Unit 1 - Definitions and Equations Flashcards

(128 cards)

1
Q

Attack Rate

A

Incidence Proportion
Proportion of the population that develops illness during an outbreak
= # of new cases / # of people at risk of illness (or in pop)

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2
Q

Case Definitions

A

Set of criteria that a case must meet in order to be definitively diagnosed with a disease
Need to be determined before we can define the “who” of Descriptive EPI
Based off of this, we split cases into confirmed vs probable

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3
Q

Confirmed vs Probable Cases

A

C: person who meets all of the specified criteria and can be diagnosed
P: person who meets the majority but not all of the criteria in order to be definitively diagnosed. Even if health care provider is super sure that they qualify for they diagnosis, they cannot be confirmed until meet all criteria

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4
Q

Case Fatality Rate

A

Proportion of persons with a disease who die from it
Cannot die from a disease if you don’t have it
= # of cause specific deaths / # cases of disease

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5
Q

Cause- Specific Morbidity Rate

A

The morbidity rate from a specified cause for a population

= # of persons with cause- specific disease / # of people in population

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6
Q

Cause- Specific Mortality Rate

A

Mortality rate from a specified cause for a population

= # of cause- specific deaths / # of people in population

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7
Q

Cause- Specific Survival Rate

A

of cause- specific cases alive / # of cases of disease

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8
Q

Cluster

A

Outbreak of disease

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9
Q

Crude Morbidity Rate

A

= # of persons with any and all disease / # of persons in population

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10
Q

Crude Mortality Rate

A

= # of deaths / # of persons in population

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11
Q

Cumulative Incidence

A

Incidence calculated from the incidences of non-dynamic populations at different points in time.
Combining all of the incidences from a given time period from a non-dynamic population

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12
Q

Disease Registry

A

Running list gathered by the CDC based on input from health care providers about what disease they are seeing in private practice/ the public.
Part of passive surveillance requires health care providers to report diseases to the CDC so they can update / track registries/ diseases

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13
Q

Endemic

A

When a population has a higher than normal presence of a disease as their baseline compared to other populations

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14
Q

Epidemic

A

When a population experiences a higher than normal presence of disease compared to baseline presence
Occurs on a larger scale than outbreaks
Community and period is clearly defined

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15
Q

Fertility Rate

A

= # of live births / 1,000 women of childbearing age (15-44)

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16
Q

Fixed vs Dynamic Populations

A

F: non-dynamic
- little movement, stable
- used to calculate cumulative incidence
D: movement, less stability
- where we need standardization of some sort bec we can be less certain about size of population or lengths of time
- at risk group estimated by: population at start, middle, or end of year or average population over entire year
- used to calculate incidence density

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17
Q

National Notifiable Disease Surveillance System (NNDSS)

A

Gather information about diseases from the community
Requires that physicians and other health care providers report certain diseases to them and the CDC in order to keep tracking, update information
Allows them to notify others/ make resources available should an outbreak/ epidemic occur

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18
Q

Incidence

A

Also known as risk or attack rate
The occurrence of new cases of disease or injury in a population over a specified period of time (usually 1 year)
Can mean number of new cases in community or number of new cases per unit population
Used for people who develop a condition during a period of time
Measure of how fast (risk)
= # of new cases of disease / # people at risk

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19
Q

Incidence Density

A

Combination of the incidences over time from a dynamic population

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20
Q

Incidence Rate

A

Person - time rate
Measure of incidence that incorporates time directly into denominator
Describes how quickly a disease occurs in a population
= # of new cases / person-time each person was observed

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21
Q

Incubation Period

A

Time between exposure and onset of disease

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22
Q

Induction Period

A

Synonymous with incubation period

Time between exposure and onset of disease

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23
Q

Infant Mortality Rate

A

Most common measure for comparing health status among nations
Ratio not a proportion
= # of deaths among children < 1 year old / 1000 live births

