UNIT 1 Cells, Microscopes [memorise] Flashcards

(58 cards)

1
Q

units

A

1mm = 1000um

1000nm =1um

1m = 1000mm

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2
Q

slides produced by …

+ prepare a slide using a…

A

cutting very thin layers of tissues -

which are then stained

permanently mounted on glass slide for repeated use.

+ liquid specimen, solid specimen & human cells

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3
Q

ensure -

A

preparation method always needs to ensure that

samples are THIN enough to allow LIGHT to pass through

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4
Q

preparing a slide using a LIQUID specimen

A
  • add few drops of liquid sample to a CLEAN SLIDE using a pipette

-lower coverslip over specimen
-gently press down to remove air bubbles

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5
Q

preparing a slide using a SOLID specimen

A

-use scissors/scalpel/tweezers to cut a small sample of tissue

-peel away/cut a very thin layer of cells from tissue sample.

-place sample onto a slide.

-drop of water may be added. Place epidermal tissue into water on slide.

apply drop of IODINE stain. so structure within cell can be observed

-lower coverslip over specimen & press down to remove air bubbles

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6
Q

preparing a slide using HUMAN CELLS

A

-brush teeth, remove bacteria from teeth so don’t obscure view of cheek cells.

-sterile cotton swab; swab inside cheek surface of mouth for 5-10 sec

  1. smear cotton swab on centre of slide for 2-3 sec
  • add drop of METHYLENE SOLUTION
  1. place coverslip on top; lay coverslip down at ONE EDGE & gently lower other edge until flat
  • reduces bubble formation under coverslip

-absorb any excess solution by allowing paper towel to touch one side of coverslip

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7
Q

methylene blue solution works how

A

methylene blue stains negatively charged molecules in cell, - DNA & RNA

so nucleus & mitochondria appear darker than their surroundings

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8
Q

what do coverslips do?

A
  • protect the microscope lens from liquids

-and help to prevent drying out.

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9
Q

📍STAINS - what? colour?

  1. eosin
  2. iodine
  3. crystal violet
  4. methylene blue
  5. congo red

-use small volume of stain to specimen; too much=nothing visible.

A
  1. cell membranes & cytoplasm. pink/red
  2. nucleus & plant cell wall pale yellow. starch blue-black
  3. cells walls, purple.
  4. animal cell nucleus, dark blue.
  5. stains background around cells red, provide contrast with cells
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10
Q

prokaryotes (6)

rmbr: no nucleus, no ER, no membrane-bound structures.

diagram - always (5): cell wall (containg MUREIN, a peptidoglycan), cytoplasm, cell surface membrane, circular DNA, ribosomes.

sometimes (5):
flagellum (locomotion),
capsule (/slime layer, additional protection),
infolding of cell membrane surface (may form photosynthetic membrane/carry out nitrogen fixation),
plasmid (small circle of DNA, several maybe),
pili (attachment to other cells or surfaces, involved in sexual reproduction)

A

unicellular, generally 1-5um in diameter, peptidoglycan cell walls, 70S ribosomes, absense of organelles surrounded by double membrane, circular DNA

-free DNA (NOT SURROUNDED by double membrane)
-free ribosomes
-no organelles (separate/membrane-bound)

-some carry out nitrogen fixation

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11
Q

eukaryotic (features)

yes nucleus, yes (rough/smooth) ER, yes mitochondria.

A
  • up to 40um diameter, 10-100um. 1000x times volume of bacteria

-DNA linear in nucleus, associated with histone proteins. double-membrane nucleus

-80S ribosomes cytoplasm. 70s mitochondria/chloroplasts
-organelles: single/double/no membrane

-cell walls sometimes - cellulose/lignin in plants. Chitin in fungi.

-none carry out nitrogen fixation

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12
Q

flagella prokaryotic vs eukaryotic

A

pro: flagella SIMPLE & LACK microtubules, EXTRACELLULAR (project outside cell surface membrane)

eu: flagella COMPLEX with a 9+2 arrangement of MICROTUBULES, surrounded by cell surface membrane - INTERCELLULAR

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13
Q

cell division pro vs eu

A

pro (bacteria): binary fission, NO SPINDLE.

eukaryotic (plants, fungi, animal): MITOSIS and MEIOSIS, involves SPINDLE. Chromosomes separated by spindle fibres.

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14
Q

plant cells

A

yes nucleus, cytoplasm, large permamnet vacuole (central), thykaloid inside chloroplast, grana (thylakoid stacks in stroma), tonoplast (membrane surrounding vacuole), chloroplast, cell wall.

