WK 2 - metab Flashcards

(58 cards)

1
Q

The sum of all chemical reations within a living organism. It
is called an energy balancing act because it is a
combination of Catabolism and Anabolism

A

MICROBIAL METABOLISM

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2
Q

hemical reactions in which electrons
are gained, lost or shared in a chemical reaction

A

REDOX REACTION

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3
Q

the loss of electrons by a molecule, atom or ion

A

OXIDATION

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4
Q

the gain of electrons by a molecule, atom or an
ion

A

REDUCTION

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5
Q

Special molecules that cells use to carry electrons (often in
H atoms)

A

NADH AND FADH

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6
Q

Two important carriers (energy)

A

NADH and FADH

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7
Q

BASIC METABOLIC REACTION

A
  • Exergonic – produce more energy than they can consume
  • Endergonic – consume more energy than they can
    produce
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8
Q

Phase where the simple substances are synthesized to
complex materials which makes up the living tissue

A

ANABOLISM

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9
Q

Involves dehydration synthesis

A

ANABOLISM

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10
Q

Phase where there is a breakdown of complex molecules
into simple material, with the resulting occurrence of
release of energy

A

catabolism

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11
Q
  • Organisms catabolize carbohydrates as the primary energy
    source for anabolic reactions via
A

cellular respiration

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12
Q
  • The process of converting nutrients into ATP.
A

cellular respiration

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13
Q
  • Molecules are being oxidize and the final electron acceptor
    will be in the form of inorganic molecule or oxygen
A

cellular respiraiton

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14
Q

Results in complete breakdown of glucose to carbon
dioxide, water and a lot of ATP

A

Aerobic Cellular Respiration

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15
Q

4 steps are involved of aerobic cellular respiration

A

o Glycolysis
o Synthesis of acetyl-COA
o Krebs cycle
o Electron transport chain

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16
Q

glycolysis is based on

A

Embden-Meyerhof-Parnas Pathway

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17
Q

2 stages of glycolysis

A

o Energy investing stage
▪ Needs 2 ATP to breakdown the glucose
into Glu-6-P down to Fru-1,6-bP
o Energy conserving stage
▪ From Fru-1,6-bP, it will produce DHAP
and GAP, and they will produce 2 Pyruvic
acid (1 each)
▪ It will produce 4 ATP and 2 NADH

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18
Q

net gain of glycolysis

A

Net Gain: 2 NADH and 2 ATP (4-2 kase 2 yung ginamit na
ATP sa 1st stage)

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19
Q

where does glycolysis take place in

A

cytoplasm

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20
Q

produces important intermediate pentoses used in the
synthesis of nucleic acids, glucose from carbon dioxide in
photosynthesis and certain amino acids.

A

pentose phosphate pathway

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21
Q

net gain of pentose phosphate pathway

A

Yields a net gain of only 1 ATP plus 12 NADPH for each
molecule of glucose oxidized

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22
Q

net gain of entner- duodoroff pathway

A
  • Produces 2 NADPH and 1 ATP for each molecule of glucose
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23
Q
  • Bacteria that have enzymes for this pathway can metabolize
    glucose without either glycolysis or the PPP
  • Found in some gram-negative bacteria and none in gram
    positive bacteria
A

entner-duodoroff pathway

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24
Q

synthesis of acetyl coa net gain

A

Produces 1 𝐶𝑂2, 1 NADH, 1 CoA per 1 Pyruvic Acid (so bale
x2 mo sila since 2 Pyr yung naproduce during glycolysis)

25
kreb cycle net gain
s 3 NADH, 1 FADH, 1 GDP and 2 𝐶𝑂2 (x2 ulit kase 2 CoA yung naproduce natin dun sa synthesis of CoA)
26
kreb cycle electron carrier of kreb cycle
FADH and NADH
27
Most of the ATP made inn cellular respiration come from the stepwise release of energy through a series of redox reactions between molecules known as the
electron transport chain
28
where does etc occur
Most occur in a membrane. The ETC is located in cristae of mitochondria in eukaryotes. in prokaryotes, ETC happens in plasma membrane
29
etc net gain
* 1 NADH = 3ATP, 1 FADH = 2ATP
30
carrier molecules
o Flavoproteins o Cytochromes o Ubiquinone or CoQ
31
Utilizes glycolysis, synthesis of acetyl-CoA, Krebs cycle, and electron transport chain; results in complete breakdown of glucose to carbon dioxide, water and energy
aerobic cellular respiration
32
which makes more atp
anaerobic cellular respiration
33
alternative system that allows glycolysis to continue without the other steps of respiration
fermentation
34
net gain of fermentation
2 atp
35
The carbon atoms required to synthesize glucose are derived from the intermediated produced during glycolysis and the Krebs’s cycle and from lipids or amino acids
polysaccharide biosynthesis is
36
* Cells synthesize fats by joining glycerol and fatty acids * They glycerol portion is derived from dihydroxyacetone phosphate (glycolysis intermediate)
lipid biosynthesis
37
* Complete set of genes
genome size
38
genome size
* In general, free-living bacteria have longer genomes and more genes than bacteria that are obligate parasites * Bacteria thriving inside a human has a shorter genome
39
he genetic composition of the organism
genotype
40
when DNA is passed from mother to offspring cell, this is what happened in nature the vast majority of the time.
vertical gene transfer
41
HORIZONTAL GENE TRANSFER
transduction, transformation and conjugation
42
Uses bacterial viruses called bacteriophages, to transfer from 1 infected cell to another
transduction
43
It is the ability of some cells to take up free floating DNA found in the environment,
transformation
44
Allows for the transfer of DNA through a structure called a pilus from one cell to another
conjugation
45
This is done by copying the plasmid and sending the strand of copied DNA to the recipient through the conjugation pilus
plasmid transfer
46
two live bacterial cells must come into direct contact with one another.
conjugation
47
final result of plasmid transfer
The final result is a copy of the plasmid in both the donor and the recipient cell
48
hollow, pipe-like structure that connects the cytoplasm of the donor cell to the cytoplasm of the recipient cell.
conjugation pilus
49
Only a portion of the chromosome is transferred before the conjugation pilus is detached
chromosme transfer
50
is the ability of some cells (competent cells; more on gram positive) to take up free floating DNA found in the environment (DNA contents from the destroyed bacteria)
transformation
51
The DNA either has to be incorporated into the host cell DNA chromosome (via genetic recombination: mix and match to the genes of bacteria) or it ends up being degraded
transformation
52
* Types of Bacteriophages:
virulent and temperate
53
Uses the bacterium as a viral synthesis factory
virulent bacteriophage
54
▪ They break down the bacterial cell machinery to produce more phages ▪ Progeny phages are released from the bacterium as the cell lyse
virlent bacteriophage
55
▪ Phage genome may integrate into the bacterial chromosome as a prophage ▪ Bacteria that contain a prophage are said to be lysogenic for that phage.
temperate bacteriophage
56
* During this process, the bacteriophage chops up the host chromosome into many small fragments. * When the baby bacteriophage are being assembled, some of these host DNA chunks can accidentally be packed into the new viral particles * They are then carried to a new host cell, where they are injected and can cause genetic recombination.
Generalized Transduction
57
The viral DNA goes dormant by incorporating itself into the bacterial DNA chromosome
specialize dtransduction
58