4.3 mechanisms of Gene transfer Flashcards

(28 cards)

1
Q

using DNA binding proteins, the chromosome is organized into a…

A

nucleoid

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2
Q

genome

A

complete set of genes within an organism

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3
Q

plasmid

A

small circles with base pairs of DNA that are separate from the chromosome

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4
Q

what are plasmids also called

A

chromosomal genetic elements

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5
Q

what does chromosomal genetic elements mean

A

they encode non essential genes, therefore if daughter cell lacks plasmid, it still viable.

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6
Q

horizontal gene transfer

A

transfer of genetic information from host organism to another recipient organism

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7
Q

vertical gene transfer

A

happens every time cell divides, from host organism to its offspring.

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8
Q

vertical transfer what basically happens (mutations)

A

genetic info in particular cell is replicated and a copy is transferred to the daughter cell.

  • if there is a mutation in the original cell’s chromosome or a plasmid, that mutant is passed along to the daughter cell…
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9
Q

what are the three mechanisms that mediate horizontal gene transfer

A

transformation, transduction, conjugation

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10
Q

basic run down of transformation

A

cell takes up DNA directly from environment.
– DNA may be incorporated into the host genome or remain separate from the genome as a plasmid.

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11
Q

basic run down of transduction

A

bacteriophage injects DNA that is a hybrid of viral DNA and DNA from previously infected bacterial cell

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12
Q

basic run down of conjugation

A

a conjugation pilis draws two cells close enough to form a cytoplasmic bridge, then DNA is transferred in one direction from donor cell to recipient.
– usually the transfer of plasmid

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13
Q

cells are referred to as what.. when they are capable of taking up DNA and being transformed

A

competent

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14
Q

in naturally transformable bacteria, competence is a regulated multi-step process. explain the steps

A

– free DNA can be found in the environment
– it is taken and brought into the cell
– DNA can be degraded and used as a source of nutrients or it can. be covered by single stranded DNA binding proteins and then incorporated into the chromosome
– this incorporation is through the function of the RecA protein

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15
Q

plasmid DNA can also be introduced to bacterial cells through transformation (through lab) explain

A

cells are made competent by treatment with chemicals – plasmid DNA is added to the cells and taken up by them.

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16
Q

what does ‘rec’ mean in RecA

A

recombination

17
Q

lytic cycle of transduction

A

littler bacteriophage injects its DNA into a host cell,
– there, it directs phage replication, and at the end of replication cycle, host cell. DNA is cleaved into short lenths.

– phage DNA or host DNA can be then packaged into a new generation of phages and is released.

18
Q

what is the transducing particle and what does it do

A

a functional particle capable of infecting another host cell
– injects into the host cell, not its own genome, but the piece of DNA from the previously infected genome.

19
Q

transduction part of the transduction cycle

A

recipient cell is infected by transducing particle, , there will be no virus production bc no virus genome in this cell.
– homologous recombination, incorporation into host’s genome, generating a transduced recipient cell.

20
Q

the proteins that mediate transfer in conjugation are encoded on..

A

the very plasmid that will be transferred called an F plasmid

21
Q

what does the F in F plasmid stand for

22
Q

conjugation step 1

A

sex pilus (F+ donor cell) attaches to recipient cell. the pilus contracts, drawing the cells together to make contact with one another

23
Q

conjugation step 2

A

on strand of the F plasmid DNA transfers from the donor to recipient cell through the cytoplasmic bridge

24
Q

conjugation step 3

A

donor synthesizes complementary strand to restore plasmid, and the recipient synthesizes complementary strand to become F+ cell with pilus.

25
transposition - facts
not unique to bacteria - found in all three domains of life (prokaryotic, eukaryotic, and archaea) -- gene transfer mediated by transposable elements.
26
what are these transposable elements -- description
are discrete segments of DNA that move as a unit from one location in DNA to another by the process of transposition
27
a typical transposon contains:
the transposase gene , surrounded by inverted repeat sequences.
28
basic rundown of what happens in transposition
the transposase gene encodes the enzyme transposase. -- transposase aligns the two inverted repeats, and mediates a recombination event between them. -- the entire transposon is then moved to a different lcoation in the genome, - at the new location, the transposon may disrupt the gene and result in a new phenotype for the cell.