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24
Q

Infectivity

A

Ability to invade a patient (host)
Incidence
= # infected / # at risk

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25
Latency Period
Time between onset of disease and disease diagnosis
26
Live Birth Rate (Natality)
= # live births / 1,000 population
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Maternal Mortality Rate
= # deaths of women while pregnant or within 42 days of termination of pregnancy / 100,000 live births
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Morbidity
Any departure, subjective or objective, from a state of physiological or psychological wellbeing - disease, injury, disability Measures characterize the number of persons in a population who become ill (incidence) or are ill at a given time (prevalence)
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Mortality
Death of an individual from any cause
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Neonatal Mortality Rate
Neonatal period = birth - 28 days old | = # deaths of children under 28 days old / 1,000 births
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Outbreak
Higher than normal frequency of disease in a localized population compared to baseline values Occurs on small scale than epidemic Interchangeable with cluster
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Pandemic
When an epidemic spreads to cross geographic borders Multi-national, Multi- continent Determined by intensity of spread, multi-continent, and lethality
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Pathogenicity
Ability to cause clinical disease | = # with clinical disease/ # infected
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Period Prevalence
Prevalence measures over specific time period (usually mid year)
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Person- Time
Generally calculated from a long-term cohort study Assumes probability of disease during study period is constant Allows us to standardize population when we don’t know the population size or the time period
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Postnatal Mortality Rate
Postnatal period = 28 days - 1 year | = # deaths of children aged 28 days - 1 year / 1,000 live births
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Prevalence
Proportion of people in a population who have a particular disease or attribute at a specified point in time or over a specified period of time Includes all cases - new and preexisting See for people who have a condition during a period of time Used for measuring chronic disease Measure of how much - burden of disease
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Prevalence Rate
Proportion of the population that has a health condition at a point in time
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Point Prevalence
Proportion of people with a particular disease or attribute on a particular date Prevalence measured at a particular point in time
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Proportion
Comparison of 2 related things Represents a part of a whole Have to factor numerator into denominator
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Proportional Mortality Rate
Proportion of deaths in a specified population over a period of time attributable to different causes = # of cause- specific deaths / total # deaths in population
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Rate
Comparison of 2 things over time or a specified time period Like a proportion but it must include time Part over whole over time period
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Ratio
Comparing 2 non-related things | Numerator and denominator are separate
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Risk
Another term for incidence or attack rate
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Secondary Attack Rate
Looks at the difference between community transmission of illness vs transmission of illness in a household/ other closed populations = # of cases among contacts of primary cases / total number of contacts
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Sentinel / Index Case
Case that epidemiologist’s retrospectively label as the first incidence of disease - look at max incubation period and min incubation period Where we link start/ spread of disease to Cannot always be defined as 1 person - sometimes it is a range or nonexistent Depends on illness and nature of contact with others
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Active Surveillance
Going out into the community and asking questions and looking for new disease/ cases More involved - need a lot of time, people, and resources Need to ask questions, conduct research, observe people you are looking at Ex: John Snow and Broad Street Pump
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Passive Surveillance
Health care providers have to alert the CDC/ NNDSS when they see a certain disease Passive bec they wait for updates from health care providers and then enter information into database - no boots on ground Let’s us track disease frequency and occurrence over time and within populations
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Syndromic Surveillance
Another form of passive surveillance Used when person presents a certain set of symptoms but a definitive diagnosis cannot be given at moment. Use already defined similar diagnosis to guide decisions and protocol until something more definitive can be done Almost- could be phenomenon
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Virulence
Ability to cause death (case fatality rate) | = # deaths / # with infectious disease
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John Snow
