Amino acids and proteins Flashcards

(46 cards)

1
Q

main source of protein

A

muscles

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2
Q

proteins in ear

A

hair cells containing myosin and actin which contracts

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3
Q

protein in eyes

A

with in retinas which have cells containing opsin

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4
Q

opsin

A

have tubes formed across membrane

answer to different waves of light

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5
Q

opsin dependents

A

how narrow or wide pores are in cross sections

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6
Q

B -blue wavelength

A

420nm

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7
Q

G - green wavelength

A

530nm

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8
Q

R - red wavelength

A

560nm

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9
Q

protanopes

A

does not have the protein to show R

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10
Q

deuteranopes

A

does not have to protein to show G

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11
Q

protanomalous

A

R wavelength shifts more towards G

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12
Q

deuteranomalous

A

G wavelength shifts towards R

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13
Q

Protein classes

A

fibrous and globular

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14
Q

fibrous uses

A

insoluble for structure, strength/protective layers
silk web
coating - secreting granules/ seeds/viruses
intracellular cytoskeleton, extracellular matrix

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15
Q

globular

A

soluble - dynamic function

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16
Q

dynamic functions of globular

A
enzymes
transport protein
hormones
defence - antibodies
toxins
in membrane
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17
Q

diversity of proteins

A

one repeating subunit

20 different subunits

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18
Q

one repeating subunit

A

unreactive and boring

such as polyethylene

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19
Q

20 different subunit

A

has many different combination

20
Q

amino acids contains

A

amine
carboxylic acid
R group
central alpha carbon

21
Q

zwitterionic for

A

protonation and deprotonation

22
Q

protonation

A

amine group becomes NH3+

23
Q

deprotonation

A

carboxyl becomes COO-

24
Q

chirality

A

isomers arranged in 2 different ways

25
L isomer
life isomer
26
D isomer
optical/stereoisomer - less common
27
example of chirality - alanine
L-Alanine and D-Alanine
28
R groups
20 different side chain
29
non polar - hydrophobic simplest
cysteine - Cys - C | methionine - Met - M
30
non polar - aliphatic (branched)
valine - Val - V leucine - Leu - L isoleucine - Ile - I cyclic - Proline - Pro - P
31
other non polar
alanine - Ala - A glycine - Gly - G phenylalanine - Phe - F Tryptophan - Trp - W
32
uncharged polar -hydrophilic - OH
Serine - Ser - S Threonine - Thr - T Tyrosine - Tyr - Y
33
uncharged polar - C=O NH2
Asparagine - Gln - Q | Glutamine - Asn - N
34
-ve charged acidic
Aspartic acid - Asp - D | Glutamic acid - Glu - E
35
+ve polar caused by N+
Lysine - Lys - K Arginine - Arg - R Histidine - His - H
36
Cysteine
sometimes polar | weak acid
37
peptide bond
join carboxyl group and amine group by condensation reaction
38
during translation of mRNA
ribosomes provides site for reaction
39
breaking peptide bond
using protease or extreme condition
40
polypeptide
sequence of residue
41
how sequence is described as
N to C
42
estimate molecular mass
no. residue * 110
43
structure name - primary
sequence
44
structure name - secondary
local
45
structure name - tertiary
whole proteins
46
structure name - quaternary
different proteins