Unit 3D Flashcards

Enzymes in Action (53 cards)

1
Q

What is an enzyme?

A

An enzyme is a protein molecule that acts as a catalyst in a biochemical reaction.

Enzymes speed up chemical reactions without being consumed in the process.

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2
Q

What are proteins made of?

A

Proteins are made of amino acids.

There are 20 different amino acids that combine in various sequences to form proteins.

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3
Q

What is the central component of an amino acid?

A

A central (alpha) carbon with four chemical groups attached to it.

The four groups are a hydrogen atom, an amino group, a carboxyl group, and a variable R group.

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4
Q

How are amino acids linked together?

A

Amino acids are linked together by peptide bonds.

These bonds are formed through condensation reactions.

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5
Q

What occurs during a condensation reaction between two amino acids?

A

Water is produced.

This reaction results in the formation of a peptide bond between the amino acids.

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6
Q

What is a dipeptide?

A

A dipeptide is formed by two amino acids linked by a peptide bond.

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7
Q

What is a tripeptide?

A

A tripeptide is formed by three amino acids linked together.

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8
Q

What is a polypeptide?

A

A polypeptide is formed when many amino acids join together.

A polypeptide with more than 50 amino acids is called a protein.

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9
Q

What is the difference between the N terminal and C terminal of a protein chain?

A

The N terminal is the start of the protein chain, and the C terminal is the end of the protein chain.

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10
Q

Fill in the blank: A polypeptide with more than 50 amino acids is called a _______.

A

protein.

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11
Q

Research the structure of the R groups of which two amino acids?

A

Cysteine and threonine.

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12
Q

What forms when two amino acids undergo a condensation reaction?

A

A dipeptide is formed.

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13
Q

What is produced during the condensation reaction of amino acids?

A

Water is produced.

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14
Q

True or False: There are 20 different R groups, leading to 20 different amino acids.

A

True.

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15
Q

What is the active site of an enzyme?

A

The part of the enzyme where the biochemical reaction takes place

The active site consists of a specific shape formed by a small number of amino acids.

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16
Q

What are the common shapes of secondary structures in proteins?

A
  • a-helix
  • B-pleated sheet

These structures are formed by orderly shapes of polypeptide chains.

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17
Q

What holds the secondary structure of a protein in shape?

A

Hydrogen bonds

The bonds are between the -NH of one peptide link and the -C=O of another amino acid.

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18
Q

How does the tertiary structure relate to an enzyme’s active site?

A

The tertiary structure gives the enzyme the shape of its active site

The specific shape allows for the binding of substrates.

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19
Q

What happens when an enzyme catalyzes a reaction?

A

The substrate binds to the active site and is converted into products

After the reaction, the product is released, and the active site is available for further reactions.

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20
Q

What is a substrate in the context of enzyme activity?

A

The substance that binds to the active site of an enzyme

Specific substrates have a complementary shape to the active site.

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21
Q

What is the ‘lock and key’ mechanism?

A

The concept that the active site of an enzyme is a specific shape that only a complementary substrate can fit

This mechanism illustrates how enzymes are specific to their substrates.

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22
Q

What happens to an enzyme if the temperature exceeds 40°C?

A

The enzyme denatures and loses its shape

This occurs because the hydrogen bonds break, altering the active site.

23
Q

What is a catalyst?

A

A substance that increases the rate of a reaction without being changed itself

Catalysts remain unchanged at the end of the reaction.

24
Q

What is required for a reaction to occur according to collision theory?

A
  • Particles must collide
  • Particles must have sufficient energy

The minimum energy required for a reaction to occur is known as the activation energy.

