Week 2 Flashcards

(44 cards)

1
Q

—————- : a type of gene mutation in which the addition or deletion of one or more nucleotides causes a shift in the reading frame of the codons in the mRNA, which may lead to the alteration in the amino acid sequence at protein translation.

A

frameshift

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2
Q

Synonymous vs Non-Synonymous Substitution

A
  • Synonymous –> silent (no effect on the amino acid )
  • Non-synonymous –> Missense / nonsense (alters an amino acid which may produce a malfunctioning protein)
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3
Q

Nonsense vs missense mutation

A

Missense: substituation of a different amino acid into the amino acid sequence as a result of the nucleotide change
Nonsense: a point mutation which introduces a premature stop codon into mRNA sequence as a result of a nucleotide change.

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4
Q

what type of mutation causes Cystic Fibrosis?

A

Loss of fxn on the CFTR gene

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5
Q

what type of mutation is Duchenne muscular dytrophy (DMD) + Mode of inheritance

A

Type: out-frame mutation on the Dystrophin gene
mode : X-linked recessive (XLR)

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6
Q

Clinical presentations of Duchenne Muscular dystrophy (DMD)

A

1) Progressive muscle weakness
2) Wheelchair dependency
3) delayed motor milestones
4) cardiomyopathy

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7
Q

Clnical case

  • 3-year-old boy
  • Unable to run
  • Muscle weakness
  • Uncle died at age 21 and was on wheelchair
  • Muscle biopsy
  • Loss-of-function mutations in the Dystrophin gene (X-linked recessive)
  • Mostly deletions of part or all of the gene

Disorder?

A

DMD - Duchenne muscular Dystrophy

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8
Q

Give an example of a disease caused by an inframe mutation (Gain of function mutation )

A

Beckers muscular Dystrophy

*some Dystrophin produced

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9
Q

clinical case:
* 6-year-old girl
* Multiple fractures/ minor trauma
* Blue sclera
* Abnormal structural integrity of bones

disease?

A

Osteogenesis Imperfecta (OI type IV)

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10
Q

Osteogenesis Imperfecta are caused by Altered structures of ? what type of mutation?

A

type: Dominant negative mutations
altered sturctures: pro α1(1)/ pro α2(1) chains/ Integration into triple helix

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11
Q

Type of mutation of Type I OI

A

Nonsense mutation

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12
Q

Type of mutation of Type II-IV OI

A

Missense, dominant negative

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13
Q

what syndrome is missing chromosome 4?

A

Wolf-Hirschhorn syndrome, Huntington chorea, Achondroplasia

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14
Q

Why do people with Wolf-Hirschorn (WHS) do not develope Huntington Disease or Achondroplasia ?

A

Becasue they 4p gene is delelted at different regions

Wolf-Hirschhorn syndrome (4p-)
HD (4p16.3)
Ach- FGFR3 (4p16.3)

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15
Q

Type of mutation of Osteogenesis Imperfecta (COL1A1 vs COL1A2)

A

COL1A1–> dominant negative
COL1A2 –> loss of function

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16
Q

Clinical case:
* 4-year-old boy
* Unusual skin pigmentation- 7 Café-au-lait macules > 5mm
* spine –> mild scoliosis
* Optic glioma
* Multiple Lisch nodules (iris hamartomas)

Disroder?

A

NF1 - Neurofibromatosis Type 1

Lisch nodules

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17
Q

————- The fraction/proportion of individuals with a genotype known to cause a disease who have any signs or symptoms of the disease

  • Does not involve severity of the disease
  • Can be aged-dependent
A

Penetrance

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18
Q

MoI + type of mutation of Hereditary Breast and Ovarian cancer?

*MoI : mode of inheritance

A

MoI : Autosomal dominant inheritance (AD)
mutations in : BRCA1/2

* Reduced penetrance (Females have 87% risk , males have 20% risk)

19
Q

Reduced penetrance typically described for autosomal [dominant/recessive] diseases

A

Dominant

Note:
can also apply to recessive ones (e.g.haemochromatosis)

20
Q

Autosomal recessive disease w/ Reduced penetrance

A

Haemochromatosis

21
Q

MoI of Huntington disease

A

Autosomal dominant

22
Q

cause of Huntington disease

A

CAG trinucleotide repeat expansion in HTT gene
(ON an EXON)

23
Q

CF of Huntington disease

A

Motor:
involunary –> chorea, rigidity, dystonia
Voluntary –> Clumsines, dysarthria, visual gaze
Cognitive: global decline in cognitive abilities
Psychiatric: depression, personality changes (bioplar), psychosis

Mean age of onset: late 30’s-40’s (Anticipation is observed)

Triade of clinical findings: motor, cognitive, Psychiatric

24
Q

Normal CAG count?

