biotech Flashcards

(44 cards)

1
Q

isolation of plant cell

A

cellulase for breaking the cell wall

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2
Q

isolation of fungi

A

chitinase for removing chitin

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3
Q

isolation of bacterial cell

A

lysozyme for breaking peptidoglycan

found in saliva, tears

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4
Q

isolation of DNA from protein rna and lipids

A

protease RNAse lipase

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5
Q

isolation of DNA from garbage

A

put it in chilled ethanol, it will float

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6
Q

genetic scissors

A

restriction endonuclease

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7
Q

what gel is used in gel electrophoresis

A

agarose gel (red algae)

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8
Q

charge on DNA

A

negative

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9
Q

which dye is used in gel electrophoresis

A

ethidium bromide

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10
Q

what are the steps for gel electrophoresis

A
  1. put the fragments in a bed containing agarose gel
  2. keep a +vely charged electrode, i.e, anode on the opposite end
  3. the dna fragments being -vely charged will get attracted to the anode and rush towards it.
  4. the smaller fragments will move fast in comparison to the larger ones
  5. once these have settled, put ethidium bromide dye on it
  6. now place a uv lamp near the bed, the dna will be visible as orange fragments.
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11
Q

what is elution

A

the process of separating the gene of interest from the gel

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12
Q

1st restriction enzyme

A

hind II - haemophilus influenzae

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13
Q

what are sticky ends

A

overhanging stretches of nucleotides
form h2 bonds with their complimentary cut counterparts
stickiness facilitates the action of DNA ligase…..

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14
Q

what are recognition sites

A

special sites where the restriction endonuclease cut the dna

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15
Q

what are the features of plasmids

A
double stranded dna
always circular
extra chromosomal
non essential
self replicating piece of dna
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16
Q

2 types of vectors

A

expression vectors

cloning vectors

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17
Q

what are the properties of vector

A

origin of replication- decides the copy number
selective marker
cloning site

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18
Q

how to separate transformant gene from non transformant

A

selective marker

19
Q

name an artificial plasmid

20
Q

what is insertional inactivation

A

inactivation of gene for synthesis of enzymes

21
Q

bacteria that infects plants with TI gene

A

agrobacterium tumifaciens

22
Q

disarmed vector

A

a vector that could earlier harm the host, but cannot do so now. as dangerous gene is destroyed

23
Q

what do retrovirus do

A

convert rna to dna

24
Q

list the bt crops

A
tomato
potato
corn 
cotton- bollworm
rice
25
genes in cotton bollworm
cry I AC | cry II AB
26
genes in cornborer
cry I AB
27
methods of molecular diagnosis
pcr | elisa
28
what is genetic engineering
techniques to alter the chemistry of genetic material
29
what is cloning
the ability to multiply copies of antibiotic resistance gene in E.coli
30
EcoRI
Escherichia coli RY 13
31
what are exonucleases and endonucleases
exonucleases remove nucleotides from ends of the DNA whereas endonucleases make cuts at specific positions within the DNA
32
how does a restriction endonuclease function
1. inspects the length of DNA sequence 2. once it finds its specific recognition sequence it will bind to the DNA and cut each of the 2 strands of the double helix at specific points in their sugar phosphate backbones 3. each restriction endonuclease recognises a specific palindromic nucleotide sequence
33
what is ORI
origin of replication sequence from where replication starts any piece of DNA when linked to the sequence can be made to replicate within the host cells
34
what is transformation
procedure through which a piece of DNA is introduced in a host bacterium
35
what is selectable marker
helps in identifying and eliminating non transformants and selectively permitting the growth of transformants
36
how is a bacterial cell made competitive to take up DNA
1. treating it with specific concentration of a divalent cation such as calcium, which increases the efficiency with which DNA enters the bacterium through pores in its cell wall. 2. rDNA can then be forced into such cells by incubating them w rDNA on ice, followed by placing them briefly at 42°C [heat shock] and then putting them back on ice.
37
what is microinjection
rDNA is directly injected into the nucleus of an animal cell
38
what is biolistic/gene gun
cells are bombarded with high velocity particles of gold/tungsten coated with DNA
39
what is reqd in PCR
template strand DNA polymerase (taq) nucleotides primer
40
steps in pcr
denaturation- the 2 template strands separate at 95°C annealing- primers attach on both the strands when the temperature is lowered to 55°-65°C extension- when the temp is raised to 72°C new strands are formed
41
what are generically modified organisms
plants animals bacteria or fungi whose genes have been altered by manipulation are called genetically modified organisms
42
what is gene therapy
collection of methods that allows correction of a gene defect that has been diagnosed in a child
43
what are transgenic animals
animals that have had their DNA manipulated to possess and express an extra gene
44
how do we benefit from transgenic animals
``` normal physiology and development study of disease biological products vaccine safety chemical safety testing ```