Chapter 2 Flashcards

(40 cards)

1
Q

Maximal Attraction

A

The distance b/w atoms that is ideal

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2
Q

In regards to pH levels, who dissolves better in water?

A

Stronger Acids/Bases

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3
Q

What is the goal of a weak acid?

A

To donate its proton

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4
Q

2 main characteristics that make functional groups polar

A

Hydrogen bonding

Permanent Dipole

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5
Q

What is Polywater?

A

Water with higher boiling point, freezing point and higher viscosity

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6
Q

How many H-bonds can Water donate and accept?

A

2 (4 in total)

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7
Q

Hydrophobic Effect

Non-Polar Groups want

A

drive formation of Higher order structures away from water

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8
Q

Electrostatic interactions can be what?

A

Attractive or repulsive

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9
Q

How many H-Bonds will one water molecule form?

A

3 1/2

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10
Q

Hydrophilic

A

Water loving

Polar

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11
Q

Hydrophobic Interactions

A

Forces the hold of non-polar regions together

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12
Q

Why is water “active”?

A

Participates in many biomolecule reactions

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13
Q

What is an electrostatic interaction?

A

Has both a donor and acceptor

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14
Q

Van der Waals

A
  • Induced dipoles b/w atoms

- Consequence of their interactions with other atoms

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15
Q

Non-covalent interactions enable what?

A

Transient, dynamic interactions

Felxibility of structure

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16
Q

What does strength depend on?

A

Its geometry

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17
Q

What does the dipole of water influence?

A

Forms electrostatic interactions with charged molecule

Form Hydrogen bonds

18
Q

Heat vaporization

A

Amount of heat required to vaporize a liquid

19
Q

What results in an increase of entropy?

A

Release of ordered water molecules

20
Q

What does it mean when a molecule has a greater number of H-Bonds?

A

Higher heat capacity and higher heat of vaporization

21
Q

Non-Covalent interactions within biomolecules include

A

Hydrogen bonds
Ionic (electrostatic) interactions
Hydrophobic interactions
Van der Waals interactions

22
Q

Which molecule is more Electronegative?

A

Oxygen because it has a permanent dipole

23
Q

How are interaction between biomolecules determined?

A

Non-covalent interactions

24
Q

What does the solubility of water depend on?

A

The ratio of polar to non-polar groups

25
Why can a weaker H-Bond could be better?
Because of it's flexibility but it depends on its biological goal
26
Hydrogen bonds are an example of what?
Electrostatic interactions
27
Why does Adenine and Tymine bond together?
Its H-Bonding capabilities Adenine is an acceptor Thymine is a donor
28
Amphipathic
Contain both Hydrophilic and Hydrophobic portions
29
What does the Henderson-Hasselbalch Equation describe?
Relationship between pH of solution pka of the weak acid The relative concentration of the weak acid
30
Specific Heat Capacity
Heat required to raise the temp of a substance by one degree
31
What are H-Bonds critical for?
Interactions but not the formation of structures
32
When does a solution best resist changes in pH?
pH=pka
33
Hydrophobic Effect | Polar Groups want
To create structures that optomize chance of interactions w/ water
34
Functional Groups w/ H-bonding capacity will form bonds with what?
Water molecules Intramolecular Intermolecular
35
Non-Covalent forces influence what?
Formation and stabilization of structures Recognition/Interactions b/w biomolecules Binding of reactants to enzymes
36
Packing Interactions
Atoms have personal space that they want to respect | Want to be close but not too close
37
Hydrophobic
Water Fearing | Non-polar
38
How do Oxygen and Hydrogen differ?
Electronegativity
39
How does a molecule have the greatest chance of solubility of water?
Has a positive or negative charge and/or has H-Bonding capabilities
40
Why is water "passive"?
Structure forms in response to interaction with water