sheets (insoluble) 1. keratins - found in wool, feathers, hooves, silk, hair and fingernails 2. Collagens - found in tendons, bone and other connective tissue 3. Elastins - found in blood vessels and ligaments 4. Myosin – found in muscle fissure 5. Fibrin – found in blood clots
104
Globular protein
polypeptide chains are folded into spherical or globular proteins (soluble) 1. Insulin – regulatory hormone for controlling glucose metabolism 2. Myoglobin – involved in oxygen transport in muscles 3. Hemoglobin – involved in oxygen transport in blood 4. Transferring – involved in iron transport in blood 5. Immunogloblin – involved in immune system responses
105
Collagen
-30% of body ( must abundant protein) found in tendons, ligaments, blood vessels and skin made up of triple helices which cross-link cross-linking gives more strength (more rigid) {causes aging}
106
Hemoglobin
transports oxygen from lungs
107
Myoglobin
oxygen storage in the muscles
108
Protein Functions:
1. Catalytic 2. Defense 3. Transport 4. Messenger 5. Contractile 6. Structural 7. Transmembrane 8. Storage 9. Regulatory 10. Nutrient
109
Catalytic proteins:
Enzymes are best known for their catalytic role.
110
Defense proteins:
Immunoglobulins or antibodies are central to functioning of the body’s immune system
111
Transport proteins:
Bind small biomolecules, e.g., oxygen and other ligands, and transport them to other locations in the body and release them on demand.
112
Messenger proteins:
transmit signals to coordinate biochemical processes between different cells, tissues, and organs.
113
Contractile proteins:
Necessary for all forms of movement.
114
Structural proteins:
Confer stiffness and rigidity
115
Transmembrane proteins:
Span a cell membrane and help control the movement of small molecules and ions.
116
Storage proteins:
Bind (and store) small molecules.
117
Regulatory proteins:
Often found “embedded” in the exterior surface of cell membranes - act as sites for receptor molecules
118
Nutrient proteins:
Particularly important in the early stages of life - from embryo to infant.
119
Denaturation involves :
1. the disruption of bonds in the secondary, tertiary, and quaternary protein structures. 2. heat and organic compounds that break apart H bonds and disrupt hydrophobic interactions. 3. acids and bases that break H bonds between polar R groups and disrupt ionic bonds. 4. heavy metal ions that react with S—S bonds to form solids. 5. agitation, such as whipping, that stretches peptide chains until bonds break
120
Protein denaturation
-partial or complete disorganization of a protein’s tertiary structure -Microorganisms are killed by denaturation of proteins -Fever over 104ºF will start to denature the critical enzymes of the body -
121
Coagulase
Precipitation (denaturation of proteins) Egg white - a concentrated solution of protein albumin
122
Glycoprotein
protein that contains carbohydrates in addition to amino acid -collagen (when heated with strong base produces water soluble protein gelatin)
123
Lipoprotein
a conjugated protein that contains lipids in addition to amino acids
124
Immunoglobulin
glycoprotein molecule produced by an organism as a protective response to the invasion of microorganisms or foreign molecule
125
Antigen
foreign substance in the body bacterium or virus
126
Antibody
biochemical molecule that counteracts specific antigens
127
Enzymes
Proteins that catalyze nearly all the chemical reactions taking place in the cells of the body -increases the rate of reactions by lowering the energy of activation -most enzymes are globular proteins -enzymes under go all the reactions of proteins – including denaturation -are most active at an optimum temperature (usually 37 C in humans) -show little activity at low temperatures lose activity at high temperatures as denaturation occurs
128
Yeast
Contains an enzyme used to speed up the decomposition of glucose to produce CO2 and ethanol in bread, wine, etc.