MIDDLE lamella: thin layer holding cells tgt

plasmodesmata: connects cytoplasm of neighbouring cells.

+Golgi apparatus,

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15
Q

animal cell

A

ER, mitochondria

lysosome / vesicle

Golgi apparatus

CENTRIOLE - ALWAYS NEAR NUCLEUS.

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16
Q

viruses

A

non-cellular structures

with a nucleic acid core (RNA/DNA)

capsid made of protein

some viruses have outer envelope made of phospholipids

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17
Q

& viruses also

A

-code viral proteins to replicate. Use attachment proteins on surface to bind to & infect host cells.
-infect living cells, lytic cycle kills, lysogenic cycle lives & divides.
- = particles. ≠cells.

-smaller than bacteria. virus = 20-300NM DIAMETER.

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18
Q

drawing cells - RULES

📌 DRAW 2-3.

& tissue -> draw layers (not cells)

A

📌 title (SPECIMEN, STAIN, MAGNIFICIATION)

📌 magnification recorded (scale bar)

📌sharp pencil
📌plain white paper
📌clear, single lines
📌no sketching
📌no shading
📌as large as possible
📌well-defined structures
📌only draw visible structures
📌should look like specimen
📌proper proportions
📌clearly labelled - lines do NOT cross, NOT have arrowheads. Connect directly to part of drawing, are on one side of drawing, drawn with a RULER.

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19
Q

most important general notes on drawing

A

📌 cells: DRAW 2-3.

& tissue -> draw layers (not cells).

📌 PLAN drawings: tissues viewed under lower mgf; individual cells NEVER drawn.

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20
Q

nucleus

A

nucleolus deeply staining

nuclear envelope

chromatin (DNA & protein) - deeply staining and thread-like

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21
Q

-scale bar to calculate mgf

A

-use scale bar to find both actual size (written on scale bar) &

image size (measured length of bar)

and find mgf.

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22
Q

eyepiece graticule (engraved ruler)

A

-often divided into 100 smaller divisions

-values of divisions vary depending on mgf.

CALIBRATE graticule every time you view an object.

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23
Q

CALIBRATION is done using…

A

STAGE MICROMETER - a slide that contains a small ruler with an accurate known scale.

📌align stage micrometer under graticule at chosen mgf.

