Using Polymerase Chain Reaction to Detect Bitter-Tasting Flashcards
receptors
receives chemical signals from outside a cell
example: molecule binds with it and signals its presence to the brain as one of the tastes.
gene expression
the process by which the instructions in our DNA are converted into a functional product, such as a protein.
phenylthiocarbamide (PTC)
bitter tasting compound detected by some, but not all, humans
gene
determined by genetics
humans have 2 copies
Example: TASR2R38
TASR2R38 gene
- Determines whether an individual detects a powerful bitter taste, slightly bitter, or no taste at all.
- Two of the most common variations differ at only one nucleotide- single nucleotide polymorphism (SNP.
genotype
genetic identity
Chelex
membrane, DNA
Chelex bead
TAQ poly
nucleotides
pH buffer
salts
Cheek cell DNA extraction
- Saline solution in mouth, rinse cheek and spit.
Saline is an isotonic solution for the cheek cells. - Centrifuge- pellet is the concentrated cheek cell and supernantant is the trash/buffers, etc.
- Add suspended cheeck celss to Chelex and boil. The boiling lyses the cell.
- Centrifuge again. DNA will be in supernatant and the pellet is protein.
- Pipette DNA supernantant into tube with Chelex bead- bead contains TAQ poly and nucleotides & pH buffer
Cheek cell DNA extraction
- Saline solution in mouth, rinse cheek and spit.
Saline is an isotonic solution for the cheek cells. - Centrifuge- pellet is the concentrated cheek cell and supernantant is the trash/buffers, etc.
- Add suspended cheek cells to Chelex and boil. The boiling lyses the cell.
- Centrifuge again. DNA will be in supernatant and the pellet is protein.
- Pipette DNA supernantant into tube clean tube
- Add PTC primer/dye to PCR bead (taq poly, nucleotides, ph buffers) and dissolve.
- Pipette cheek cell DNA into the primer/dye.
- Thermal cycle
-denaturing (94 C) 30 sec
-annealing (64C) 45 sec
-extending (72C) 45 sec
Cheek cell DNA extraction
- Saline solution in mouth, rinse cheek and spit.
Saline is an isotonic solution for the cheek cells. - Centrifuge- pellet is the concentrated cheek cell and supernantant is the trash/buffers, etc.
- Add suspended cheek cells to Chelex and boil. The boiling lyses the cell.
- Centrifuge again. DNA will be in supernatant and the pellet is protein.
- Pipette DNA supernantant into tube clean tube
- Add PTC primer/dye to PCR bead (taq poly, nucleotides, ph buffers) and dissolve.
- Pipette cheek cell DNA into the primer/dye.
- Thermal cycle
-denaturing (94 C) 30 sec
-annealing (64C) 45 sec
-extending (72C) 45 sec
restriction enzyme
can cleave DNA at or near a specific sequence of bases.
Hae III
SNP at bitter PTC compound
electrophoresis gel
method for separation and analysis of macromolecules
Hae III
SNP at GGCC only
electrophoresis gel
method for separation and analysis of macromolecules
tt nontaster
homozygous recessive
TT taster
homozygous dominant
Tt taster
heterozygous