25
What is meant by 'denatured' in terms of enzymes?
An enzyme that has lost its functional shape and can no longer act as a catalyst ## Footnote Denaturation can result from extreme temperatures or pH changes.
26
Fill in the blank: The _______ binds to the active site of the enzyme.
substrate ## Footnote The specific substrate fits into the active site enabling the biochemical reaction.
27
What are enzymes?
Biological catalysts that speed up reactions and remain unchanged at the end of the reaction. ## Footnote Enzymes participate in reactions but are not consumed.
28
What is a catalyst?
A substance that speeds up a reaction. ## Footnote Catalysts can be involved in the reaction but are not permanently changed.
29
What must occur for a reaction to take place according to collision theory?
Particles must collide and have enough energy to react. ## Footnote The energy of the collision depends on the speed and angle of the particles.
30
What is activation energy?
The minimum energy needed for particles to react. ## Footnote Activation energy is a crucial factor in determining reaction rates.
31
How does an enzyme affect activation energy?
It lowers the activation energy needed for a reaction. ## Footnote This increases the number of successful collisions and speeds up the reaction.
32
What is catalytic activity?
The increase in the rate of a reaction caused by the inclusion of an enzyme. ## Footnote Catalytic activity is a key characteristic of enzymes.
33
What is a substrate?
The molecule that is affected by the action of the enzyme. ## Footnote Substrates are converted into products in enzyme-catalyzed reactions.
34
What is an active site?
The area of an enzyme where a substrate binds. ## Footnote The active site is specific to the substrate it binds.
35
What does it mean if an enzyme is denatured?
The tertiary structure of the enzyme is changed. ## Footnote Denaturation can result from changes in temperature or pH.
36
How can enzyme reactions be measured?
By measuring the decrease in substrate or the increase in product. ## Footnote Measuring product increase is often easier because the starting measurement is known.
37
Why is it important to record the initial rate of an enzyme-catalyzed reaction?
Because the rate will decrease as the substrate is used up and its concentration decreases. ## Footnote Initial rates provide a baseline for understanding the reaction kinetics.
38
Fill in the blank: The _______ is the area of an enzyme where a substrate binds.
active site
39
True or False: Enzymes are consumed in the reactions they catalyze.
False
40
What do enzymes need to work effectively?
Specific conditions ## Footnote If these conditions are not present, enzyme-catalysed reactions may slow down or not work at all.
41
What is the optimum temperature for enzymes in humans?
About 40°C ## Footnote Each enzyme has an optimum temperature at which it works fastest.
42
How does the reaction rate change as temperature increases up to the optimum temperature?
Rate increases ## Footnote As temperature increases, the reaction rate increases until the optimum temperature is reached.
43
What happens to enzymes above their optimum temperature?
Enzymes denature ## Footnote Hydrogen bonds in the enzyme break, causing the enzyme and active site to lose shape, leading to no catalysis.
44
What effect does a temperature below optimum have on enzyme activity?
Slower reaction ## Footnote Below optimum temperature, there is less energy, fewer collisions, and a slower reaction.
45
What is the optimum pH range for many enzymes in the body?
Between 7 and 8 ## Footnote This range corresponds to the pH of most body cells and blood.
46
What is a specific example of an enzyme with an extreme optimum pH?
Pepsin ## Footnote Pepsin is a stomach enzyme with a very low optimum pH, around 1-2.
47
How does pH affect the charge on the active site of an enzyme?
It changes the charges ## Footnote Changes in pH can affect the ability of substrates to bind to the active site.
48
What happens to the carboxyl group of an amino acid at low pH?
It is uncharged ## Footnote At high pH, it donates H+ and becomes negatively charged.
49
How does substrate concentration affect the rate of reaction?
Increase in rate of collisions ## Footnote Higher substrate concentration leads to more collisions and an increased reaction rate.
50
What happens if the substrate concentration is too high?
No more active sites available ## Footnote Increasing substrate concentration will no longer affect the rate of reaction.
51
What is the effect of increasing enzyme concentration on the reaction rate?
Increases reaction rate ## Footnote More enzyme concentration leads to more collisions and an increased reaction rate.
52
What occurs if the enzyme concentration is too high?
Too many free active sites ## Footnote The rate of reaction will no longer increase when there are too many active sites compared to substrate molecules.
53
Fill in the blank: The optimum conditions for protease, an enzyme, are around pH _______ in the stomach.
1-2