choose 2 aligned points on scale. count divisions. calc mgf factor …

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24
Q

📍📍 1 graticule division/mgf factor/calibration value =

A

number of um stage micrometer ÷ number of graticule divisions on epg

25
📍📍 length of object (um) =
[graticule divisions covered by object] ⨯ [mgf factor we just found number of um÷epg graticule divisions)]
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light microscope - lens mgf? -visible light -max 1500x to 2000x
EYEPIECE lens = x10 mgf. series of OBJECTIVE: each have diff mgf. 📍📍total mgf = eyepiece mgf ⨯ objective lens mgf
27
magnification vs resolution
mgf: number of times a specimen has been enlarged to give a bigger image. resolution: CLARITY, its ability to distinguish 2 separate points on an image as separate objects
28
resolution of light microscope ... also limited by...
-resolution of LM limits mgf usefully achieved; poor resolution = inc. mgf doesn't help! If res. too LOW, 2 separate objects will be observed as ONE point & image blurry/not visible. & it is limited by WAVELENGTH of light; visible light 400-700nm. Resolution can't be smaller than half of wavelength of visible light (max resolution of 200nm); ANY POINTS separated by a distance of LESS than 200nm can't be resolved
29
So why, again, is the phospholipid bilayer & the ribosome UNABLE to be observed?
ANY POINTS separated by a distance of LESS than 200nm can't be resolved by a light microscope. Not distinguishable as separate objects. The specimen is shorter than wl, waves not interrupted, so specimen not detected.
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ELECTRON microscope 📌 large machines permanently installed 📌 create vacuum for e- to travel thru 📌 complex specimen prep 📌 max mgf x500,000, from x100 minimum 📌 max resolution of 0.5nm 📌 specimen ALWAYS DEAD.
→ HIGHER resolution & mgf than light microscopes; ELECTRONS have a much SMALLER WAVELENGTH than visible light. Can behave as waves. → resolution of 0.5nm, 📍 ~0.1nm. Specimens larger than 0.5nm. e- wl = ~0.005nm? More resolving power = shorter light wl. -fires beam of electron at specimen. Transmission EM fire e- through specimen. Scanning EM bounce e- off surface of specimen. E- picked up by electromagnetic lens; using EM coils bc e- can't pass thru glass lens. -specimen e.g., organelles, viruses, DNA, whole cells (detailed); see exterior & 3D shape.
31
light microscope -small & portable. no vacuum. can be simple specimen prep. source: incandescent tungsten-based lamps, light bulbs, LEDs, lasers. -real, inverted.
-specimens larger than 200nm (max resolution 200nm) -eg., whole cells, small plant/animal organisms, tissues with organs (leaves/skin) -max mgf x2,000, x40 minimum -living OR dead specimen. glass lens. stained.
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📌 FUNCTIONS - 1. cell surface membrane [4]
1. controls exchange of materials between internal & external cell environments, separating them. 2. thin, partially permeable, cell membrane formed from phospholipid bilayer. 3. spans diameter of ~10nm. 4. ROLE: regulate nutrient & waste transport in and out of cell.
33
2. nucleus [3]
1. double-layered membrane with pores. 2. contains chromosomes (DNA) & proteins [chromatin] as well as the NUCLEOLI. 3. 10% cell volume, ~1um. in ALL eukaryotic cells.
34
3. nuclear envelope [4]
1. contains many pores 2. thin lipid layers 3. forms part of endoplasmic reticulum (ER). 4. ROLE: nuclear pores regulate passage between nucleus & cytoplasm. RNA travel through to reach ribosomes, transcription =>translation, allowing mRNA & ribosomes to travel out of nucleus & allowing enzymes & signalling molecules to move in.
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4. nucleolus [3]
1. site of ribosome synthesis 2. made of proteins, RNA, DNA. 3. rRNA (ribosomal RNA) genes make ribosomal subunits that exit the nucleus; then combine with proteins in cytoplasm to form functional ribosomes.
36
5. endoplasmic reticulum [3]
1. around nucleus 2. made up of a series of membranes that form flattened sacs & branching tubules within cytoplasm. 3. ER linked with nuclear envelope.
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6. rough ER [3]
1. contains folds of membrane linked with nuclear envelope 2. surface of rough ER covered in ribosomes. 3. ROLE: process proteins produced on ribosomes. Involved in producing proteins to be secreted.
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7. smooth ER [5] TIP: use full name of SER & RER in exam.
1. no ribosomes. 2. ROLE: 📍 involved in production of lipids and steroid hormones (oestrogen, testosterone). 📍carbohydrate metabolism 📍drug/poison detoxification 📍store calcium & its metabolism
39
8. Golgi body [4]
1. near nucleus. Wifi symbol. 2. a SERIES of FLATTENED SACS of membrane filled with liquid & NUTRIENTS, single membrane (not connected) 3. ROLE: modify proteins & lipids, & package them into vesicles for their distribution and transportation 4. lumen (inside), cisternae (top part), cis face (top), trans face (bottom).
40
9. mitochondria [5] numbers depend on tissue and energy needs.
1. double-membraned organelle with embedded proteins. Smaller than chloroplast. 2. Centre filled with nutrient-rich matrix liquid, containing ribosomes, enzymes, & mitochondrial DNA 3. Ribosomes - allowing production of proteins required for respiration ;; Enzymes - aerobic respiration ;; Mitochondrial DNA - small circular DNA coding FUNCTIONAL proteins. 4. INNER MEMBRANE FOLDED to form cristae, providing LARGE SURFACE AREA for embedded proteins involved with aerobic respiration. 5. ROLE: site of aerobic respiration, glucose to ATP