Father of Epidemiology Recognized a lot of people in a London neighborhood were sick. He conducted descriptive EPI by going into community and asking questions and keeping track of his information on a map. He traced the bad water which was leading people to develop/ spread cholera to the Broad Street Pump
52
Epidemiology
A public health basic science that studies the distribution and determinants of health related states and events in specific populations to control disease and illness and promote health
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Objectives of EPI
Identify patterns / trends Determine extent Study natural course Identify causes of or risk factors for Evaluate effectiveness of measures Assist in developing public health policy Looking to affect changes on population level
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Epidemiological Assumptions
1. Disease occurrence is not random 2. Systematic investigation of different populations can identify associations and causal/ preventive factors and impact changes on health of population 3. Making comparisons is the cornerstone of systematic disease assessments/ investigations
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Distribution of Disease
``` Frequencies of disease occurrence - counts of disease - counts of disease in relation to size of population Patterns of disease occurrences - Person (Who) - Place (Where) - Time (Where) = Descriptive EPI ```
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Descriptive EPI
Person, Place, Time Who, Where, When Can be used to know if a location is experiencing disease occurrence more frequently than usual for that locale or other locations
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Determinants of Disease
Factors of susceptibility/ exposure/ risk Etiology/ causes of disease Modes of transmission Social / Environmental / biological elements that determine the occurrence/ presence of disease Looks at associations vs causes = Analytic EPI
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Analytic EPI
Why, How
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6 Core Functions of EPI
``` Surveillance Field Investigation Analytic Studies Evaluation Linkages Public Policy ```
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Public Health Surveillance
Portray ongoing patterns of disease occurrence so investigations, control, and prevention measures can be developed and applied Skills: data interpretation - designing and using data collection instruments - data management - scientific writing and presentation
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Field Investigation
Determine source/ vehicle of disease; to learn more about the natural history, clinical spectrum, descriptive EPI (WWW), and risk factors of a disease
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Analytic Studies
Advance the information generated by descriptive EPI techniques Hallmark of analytic studies is use of comparison group Skills: design, conduct, analysis, interpretation, and communication of research study data and findings
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Evaluation
Systematically and objectively determine relevance, effectiveness, efficiency, and impact of activities
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Linkages
Collaborate/ communicate with other public health and health care professionals and the public themselves
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Policy Development
Provide input, testimony, and recommendations regarding disease control and prevention strategies, reportable disease regulations, and health care policy
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Natural History of Disease Timeline
Stage of Susceptibility - environmental, biological, or other Stage of Subclinical disease - body knows you have something but you are pre-diagnosis/ asymptomatic - subclinical = asymptomatic - things are advancing physiologically / pathological changes - induction period = time between exposure and onset of disease Stage of clinical disease - patient and doctor know that disease is presence; may know diagnosis - latency period = time between onset of symptoms and diagnosis Stage of recovery, disability, or death
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Emergency of International Concern
Epidemic that alerts the world to the need for high vigilance Stage between epidemic and pandemic
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Epidemic Curve
Graphical, time based depiction generated during an outbreak/ epidemic reflecting number of cases by date Represents epidemic frequency change over time Incorporates all 3 elements of descriptive EPI
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What does epidemic curve depict?
``` Magnitude and Timing of Disease Occurrence - how quick progression is - speed and intensity of disease - sentinel case/ peak/ outliers - start/ stop/ duration Patterns of disease occurrence - shape - Common/ point source - Propagated ```
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Common/ Point Source EPI curve
Not person to person spread Can be continuous (not repeated) or intermittent (repeated) Disease is derived from a common, single point source for outbreak May or may not have index case
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Propagated EPI curve
Person to person spread Outbreak is spread as infected subjects infect others (secondarily) who then infect others See start to disease and then saw toothing up and down
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Probable Exposure Period
When have min / max, you can look back to determine range of onset - need to know what illness you are working with When look at max, min, and avg incubation time, you can determine the probable exposure period (range)
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Factors in Comparing Measures of Disease Frequency between Groups
