Cell Signaling Flashcards

(50 cards)

1
Q

What are the four main signal transduction pathways that we discussed? What makes one
pathway especially different from the others?

A
  1. GPCRs
  2. RTKs
    - single-pass (one transmembrane segment)
    - Enzymatic activity: tyrosine kinase
    - Binding of ligand causes each receptor to dimerize
    - Dimer formation causes Cross phosphorylation (phosphorylation occurs on tyrosines)
  • Uses Ras (small G protein)
  1. Steroid hormones
    - do not need cell surface receptors
    - go directly into membrane
    - cross plasma membrane on their own
    - bind nuclear receptors in cytoplasm
  2. Notch signaling
    - Activated by binding of Delta -> cleaves Notch receptor
  • Cleavage releases cytosolic tail of receptor -> moves to nucleus (activates Notch-responsive genes)
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2
Q

Indicate types of signaling that are short range versus long range.

A

Short range:
- Paracrine - signal molecules diffuse locally

  • Contact-dependent (e.g., embryonic development)

Long range:
- Neuronal signaling - neurotransmitters
- Endocrine - hormones

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3
Q

What are some examples of signaling molecules (ligands)?

A
  1. Proteins
  2. Peptides
  3. Amino acids
  4. Nucleotides (e.g., cAMP)
  5. Steroids
  6. Fatty acid derivatives (hydrophobic)
  7. Dissolved gases (e.g., NO)
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4
Q

What is an autocrine signal?

A

Cell signals to itself

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5
Q

Compare and contrast cell-surface receptors and intracellular receptors.

A

Cell-surface receptors:
- do not transverse membrane
- signal molecule (hydrophilic)

Intracellular receptors:
- small, hydrophobic signal molecules
- primarily steroid hormones
- receptor in cytosol
- once bound to receptor, it goes into nucleus

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6
Q

What is the difference between immediate outcomes/responses and long time outcomes/responses?

A

Immediate:
- do not require gene expression
- physiological responses that require immediate attention
- e.g., adrenaline

Long time:
- requires gene expression
- associated with cell division, developmental movements of tissues

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7
Q

Give an example of how the same signal molecule can induce different responess in different target cells.

A

Acetylcholine:
- Heart pacemaker cell -> decreased rate of firing (same receptor as salivary gland cell – G-protein coupled receptor)

  • Salivary gland cell -> secretion (same receptor as heart pacemaker cell – G-protein coupled receptor)
  • Skeletal muscle cell -> contraction
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8
Q

What are the three main classes of cell-surface receptors?

A
  1. Ion-channel-coupled receptors
  2. G-protein-coupled receptors - activate membrane-bound, trimeric G proteins
  3. Enzyme-coupled receptors - either act as enzymes or associate with enzymes inside cell
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9
Q

Compare and contrast ECRs with GPCRs

A

G-protein-coupled receptors
- receptor - 7 transmembrane protein
- Trimeric G protein - alpha, beta, gamma subunit
* Beta subunit - always in connection with gamma
* Alpha subunit - has GDP nestled in pocket
* GTP associated with alpha subunit –> G protein dissociates

Enzyme-coupled receptors
- Receptors themselves have enzymatic activity
- Single-pass (one transmembrane domain)
- Functions as dimers
- Inactive - receptors far apart
- Active - receptors come together

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10
Q

How do trimeric G proteins function? Draw an inactive state versus an active state.

A

Three subunits: alpha, beta- gamma (alpha and gamma tethered to PM by lipid tails)

Inactive state: alpha subunit has GDP bound

  • Alpha subunit detaches from By complex
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11
Q

What are second messengers, how do they form? What is the primary messenger? What are some examples?

A

Second messengers - amplify and spread intracellular signal

Examples:
- cAMP
- IP3
- Ca2+
- DAG

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12
Q

What are effector molecules?

A

Proteins that change behavior of cell; have direct effect on behavior of target cell

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13
Q

What type of signaling events are slow? Fast? What are the explanations for this?

A

Slow:
- Cell growth/division
- Explanation: changes in gene expression

Fast:
- Skeletal muscle contraction
- Salivary gland secretion
- Metabolism
- Explanation: Signal affects activity of proteins already present inside target cell; do not involve changes in gene expression

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14
Q

What is a molecular switch? What are two examples? How do they influence a signaling event?

A

Molecular switch - intracellular signaling protein that switches from an inactive to an active state

1.Phosphorylation/dephosphorylation

  1. GTP-binding proteins (Small G-protein) - toggle between active state (GTP bound) and inactive state (GDP bound)
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15
Q

What proteins regulate a molecular switch? Hint: there are two important ones.

A

Protein kinase and protein phosphatase

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16
Q

Explain how acetylcholine can slowdown heart rate, but also induce a muscle contraction.

A

Different type of receptor protein

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17
Q

How do G proteins shut themselves off?

A

Alpha subunit has intrinsic GTPase activity -> hydrolyzes bound GTP

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18
Q

Which is the shortest range signal transduction pathway? How does it function?