129
Ribozyme
enzymes made of ribonucleic acid instead of protein
130
Simple enzyme
Enzyme composed only of protein (amino acid chains)
131
Conjugated enzyme
Enzyme that has non-protein and | protein parts
132
Apoenzyme
Protein part of a conjugated enzyme
133
Cofactor
Non-protein part of a conjugated enzyme (derived from dietary vitamins)
134
Holoenzyme
Biochemically active conjugated enzyme | Apoenzyme + cofactor = holoenzyme
135
Naming - enzymes
Suffix -ase identifies an enzyme | -some of the digestive enzymes have -in at the end (pepsin, trypsin and chymotrypsin)
136
Six major classes of enzymes based on type of reactions
1. oxidoreductase - oxidation reduction 2. Transferase - transfer of functional group from one molecule to another 3. Hydrolase - addition of water molecule 4. Lyase - addition or removal of a group to a double bond 5. Isomerase - rearrangement of functional group within a molecule 6. ligase - bonding together two molecules into one
137
Oxidoreductase
Oxidation and reduction reactions are always linked to one another -Lactate dehydrogenase is an oxidoreductase
138
Transferase
Two major subtypes: - Transaminases - catalyze transfer of an amino group to a substrate - Kinases - catalyze transfer of a phosphate group from adenosine triphosphate (ATP) to a substrate
139
Hydrolase
- Involves addition of a water molecule to a bond to cause bond breakage - Hydrolysis reactions are central to the process of digestion: - -Carbohydrases hydrolyze glycosidic bonds in oligo- and polysaccharides - -Proteases effect the breaking of peptide linkages in proteins - -Lipases effect the breaking of ester linkages in triacylglycerols
140
Lyase
- Dehydratase: effects the removal of the components of water from a double bond - Hydratase: effects the addition of the components of water to a double bonds
141
Isomerase
Is an enzyme that catalyzes the isomerization (rearrangement of atoms) reactions.
142
Ligase
Is an enzyme that catalyzes the formation of a bond between two molecules involving ATP hydrolysis: - ATP hydrolysis is required because such reactions are energetically unfavorable - Require the simultaneous input of energy obtained by a hydrolysis of ATP to ADP
143
Substrate
reactant in an enzyme-catalyzed reaction (substance upon the enzyme “acts")
144
Enzyme active site
The small part of the enzyme structure where the reaction occurs -Formed due to folding and bending of the protein -Usually a crevice like location in the enzyme
145
Active site
Small part of an enzyme’s structure that is involved in catalysis
146
enzyme –substrate complex
intermediate reaction site formed when the substrate binds to the active site of the enzyme
147
lock–and Key model
fixed, rigid geometrical conformation Only substrates with a complementary geometry can be accommodated at the site
148
induced-fit model
flexible active site that adapt to the substrate
149
enzyme specificity
the limitation of an enzyme to catalyze one specific reaction with one specific substrate
150
absolute specificity
(enzyme – urease catalyzes only the hydrolysis of urea, but no other amides)
151
stereochemical specificity
(glucose oxidase oxidizes only D-glucose not L-glucose)
152
group specificity
(act only on molecules that have a specific functional group)
153
linkage specificity
(Enzyme will act on a particular type of chemical bond, rest of the molecular structure is not considered)
154
Factors that affect enzyme activity:
- optimum temperature - optimum pH - substrate concentration - enzyme concentration
155
Substrate Concentration and Enzyme Activity
An increase in substrate concentration: -increases the rate of reaction (at constant enzyme concentration) -eventually saturates an enzyme with substrate to give maximum activity. Limit of substrate saturation -Substrate concentration reaches its maximum rate -All the active sites are full
156
Turnover number:
Number of substrate molecules converted to product per minute by one molecule of enzyme under optimum conditions of temperature, pH, and saturation
157
Extremeophiles
-Organisms that thrive in extreme environments -Microbial enzymes that are active at conditions that would inactivate human enzymes and enzymes present in other higher organisms
158
Enzyme Inhibitor
substance that slow or stops an enzyme reaction by binding to it
159
Competitive enzyme inhibitor
has a chemical structure and polarity that is similar to that of the substrate. competes with the substrate for the active site. has its effect reversed by increasing substrate concentration
160
Noncompetitive enzyme inhibitor
-decreases enzyme activity by binding to a site on an enzyme other than the active site Causes a change in the structure of the enzyme Prevents the catalytic groups at the active site from properly effecting their catalyzing action Increasing the concentration of substrate does not completely overcome inhibition
161
Irreversible enzyme inhibitor
Inactivates enzymes by forming a strong covalent bond to an amino acid side-chain group with the enzyme’s active site Does not have a structure similar to that of the enzyme’s normal substrate Increasing substrate concentration does not reverse the inhibition process Enzyme is permanently inactivated
162
Antibiotic
substance that kill bacteria or inhibits their growth
163
Sulfa drugs
antibiotic – (first one – sulfanilamide) It inhibits bacterial growth because it is similar to PABA (p-aminobenzoic acid). Many bacteria need PABA as a coenzyme
164
Penicillin
most widely used antibiotic (It weakens the cell walls of bacteria)
165
Cipro
ciprofloxacin hydrochloride – a broad spectrum antibiotic contains several common functional groups (carboxylic acid, ketone & amine)
166
antimetabolites
- competitive inhibitors | - used to treat some infections
167
Proteolytic enzyme
Catalyzes the breaking of peptide bonds
168
Zymogens (pro-enzymes):
An inactive precursor of a proteolytic enzyme.