1. Number of people affected/ impacted (frequency/ count) 2. Size of the source population (from which disease cases or outcomes arose) or those at risk 3. length of time the ‘population’ is followed - frequency is more more likely to occur at time inc
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Exposure
Exposure to disease, treatment, medicine
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Outcome
Resulting in disease or another health related event
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Counterfactual Theory
Describes the illogical best way to compare groups - impossible In same group, all else being equal, looks at the outcome if the exposure didn’t occur - pretend like the exposure didn’t occur - ex: smoker’s risk of Coronary Heart Disease - Would pretend that they got CHD but not from smoking so they would try to look at CHD separately from smoking
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Exchangeability
Comparability with respect to all other determinants of outcome Assuming groups are as similar as possible without that one factor/ exposure In order to compare groups, need to assume this The way that counterfactual theory becomes possible
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Absolute Differences
Subtracting Frequencies (count) = A - B Ex: 65 surgeries in males and 27 surgeries in females - males had 38 more surgeries or females had 38 fewer surgeries (65- 27) Smaller than relative differences
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Relative Differences
Division of Frequencies (ratio) - = A / B - ex: 65 surgeries in males and 27 surgeries in females - males had 2.4 times the number of surgeries compared to females ( > 140% increase) Division of Proportions - ex: 65 / 70 surgeries in males (93%) and 27/ 59 surgeries in females (102% increase) - females had just 49.5% of proportion of surgeries compared to males - ratio of group proportions
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Risk
Probability of outcome in an individual group based on exposure or non-exposure Proportion Helps us understand the impact of exposure on disease Used to see the association between exposure and outcome, the changes exposure can have, the impact/ relationship of outcome and exposure between 2 groups Also known as incidence risk - proportion
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Probability of Outcome in exposed group
= A / (A + B) | Outcome = numerator because it is the new case that is occurring in the population
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Probability of outcome in non-exposed group
= C / (C + D) | If people are not exposed, why are they getting the disease/ outcome?
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Absolute Risk Reduction
= B - A Risk difference of the outcome attributable to exposure difference between groups Also known as attributable risk Can attribute risk to difference in exposure
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Relative Risk Reduction
= ARR/ R unexposed | Need to ask what the baseline risk is - what would happen if I didn’t take the medicine?
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Number Needed to Treat (NNT)/ Number Needed to Harm (NNH)
= 1 / ARR - always round up to next whole number Number of patients that need to be treated in order to receive the stated benefit or harm - How many patients need to be treat vs harm in order for the effects to occur? To prevent harm, want NNT to be small and NNG to be large
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Risk Ratio
Also known as relative risk or incidence Ratio of risks from 2 different (unrelated) groups = risk of outcome in exposed / risk of outcome in unexposed If ratio = 1 - outcome is equally likely for both groups - numerator = denominator If ratio > 1 - outcome is more likely to occur in comparison group (numerator) - numerator > denominator If ratio < 1 - outcome is less likely to occur in comparison group (numerator) - numerator < denominator
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Risk Ratio Interpretations
= 1.0 - no difference/ increase/ decrease in risks, odds, hazard - n = d > 1.0 - increased ratio - + 1.01 - +1.99 = use decimal value as percent - this will never be considered ‘decreased’ - n > d > 2.0 - increased/ greater risk/ odds/ hazard - use phrase ‘x times greater’ - n > d < 1.0 - decreased ratio - 0.0001 to 0.99 = subtract from 1.0 and convert answer to percentage - this will never be considered ‘increased’ - n < d
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What are the 3 things to look for when interpreting ratios?
1. Group comparison orientation - exposed vs non-exposed 2. Direction of words - increased vs decreased - above 1 vs below 1 3. Magnitude - 80% = 1.8 times vs 20% = 0.80 times
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Forest Plots
Visual representation of ratios Puts multiple ratios together Components - center line and 1.0 = equalness - 1:1 ratio - to the right or left of center line = either greater or lesser than 1
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Odds
Frequency of an outcome occurring vs not occurring - Likelihood of event occurring / likelihood of event not occurring Ratio - comparing 2 different things
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Frequency of exposure- in cases
A / C
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Frequency of non-exposure (controls)
B / D
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Odds Ratio
Ratio of the odds from 2 different groups = Odds of exposure in disease / Odds of exposure in non-diseased = AD / BC = (A / C) / (B / D)
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Confounding
