Chapter 3 Flashcards

(62 cards)

1
Q

cytoplasm

A

gel-like network made of proteins and other macromolecules

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

cell membrane

A

encloses the cytoplasm. The structure that defines the existence of the cell.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

cell wall

A

covers the cell membrane, b/w inner and outer membrane.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

nucleoid

A

non-membrane bound area of cytoplasm w/ chromosome in the form of looped coils

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

cell membrane made up of

A
•Double layer of phospholipids
• Proteins embedded in membrane
-Anchor membranes to envelope
-Sense the outside world
-Transport materials into cell
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

cell membrane functions

A
• Mechanical boundary
• transport nutrients/waste
• Site for electron transport chain
-Respiration
-Photosynthesis
• Contain (“sensing”) receptor proteins
• Most membrane proteins (~80%) are integral, the rest
are peripheral
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

most membrane lipids are

A

phospholipids. Phospholipids are amphipathic = have a polar and non-polar end.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

proteins float in

A

2-dimensional “sea” of phospholipids. membrane fluidity is required.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

increase membrane fluidity

A

• Use lipid molecules with shorter chain lengths and that have more double bonds (unsaturation)– adds “kinks”

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

• Decrease membrane fluidity (increase rigidity)

A
• Use longer chain lengths (Van der Waals)
• Use fewer double bonds
• Use molecules that hinder movement of phospholipids
-Stiff planar rings
-Reinforcing agents
-Sterols (e.g.) cholesterol
     -Eukaryotes
-Hopanoids
     -Structurally similar to steroids
      -Prokaryotes
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Bacteria would adapt to increasing

temperature by?

A

Increase # of long chain lipids, decrease # of double bonds.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

proteins form about

A

half the mass of the membrane

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Transport across the cell membrane

A
  • The cell membrane acts as a semipermeable barrier
  • Selective transport is needed for survival
  • weak acids/bases can cross membrane
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

diffusion

A

Small uncharged molecules, like O2 and CO2, permeate the membrane

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

transporters

A

pass material into and out of cell

• Polar/charged molecules need transport

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

concentration gradient

A

always going from high to low.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

passive transport

A

molecules move along their concentration gradient

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

active transport

A

molecules move against their concentration gradient

• Requires energy

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

How do prokaryotes protect their cell membrane?

A

cell envelope includes structural support (cell wall.)
-some have S-layer
• prokaryotes like mycoplasmas have cell membrane w/ no outer layers

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

sacculus

A

bacterial cell wall w/ single interlinked molecule that covers cell.
• cage-like structure (flexible)
• has shape and withstands intracellular turgor pressure

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

Most bacterial cell walls are composed of

A

peptidoglycan (murein)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

glycan chains

Long polymers of two disaccharides:

A

• N-acetylglucosamine (NAG) and N-acetylmuramic acid (NAM)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

Peptidoglycan

A

polymer of peptide-linked chains of amino sugars. unique to bacteria. good for antibiotics.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q

Gram-positive-
gram negative-
Mycobacteria-

A

– thick cell wall (e.g. firmicutes)
– thin cell wall (e.g. proteobacteria)
– multilayered envelope w/ defensive structures like mycolic acids (e.g. Mycobacterium tuberculosis)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
25
gram positive cell envelope
``` • S-layer -Made of protein (contains large pores) • Thick cell wall (3-20 layers of peptidoglycan) • teichoic acids for strength • Cell membrane ```
26
gram negative cell envelope
• Outer membrane (OM) -Covers peptidoglycan layer -has defensive abilities and toxigenic properties • Thin peptidoglycan layer (1-2 sheets) • Periplasm – area b/w membranes(cell wall)
27
• Inward facing leaflet of OM (gram neg.)
has lipoproteins that connect OM to peptide bridges of cell wall
28
• Outward facing leaflet of OM (gram neg)
has lipopolysaccharide (LPS) (endotoxin)
29
Mycobacterial cell envelope
-has features of both gram-positive and gram negative | • Unusual sugars -arabinogalactans
30
in e coli, the cell membrane is called the
inner membrane. contains phospholipids, transporter proteins, and more molecules.
31
nucleoid is not
enclosed by membrane.
32
essential ions
potassium, magnesium, chloride ions
33
nucleic acid content of bacteria
8% for e coli
34
leaflets
two layers of phospholipids in the bilayer
35
cardiolipin
double phospholipid linked by glycerol
36
hopanoids
cyclopentane
37
membrane lipids of archaea differ from bacteria and eukaryotes bc
instead of ester link, there is ether link (C-O-C)
38
The E. coli nucleoid
appears as clear regions that exclude the ribosome and has DNA strands
39
domains
nucleoid forms about 50 loops
40
within each domain
DNA is supercoiled and compacted by gyrases and DNA-binding proteins
41
the ribosome is a target for
antibiotics
42
Protein synthesis and secretion
• In prokaryotes, membrane/secreted proteins are synthesized together w/ cell membrane -signal recognition particle (SRP), which binds to the growing peptide
43
replisome includes
leading strand and lagging strand
44
septum
-DNA termination site. divides envelope. seals off the two daughter cells
45
* If septation occurs in: * Parallel planes- * Random orientations- * Right angles to the previous division-
- cells form chains (Streptococcus) - cells form compact hexagonal arrays (Staphylococcus) - cells form tetrads and cubical octads (sarcinae)
46
Thylakoids
folded intracellular membrane • has layers of folded sheets (lamellae) or tubes of membranes packed w/ chlorophyls and electron carriers
47
Carboxysomes
polyhedral bodies packed w/ enzyme Rubisco for CO2 fixation
48
Gas vesicles
increase buoyancy
49
Storage granules
* Glycogen, PHB, and PHA for energy | * Sulfur, for oxidation
50
Magnetosomes
* Membrane-embedded crystals of magnetite, Fe3O4 | * Orient the swimming of magnetotactic bacteria
51
Pili or fimbriae
– straight filaments of pilin protein | • Used in attachment
52
stalks
extensions of cytoplasm | • Tips secrete adhesion factors called holdfasts
53
nanotubes
intercellular connections that pass material from one cell to the next
54
Peritrichous cells
(ex E. coli, Salmonella) have flagella randomly distributed around the cell • Flagella rotate together in a bundle behind swimming cell
55
Lophotrichous cells
(ex Rhodospirillum rubrum) have flagella attached at | one or both ends
56
Monotrichous cells
(ex Caulobacter swarmer) have a single flagellum on | one end
57
Chemotaxis
movement of a bacterium in response to a chemical | gradient
58
• Attractants cause CCW rotation
* Flagella bundle together * Push cell forward * “Run”
59
• Repellants cause CW rotation
* Flagella bundle falls apart * “Tumble” * Bacterium pauses, then changes direction
60
"random walk"
The alternating runs and tumbles causes this
61
bacteria do not undergo
mitosis or meiosis
62
origin of replication
at the midpoint on dna. Attached to the cell envelope at a point on the cell’s equator