A

6-26 repeats
* no risk of developing HD and no known risk to children

25
**Intermediate alleles** of Huntingtin genes
**27-35** CAG repeates * No risk for HD, but a small risk to children (more likely if paternal transmission)
26
**Reduced penetrance** allele of HD
**36-39 CAG repeats** * May develop HD and 50% risk to children
27
**Complete penetrance** allele for HD
**>40 CAG repeates** * will develop HD and a 50% risk to children
28
MoI of Tuberous sclerosis
AD , full penetrance
29
Allelic vs locus heterogeneity
Allelic : genetic disorder caused by many mutations in the **same gene** Locus: mutations in a number of **different genes**
30
A disease w/ marked **Allelic heterogeneity**
Cystic fibrosis (CFTR mutations)
31
Diseases that exhibit **Locus Heterogeneity**
1) Tuberous sclerosis (TSC1 & TSC2) 2) Hereditary Multiple Osteochondromas (EXT1 & EXT2) 3) Non-syndromic retinitis pimentosa
32
-------------- is the variation in the severity of a disorder in individuals who have inherited mutations in the same gene or even the **same** disease alleles (extent to which a genetic defect is expressed)
Variable expressivity
33
------------------- : chromosomes of a pair are inherited from same parent, instead of one being inherited from the father and the other from the mother.’
Uniparental Disomy (UPD)
34
Isodisomy vs heterodisomy
**Heterodisomy** means that both parental homologues are present, while **isodisomy** refers to the presence of two copies of one parental homologue
35
CF of **Angelman Syndrome** ('Happy puppet' Syndrome)
* **Ataxia** (loss of coordination) * **Developmental delay** * **Microcephaly** * **seizures** * **Minimal use of words** * Behavioural: excitability , **frequent laughter** * **Wide mouth** (spaced out teeth) * **Prognathism** ( protruding large lower jaw) * **light coloured skin, hair, and eyes** * Characterisitic EEG
36
Angelman Syndrome is cause by what type of mutation?
loss of function of **maternally inherited** UBE3A gene at 15q11-q13
37
CF of Parder-Willi Syndrome (PWS)
* Infancy -> hypotonia (flapping), Feeding difficulties * Later --> excessive eating, **obesity** * **Developmental delay** * **Hypogonadism** (reduced testosterone production) * **Short stature** * Bitemporal narrowing * Palpebral fissures (almond-shaped, slightly upslanting)
38
Parder-Willi Syndrome are caused by what type of mutation?
Microdeletetion of **Paternally inherited** genes at 15q11-q13 SNPRN,NECDIN
39
CF of Beckwith-Wiedmann Syndrome
* Overgrowth syndrome, **macrosomia** (big baby) * **Macroglossia**(large tougue) * **Hypoglycaemia (neonatal)** * Umbilical hernia * Asymmetry/ hemihyperplasia * **Embryonal tumours** (Wilms, hepatoblastoma) * Renal anomalies * **Ear creases/ ear pits**
40
Beckwith-Wiedemann Syndrome is casued by what type of Mutation?
MoI: **paternal** uniparetnal disomy (UPD) * Mutations in **11p15.5** (or epigenetic changes at DMR1)
41
Example of a **Skewed X-inactivation** syndrome
**Duchenne muscular dystrophy** MoI: X-linked recessive
42
Skewed X-inactivation is more common in **[males/females]**?
**females** note: X-linked recessive disorderes such as Duchenne muscular dystrophy
43
----------------------- : a process by which one of the copies of the X chromosome is inactivated in therian female mammals
X-chromosome inactivation
44
-------------: **Monoallelic expression of certain genes in zygote based on parent of origin** ( process by which only one copy of a gene in an individual (either from their mother or their father) is expressed, while the other copy is suppressed)
Genomic imprinting