Lack of Exchangeability (comparability) A 3rd variable that distorts a measure of association between exposure and outcome Alternative explanation of the association
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What are the 3 requirements of confounders?
Independently associated with exposure Independently associated with outcome Not directly in the causal- pathway linking exposure and outcome Shown in DAG - direct acyclic graph
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Crude measure of association
Looking at exposure and outcome relationship while ignoring other factors - not looking at confounds Unadjusted association Calculation of odds ratio/ risk ratio
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What is an example of a classic confounder?
Age
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Adjusted Association
Outcome measure of association between exposure and outcome for each individual level of the 3rd variable Weighted average of all levels Authors must tell what variables are used in the adjusting
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Steps for Confounding testing
Calculate crude association Calculate adjusted association Compare crude vs adjusted measures = absolute difference of crude and adjusted measures / crude measure - if crude and adjusted estimates are different by 15%: confounding variable is present
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Impacts of Confounders
Magnitude of association - strength of association - association more extreme or less extreme than crude association - becomes not as impactful because exaggerates the real measure of association Direction of Association - produces association in opposite direction
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Why do we want to control for confounders?
To get a more precise/ accurate estimate of the measure of association between exposure and outcome
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How to control confounding?
During Study Design stage: - Randomization, restriction, matching Analysis of Data stage: - stratification, multivariate statistical analysis
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Randomization
Allocates an equal number of subjects with the known and unassessed confounders into each intervention group Strengths: - will be successful with large enough sample size - stratified randomization more precisely assures equalness Weaknesses: - sample size may not be large enough to control for all unknown/ unassessed confounders - process doesn’t guarantee successful, equal allocation between all intervention groups for all known and unknown confounders - only practical for intervention studies
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Restriction
Study participation is restricted to only subjects who do not fall within pre-specified categories of confounder Strengths: - straight forward, convenient, and inexpensive - doesn’t negatively impact internal validity Weaknesses: - sufficiently narrow restriction criteria may negatively impact ability to enroll subjects - reduced sample size - if restriction criteria is not narrow enough, it will allow introduction of residual confounding effects - eliminates researchers ability to evaluate varying levels of the factor being excluded - can negatively impact external validity
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Matching
Study subjects selected in matched pairs related to the confounding variable, to equally distribute confounder among each study group Strengths: - intuitive, some feel it gives greater analytic efficiency Weaknesses: - difficult to accomplish, can be time consuming, and potentially expensive - doesn’t control for any confounders other than those matched on
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Stratification
Descriptive/ statistical analysis of data evaluating association between exposure and outcome within various strata within the confounding variable Strengths: - intuitive, straight forward, and enhances understanding of data Weaknesses: - impractical for simultaneous control of multiple confounders, esp those with multiple strata within each variable being controlled
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Multivariate analysis
Statistical analysis of data by mathematically factoring out the effects of the confounding variable Strengths: - can simultaneously control for multiple confounding variables - OR’s can be obtained and interpreted Weakness: - process requires individuals to clearly understand and interpret the data - can be time consuming
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Effect Modification
Also known as interaction A 3rd variable that modifies the magnitude of effect of a true association by varying it within different strata of a 3rd variable - modifies the effect across the strata If present, we must report the measures of association for each strata individually - do not want to control for/ adjust these Is present when the odds ratio changes substantially according to different strata of the effect modifying variable
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Steps in testing for Effect Modification
Calculate crude measure of association between exposure and outcome - odds ratio, risk ratio Calculate strata specific measures of association between exposure and outcome for each strata of the 3rd variable - odds ratio, risk ratio Compare each of the strata specific measures of associations between each other - measure of association between the lowest and highest strata of the effect-modifying variable will be 15% different if effect modification is present
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Cause
A precursor event, condition, or characteristic required for the occurrence of the disease or outcome Help us understand things better Not just one cause - usually multiple- component factors
