mRNA translation Flashcards

(58 cards)

1
Q

translation

A

RNA to protein

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2
Q

protein function

A

metabolism
organisation
structure
development

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3
Q

condensation reaction

A

peptide bond requires a lot of energy forming polymers

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4
Q

location of synthesis

A

cytoplasm in ribosomes

in 5’ to 3’ direction and in N to C direction

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5
Q

ribosome contain

A

RNA and protein - complex enzymes

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6
Q

function of ribosome

A

read mRNA and translate = amino acid sequence and assemble them to form polymer

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7
Q

eukaryotic ribosomes

A

80s containing 60s and 40s

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8
Q

60s

A

> 49 proteins and 3 rRNA

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9
Q

40s

A

> 33 proteins and 1 rRNA

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10
Q

prokaryotic ribosomes

A

70s containing 50s and 30s

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11
Q

50s

A

34 proteins and 2 rRNA

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12
Q

30s

A

21 proteins and 1 rRNA

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13
Q

catalysis for ribosomes

A

rRNA components such as ribozymes

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14
Q

tRNA

A

75 nucleotides long

adopt folded structure with internal base pairing

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15
Q

Ribosome structure

A

E-site - exiting of mRNA
P-site - transcription occurs
A-site - mRNA enters

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16
Q

small ribosomal subunit

A

has mRNA binding site

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17
Q

inactive proteins

A

when one or two bases are added in RNA

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18
Q

active protein

A

adding 3 bases in the RNA

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19
Q

singlet code

A

only gives 4 possibilities

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20
Q

doublet code

A

gives 16 (4(2)) combination

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21
Q

triplet code

A

64 combination (4(3))

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22
Q

quartet code

A

256 combination (4(4))

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23
Q

cracking genetic code in in vitro translation

A

polyu - polyphenylalanine

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24
Q

dinucleotide

A

alternating e.g. UAUAUAUA

either be UAU or AUA

25
trinucleotide
AAGAAGAAG | could be AAG or AGA or GAA
26
tetranucleotide
UAUCUAUCUAUCUAUC | could be UAU, AUC, UCU, CUA
27
experimenting on cracking genetic code | if have 76% U and 24% G
started at random 8 possibilities UUU, UUG, UGU, GUU, GUG, GGU, UGG, GGG likelihood of UUU is 0.76*0.76*0.76 = 44%
28
code - triplet
degenerate, non-overlapping | and no punctuation
29
code of life - table
universal with few exception
30
translation in mitochondria
uses specific ribosomes and different sets of tRNA genes | similar system as chloroplast
31
protein synthesis - initiation in bacteria
ribosome binding site | has shine-Dalgarno sequence complementary 3' end of 16s rRNA
32
protein synthesis - initiation in eukaryotes
starts AUG from 5' has good context ; gcc (A/G)ccAUGG
33
adaptor molecule
amino acids linked to tRNA
34
first amino acid
methionine AUG
35
anticodon
complementary to codon triplet on mRNA
36
charging of tRNA
activation of amino acids | formation of aminoacyl-tRNA
37
activation of amino acid
ATP + amino acid -> amoniacyl adenylate +PPi
38
formation of aminoacyl-tRNA
aminoacyl adenylate + tRNA -> aminoacyl-tRNA + AMP
39
aminoacyl-tRNA synthases
ensure fidelity of addition
40
addition of further amino acid - elongation
translocation peptidyl-transferase activity transfers next amino acid onto growing peptide by condensation reaction
41
translocation
movement of triplets to triplets
42
peptidyl-transferase activity
transferring of the next amino acid
43
mRNA decorating
with many ribosomes (polysomes) | move along message at different points of protein synthesis
44
transcription and translation in bacteria
coupled - occur at the same time
45
transcription and translation in eukaryotes
compartmentalised and then mRNA exported to cytoplasm
46
termination of protein synthesis
stop codons | completes polypeptide chain - released
47
ribosomal subunit after termination
dissociate and go on new round of initiation
48
stop codons
UAA, UAG, UGA
49
mutation missense
change of one base but able to get away with it
50
nonsense
change in base to a stop codon - producing shorter protein
51
silent mutation
change in base but no change in amino acid
52
frameshift base deletion
base deleted - affecting the rest of the chain
53
disrupting - streptomycin
freeze initiation complex and cause misreading of mRNA
54
tetracycline
prevent binding of incoming aminoacyl-tRNA
55
chloramphenicol
inhibits peptidyl transferase
56
erytromucin
binds to 50s and inhibits translocation
57
puromycin
mimics terminals of aminoacyl-tRNA | added onto growing chain causing premature termination
58
one disrupting protein synthesis effect our cells as well
puromycin