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10. ribosomes [5]
1. formed in nucleolus. 2. found in cytoplasm of all cells OR as part of rough ER in eukaryotic. 3. each ribosome is a complex of RIBOSOMAL RNA & PROTEINS. 4. 80S ribosomes (60s&40s subunits) -> eukaryotic. Smaller 70s ribosomes (50s and 30s subunits) -> prokaryotes, mitochondria, chloroplasts. 5. ROLE: site of translation during protein synthesis (RNA to proteins)
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11. vesicles [3] golgi vesicles (pinched off ends of Golgi body) ;;;;;; vesicle surface, bilayer, internal water.
1. small, membrane-bound sacs 2. ROLE: for transport & storage of substances 3. Can fuse with cell surface membrane to allow EXOCYTOSIS, or bud from membrane during ENDOCYTOSIS.
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12. lysosomes [3] membrane, enzymes, transport proteins. ;;;; autophagy (self-consume), exo/endocytosis.
1. specialised vesicles containing digestive hydrolytic enzymes - worn-out organelles, engulfed pathogens during phagocytosis, cell debris during apoptosis/autolysis 2. ROLE: lysosomes contain enzymes to break down pathogens and to break down non-functioning organelles using hydrolytic enzymes (protease, lipase, lysozyme). Membrane-bound to protect rest of cell (from hydrolytic enzymes). 3. single membrane.
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13. centrioles [3]
1. NOT in flowering plants or fungi. EUKARYOTIC ONLY. & NEAR nucleus. 2. centrioles are hollow fibres made of microtubules - tubulin protein. 9 groups of 3 microtubules each for each centriole. 3. 2 centrioles at right angles to each other form a centrosome; CENTROSOME organises spindle fibres during cell division.
45
14. microtubules [5]
1. hollow tubes made of tubulin protein. 2. a and B tubulin proteins combine to form dimers that are then JOINED into protofilaments. 3. 13 protofilaments in a cylinder make a microtubule. 4. microtubules make up CYTOSKELETON of cell. 5. ROLE: provide SUPPORT & movement of cell.
46
15. cilia HAIR [3]
1. NOT in plant cells. Found in animal & protists cells. Thin, ~10nm. 2. hair-like projections made from MICROTUBULES. 3. ROLE: move cell/s, transport fluid & materials past cilia.
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16. microvilli FINGER [2] note: microvilli ≠ villi
1. finger-like cell membrane projections that 2. ROLE: that increase SURFACE AREA for absorption. 3. eg. lining of small intestine. Kidney tubules.
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17. cell wall [2.5]
1. permeable. Outside cell surface membrane. 1.5. Cellulose fibres crisscross in plants so strong & elastic. 2.5. ROLE: supports structure, protects cell.
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18. chloroplasts [5] NOTE: chloroplast = larger than mitochondria.
1. double-membrane, lipid membrane 2. contains chlorophyll, found in membranes of thylakoids, ROLE: absorb light energy for photosynthesis 3. Thylakoids STACK to form GRANA in stroma. 4. Grana joined together by LAMELLAE. 5. Chloroplast contains small circular pieces of DNA & ribosomes, ROLE: used to synthesise proteins needed in chloroplast REPLICATION & photosynthesis.
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19. plasmodesmata [2]
1. bridges of cytoplasm between neighbouring plant cells. Cytoplasm continues, so substances move easily. 2. ROLE: material transport and communication between plant cells.
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20. vacuole [6]
1. ANIMAL: several small temporary vacuoles/none, ROLE: STORAGE, can contain nutrients, water or waste. 2. PLANT: 1 large permanent vacuole, partially permeable tonoplast membrane, ROLE: to store water & cell sap, & push against cell to keep plant cell turgid, providing more structural support.
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21. cytoplasm [3]
1. jelly-like matrix MADE OF dissolved nutrients & salts. 2. contains organelles, sugars, amino acids, & proteins for GROWTH & REPRODUCTION. 3. GENERAL ROLE: aid material movement, cell shape & organelle network
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micrographs use (3): Shape, Location, Size relative to other organelles.
📌 nucleus largest. 📌 mitochondria second largest. (Often cylindrical with folded inner membrane/circular.) 📌 rough ER near nucleus (sometimes with ribosomes) 📌lysosomes & vesicles smaller than mitochondria.
54
electron micrographs: plant cells
vacuole is large & empty. nucleus = largest DARK region in cell. chloroplasts next largest, grana sometimes visible
55
animal vs plant cells common structures (9)
cell surface membrane, cytoplasm, nucleus mitochondria, RER & SER, Golgi body, Vesicles & lysosomes, ribosomes, microtubules
56
plant cells - differences 1. external 2. internal (4) - ONLY plant cells 3. internal (2) - ONLY animal cells
1. larger, more regular in shape than animal cells. 2. cellulose cell wall ;; large permanent vacuole ;; chloroplasts ;; plasmodesmata 3. ANIMAL: centrioles, microvilli
57
vital role of ATP describe cycle.
ATP → [active transport, muscle contraction, anabolic reactions] → ADP (Adenosine diphosphate) + inorganic P (phosphate) → respiration → back to ATP. -energy released. Process reversed during respiration to make ATP, maintaining constant supply of energy.
58
describe, in simple terms, the vital role of ATP (adenosine triphosphate)
- cells use ATP, a nucleotide, from respiration for energy-requiring processes. e.g., in anabolic reactions to build larger molecules from smaller molecules; to move substances across cell membrane in active transport; move substance within cell. & IN animals, muscle contraction; conduction of nerve impulses.