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Associations - definition and types
Relationships between an exposure/ treatment and outcome/ disease 1. Artifactual associations 2. Non-causal associations 3. Causal associations
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Artifactual Association
Arise from bias and or confounding Something generates false measure of association Makes us think there is a relationship but there isn’t
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Non-causal associations
Occurs in 2 different ways 1. Disease may cause the exposure rather than exposure causing disease 2. Disease and exposure are both associated with a third factor (confounding) - can create mild distortion - there is still a relationship between disease and exposure
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Causal associations
Exposure directly linked to outcome
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Sufficient Cause
Type of causal relationship Precursor event that is sufficient enough on its own to induce disease and does so every time. A set of minimal conditions/ events that inevitably produce disease - can still have multiple, required components Rare - except for genetic abnormalities
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Component Cause
= Risk Factors Type of causal relationship A factor/ element that if present/ active increases the probability of a particular disease - Multiple, required components that collectively act to induce disease Some patients must be primed or susceptible to disease before component causes induce disease - usually involves age - more risk factors + more time = more likely to get disease
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Necessary Cause
Type of Causal Relationship A cause precedes a disease and has the following relationship with it: - cause must be present for disease to occur but cause may be present without disease occurring Cause is not sufficient to induce disease by itself but is needed to make the diagnosis
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Synergism
Biological interaction of 2+ component- causes such that the combined measure of effect is greater than the sum of individual effects Factors work together; both
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Parallelism
Biological - interaction of 2+ component- causes such that the measure of effect is greater if either is present Needs one or the other but not both Factors work in parallel; either Occurs if both risk factors are present but measure of association doesn’t change
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Multiple Causation
Multiple risk factors working together to collectively become sufficient- causes Component- causes have correlations - collectively and with enough time present in patient
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Hill’s Guidelines
Asks “what do we need in order to make the jump from association to cause?” 1. Strength 2. Consistency - specificity 3. Temporality 4. Biologic Gradient 5. Plausibility - coherence, experiment, analogy The higher number of criteria met, when evaluating an association, the more likely it may be causal
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What process is Hill’s Criteria a part of?
Causal Inference Process | - an interpretive, application process
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Strength
First category of Hill’s criteria The size of the measure of association The greater the association, the more convincing it is that the association might be causal - the larger the number, the more important it is Ignores the concept of changing exposure Dependent on disease and exposure and their relationship
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Consistency
Second category of Hill’s criteria Also known as reproducibility The repeated observations of an association in different populations under different circumstances in different studies May still obscure the truth - observational studies over long time can lead us astray - Menopausal Hormone Therapy - disproved via the Women’s Health Initiative Study
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Temporality
Third category of Hill’s criteria Reflects that the cause precedes the effect/ outcome in time Time- order: - Proximate causes = short term interval - distant causes = long term interval Want to start looking at closest - there could be delayed hypersensitivity - ex: drug side effect
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Example of Temporality - Fact, inference, actuality
A number of studies have shown higher lung cancer rates among former smokers during the first year after cessation compared to those who continue to smoke Inference: continuing to smoke must decrease the risk of lung cancer Actuality: substantial portion of those who voluntarily stop smoking at any given time do so because of early symptoms and signs of the already-existing but as yet undiagnosed illness
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Biologic Gradient
Fourth category of Hill’s criteria Presence of a gradient of risk associated with degree of exposure - dose response Looking at intensity - whatever relationship is with less exposure, as exposure increases, the risk is changed - wrt negative component cause: more of it should be bad Some demonstrate a threshold effect - no effect until a certain level of exposure is reached - ex: lead exposure and mental retardation
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Plausibility
Fifth category of Hill’s criteria Presence of a biological feasibility to the association, which can be understood and explained (biologically, physiologically, medically) Want to answer the questions: “does it make sense? Can we explain it?”