169
Properties of Allosteric Enzymes
-Have quaternary structure --Composed of two or more protein subunits -Have at least two kinds of binding sites --Substrate and regulator binding sites Active and regulatory binding sites are distinct from each other in both location and shape
170
Blood urea nitrogen (BUN)
common clinical lab procedure – high urea levels in the blood indicate kidney malfunction
171
Angiotensin II
is an octapeptide hormone that increases blood pressure via constriction of blood vessels.
172
ACE
Converts Angiotensin I to angiotensin II in the blood -ACE inhibitors block ACE reaction and thus reduce blood pressure. Monoprilis an example of a ACE inhibitor
173
Vitamins
- Essential in some amounts for the proper functioning of the human body - Must come from dietary sources because the body cannot synthesize them - Conjugated enzymes contain vitamins as part of their structures
174
Vitamin C
-Required in collagen -synthesis and healing of wounds -Found in blueberries, citrus fruits, strawberries, tomatoes Deficiencies are scurvy, weakened connective tissue, slow-healing wounds, and anemia
175
Thiamin
Found in liver, yeasts, whole grain bread | -Deficiencies lead to Beriberi
176
Biotin
Found in liver, yeasts, nuts, eggs Deficiencies include dermatitis, loss of hair, fatigue, and anemia
177
Riboflavin
Found in beef, liver, chicken, eggs, dairy foods Deficiencies lead to Dermatitis
178
Niacin
- Found in chicken, beef, fish | - Deficiency can result in dermatitis, muscle fatigue, and loss of appetite
179
Pantothenic Acid
-Found in salmon, beef, liver, eggs, fresh vegetables -Deficiency can result in fatigue, retarded growth, cramps, and anemia
180
Cobalamin
Found in liver, beef, kidney, fish, milk | -deficiencies are pernicious anemia, nerve damage, and malformed red blood cells
181
Folic Acid (Folate)
Deficiencies are abnormal red blood cells, anemia, and poor growth - The absence of folic acid increases the possibility of a neural tube defect (a defect in the development of the spinal cord). - Neural tube defects usually develop in the first 28 days of pregnancy, often before a woman even knows that she is pregnant.
182
Pyridoxine
Found in meat, liver, fish, nuts, spinach | -deficiency may lead to dermatitis, fatigue, and anemia
183
Retinol (Vitamin A)
Major functions of A: 1. vision 2. regulating cell differentiation 3. maintenance of the health of epithelial tissues 4. reproduction and growth - deficiencies include night blindness, immune system repression, and slowed growth
184
Tocopherol (Vitamin E)
``` is an antioxidant in cells is found in whole grains and vegetables has an RDA of 15 mg deficiencies are hemolysis and anemia 4 forms of vitamin E: 1. alpha 2. beta 3. delta 4. gamma-tocopherol ```
185
Menaquinon (Vitamin K)
is essential to the blood-clotting process | -Deficiencies are prolonged bleeding time and bruising