A
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19
Q

GPCR superfamily

A
  1. Rhodopsin
  2. Olfactory receptors in nose
  3. Single-celled yeast mating receptors
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20
Q

How does acetylcholine reduce heart rate?

A

Acetyhcoline binds to GPCR on surface of heart pacemaker cells

By-complex dissociates from alpha-subunit and bind K+ channel in plasma membrane, forcing it open

K+ channel allows K+ to flow out of cell

Results in a more polarized membrane making it harder to electrically activate

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21
Q

cAMP is synthesized by ____________ and degraded by _____________.

A

adenylyl cyclase; cyclic AMP phosphodiesterase

22
Q

cAMP is activated by adenylyl cyclase. What switches on adeneylyl cyclase?

A

Activated G protein a-subunit

23
Q

Adenylyl cyclase activates cAMP. What does cAMP activate?

A

cAMP-dependent protein kinase (PKA)

24
Q

What is the function of cyclic AMP phosphodiesterase?

A

Degrades cAMP

clips ring from cAMP –> becomes AMP (does not have amplifying activity)

25
Why does caffeine act as a stimulant by blocking cAMP phosphodiesterase?
26
Skeletal muscle
Epinephrine signaling leads to rise in cAMP Activated andelyly cyclase takes ATP to make cAMP cAMP activates PKA PKA phosphorylates (activates phosphorylase kinase) Phosphorylase kinase activates glycogen phosphorylase - breaks down glycogen Glycogen breakdown → increase in glucose levels PKA also inhibits enzyme that drives glycogen synthesis
27
PKA
Involved in activating targeted genes Goes into nucleus and activates transcription regulators Move from cytosol into nucleus to phosphorylate and activate transcriptional regulators
28
What are two ways a response can be terminated in ECRs?
1. Tyrosine phosphatases 2. Get rid of ligand
29
Explain the role of Ras in ECRs.
Two conformational states: 1. Inactive: GDP is bound 2. Active: GTP is bound - Ras-GEF - activates Ras; encourages Ras to exchange its GDP for GTP - Ras-GAP - hydrolyzes GTP to GDP; switches Ras off - Activates MAP kinase kinase kinase
30
What are examples of RTKs that activate Ras?
1. PDGF receptors - mediate cell proliferation in wound healing 2. NGF receptors - play an important role in the development of certain vertebrate neurons 3. EGF receptors - stimulate cell growth and differentiation
31
What are mitogens?
Extracellular signaling molecules that stimulate cell proliferation (promotes cell division/mitosis)
32
MAP kinase cascade
Ras -> activates MAP kinase cascade MAP kinase kinase kinase -> phosphorylates and activates MAP kinase kinase MAP kinase kinase - > phosphorylates and activates MAP kinase MAP kinase phosphorylates effector proteins
33
What is the importance of Notch signaling?
Controls development of sensory neurons in flies
34
What is lateral inhibition in Notch signaling?
when a precursor cell commits to becoming a neural cell, it signals to its immediate neighbors not to do the same, and inhibited cells develop into epidermal cells instead
35
Explain the process of Notch signaling.
Notch is cleaved Piece of it goes from plasma membrane and into nucleus (becomes transcriptional regulator)
36
The Notch receptor functions as a _____________.
Transcriptional regulator
37
What category of signaling is Notch signaling?
Contact-dependent signaling
38
What are local mediators?
Secreted molecules that act only on cells in local environment of signaling cell
39
What are the two types of GTP-binding proteins?
1. Trimeric G proteins - relay messages from GPCRs 2. Monomeric GTPases - aided by GEFs and GAPs
40
What are the two main types of protein kinases that operate in intracellular signaling pathways?
1. Serine/threonine kinases - phosphorylate proteins on serines or threonines 2. Tyrosine kinases - phosphorylate proteins on tyrosines
41
GEFs - promote exchange of GDP for GTP (switches protein on) GAPs - stimulates hydrolysis of GTP to GDP (switches protein off)
42
Describe the common structure of GPCRs.
Polypeptide chain traverses membrane as seven alpha helices Cytoplasmic portions of receptor bind to G protein inside cell
43
Where is the G protein located in relation to the GPCR?
Cytosolic side of plasma membrane
44
Is the trimeric G protein complex active when assembled or disassembled?
Disassembled
45
What are RTKs important for?
cellular growth, proliferation, differentiation, survival and development
46
What is signal transduction?
Process whereby one type of signal is converted into another (target cell converts an extracellular signal into an intracellular signal
47
What are receptors?
Proteins that recognize and respond to specific signal molecules
48
Relay - helps spread signal through cell Amplify - makes signal stronger (e.g., second messengers) Feedback - adjusts response to an extracellular signal 1. Positive - enhance response 2. Negative - reduce response
49
What happens when there is a mutation in Ras?
Inactivates GTPase activity of Ras = protein cannot shut itself off (promotes uncontrolled cell proliferation and development of cancer)
50
What second messengers does phospholipase C generate?
Inositol triphosphate (IP3) and diaclglycerol (DAG)